Epinephelus fuscoguttatus (brown-marbled grouper): 125894548
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Entry
125894548 CDS
T08419
Symbol
pcdh11
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125894548 (pcdh11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
efo01009
]
125894548 (pcdh11)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efo04515
]
125894548 (pcdh11)
Protein phosphatases and associated proteins [BR:
efo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125894548 (pcdh11)
Cell adhesion molecules [BR:
efo04515
]
Cadherins
Protocadherins
125894548 (pcdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
DUF6249
Motif
Other DBs
NCBI-GeneID:
125894548
NCBI-ProteinID:
XP_049441972
LinkDB
All DBs
Position
LG9:21763065..21928962
Genome browser
AA seq
1266 aa
AA seq
DB search
MDLASQAHALVVLLTCVVVLCRAQERDYTVKEEQPENVRIGNLRKDLDLNLDPNIRLSSP
LQFKPVYKTGDVPLVRVEANTGEIFTTNHRIDREKLCSGVFAEKRCYYEIEVAVLPDEIF
RLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGNPPKSSTAILQVTIS
DVNDNRPVFKDSELEVTVPENAPMGTSVAQLHASDADLGSNAQIHFAFSNQISASTKRHF
AIDSSTGLITVKQPLDREVTPVHKLIVLASDGSSTPSRATVIVNVTDVNDNVPSIDTRYI
INLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENND
PSTQLIKISATDADSGHNAEIIYTLGPDAPDGFNIDRRSGILSVGKRLDREKQERYSFTV
IARDNGSTSLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAG
DNAIITLSVLNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAVDGGQPPSSSYAKVT
INVVDVNDNRPVFVIPSSNYSYDLVRTTTTPGAVVTRVFAIDNDTGMNAELQYSIISSII
ITSRVSPRGLFAIDKTTGNITLQEKIVAADQGLHRLVVKVKDLGQPESLHAIALIHLFVN
DTVSNATFIQEQLRKSMETPLDRNIGDSEVTPQANGYVIVVIAIIAGTMTVILVIFVTAL
VRCRQTPRHKVVQKGKQSGEWVSPNQDNRQIKKKKKRKKRSPKSLLLNFVTIDESKPDDP
THEHVNGTLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPV
APKKHHVIQELPLDNTFVVGCDSLSKCSSTSSDPYSVSECSCQGGFKTAGQITTRQNLSQ
TPEKSFNSPPPICPHKEACQLGKITSVNTQRRVTFHLPDGSQESCSDSGLGDPEPSSTAS
TTQPLPLSFPQEEYYEQTSPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILGH
SDSCWMPPALAQFQGSGNNSPTSTPITTAIAGTMPSFGFQQSCARGAKANMMSMGVMDGR
HTLGRSVPKKDELDKGISRPQFYNTLDRHCSKKEDPVKVIPLASFSSPGQQTPGGGSSSF
LHEHQL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggacttagcaagtcaggctcatgcgctggtggtcttgctcacctgtgtggtcgtgcta
tgccgggcccaggagagggactacacggtgaaggaggagcagccggagaacgtccgcatc
gggaacctgcgcaaggacctggacctcaacctggaccccaacatcaggctatcctcaccg
ctgcagttcaagcctgtgtacaagacaggtgacgtgcctttggtgagggtggaggccaac
acgggggagatctttaccaccaatcacagaatcgaccgggagaagctgtgttcaggggtc
ttcgctgagaaacgctgctactatgagattgaggtggccgtgctgccggatgagatcttc
cggttggtcaagatccgcttcctgatcgaggatgtaaatgacaacgcgccccttttccag
tccactgtaataaacatctccatcccggagaacacagccatcaacacccgatacccggtg
ccctcagcgtttgaccctgatgtagggatcaatgggattcaacactatgaactggtcaag
agtgtcagcgagtttggtttagacatcatcgagacccctgaaggcgacaagtggccgcag
ctcatcgttcagcagaacctggatcgcgagcagaaggacaccttcgtcatgaagataaag
gtagaggatggtggcaacccccccaagtccagcaccgccatcctccaggtcaccatctcc
gacgtcaacgacaatcgtcccgtcttcaaggacagcgagctggaggtcaccgtgccggag
aacgcgcccatggggacatctgttgctcagcttcacgcctcggacgcagacctgggttcc
aacgcacagatccacttcgctttcagcaaccagatctctgcctcaaccaaacgtcacttt
gccatcgacagctctacgggactgatcactgtgaagcagccactggacagggaggtaact
cctgttcacaaactcatcgtcctcgccagcgatggcagctccactccctccagagccaca
gtgattgttaatgttacagacgttaatgacaatgttccctccatagacactcgctacatt
atcaacctggttaatgggactgttctgctctctgaaaatgcacctctcaacaccaaaata
gccctcatcactgttactgacaaggatgcagatctttatggcaaagtagcttgctacact
gaccatgatgttccttttcggttgaagcctgtctttaatgatcaatttttactagagaca
gctgcccccctagattatgagacgactcgagaatatgcaattaagatagtggcctcggat
agggggacgcctcctttgaacacttcagctatggttttaattaaaatcaaggatgagaac
gacaatgcacccatcttcccccagccggaaatccaactttccataccggagaacaatgac
ccctctacgcagttaataaaaatcagcgccactgacgcagacagcggacataatgctgag
attatttatactcttggccctgatgcgcctgacgggtttaacatagacagacggtcagga
attctctccgttggcaaacgactggacagagagaagcaggagaggtactcattcactgtc
atagcgagggacaatggctccacgtccctgcagagcaatgtcactgtcaggctaatcgtc
caggaccttaatgacaacagcccagctttcacacaccctgagtacaacttctatgtgcct
gagaacctgcctctctatggaaccgtgggcttaatcacagtgacggacgcagatgctgga
gataatgcgattataaccctgtctgttttgaacgggaaagataatttcatcatcgaccct
caaaccggtgtgatcaaacccaatatcacctttgatagggagcagcaaagctcctacaca
tttatggtcaaagctgttgatggggggcaacctccaagctcctcctacgccaaggtcact
atcaatgtagtcgacgtgaacgacaatcgccctgtgttcgtcatcccgtcctccaattac
tcatatgacctagtgcgaaccaccaccacccctggcgctgtggtcaccagagtgtttgcc
attgacaatgacacaggtatgaatgctgagctgcagtacagcattatcagcagcatcatc
atcacatctagggtctcccctcgaggtctctttgccatcgacaaaacaacgggtaacata
acactgcaggagaaaatagtggcagctgatcaggggctgcataggctggtagtcaaggtc
aaagatctaggccagcctgagtcattacacgccatcgcacttattcacttgtttgtcaat
gacactgtgtcaaacgctacctttatccaagagcagcttcgaaaaagtatggagacaccc
ttggatcgtaacataggggacagtgaggtaacacctcaagccaacggatacgtgattgtt
gtgatagcaatcatagcagggaccatgactgtcatcttggtgatatttgtgactgccttg
gtgcggtgccgacagacacccagacacaaagtggtgcagaagggcaagcagagtggcgag
tgggtgtcacccaaccaagacaaccgtcagatcaagaaaaagaagaagagaaagaagcga
tcccccaagagtctcctcttgaactttgtgaccatagatgaatccaagcctgacgacccc
acacatgagcatgttaatggcacactggatctccctgtggagttagaggagcaaaccatg
gggaagtacaactgggccaccacgcccaccaccttcaaacccgacagcccagatttagcc
aagcattacaagtccgcgtcccctcagcctacatttcaaatcaaaccggagactccagtg
gccccaaagaaacaccatgtgatccaggagctccccttggacaacacgttcgtggtgggc
tgtgactcactctccaagtgctcatcgactagctccgacccgtacagtgtctcagagtgc
agctgtcaggggggattcaagactgcggggcaaatcaccacccgacagaacctgagccag
acaccagagaagtcttttaactcgccgccccccatttgtcctcataaggaggcctgtcaa
cttggcaagataacctctgtgaatacccagcgccgcgtgacgttccatcttccagacggt
tcccaggagagctgcagtgacagcggactgggagacccggaacctagcagcacggccagc
accacccagcctcttcccctcagcttcccccaggaggagtactatgagcaaacatcacct
aacagccgcaccgagggagacgggaactcagaccctgaatctaccatcgaggtgaacctg
cagaaagccttggctgaggcctctgagacctgtacccaggagtgtctgatactgggccac
tccgacagctgctggatgcccccagccctggcccagttccagggttctggcaacaacagc
cccacctccacccctatcaccactgcaatcgccggtacaatgccctcctttggcttccag
cagagctgcgcccggggagccaaagctaacatgatgagcatgggggtcatggatggtcgc
cataccctgggcaggtctgtgcccaaaaaagatgaactggacaaagggatcagccgcccg
cagttctacaacaccctggatagacactgcagtaagaaggaggaccccgtcaaggtcatc
cccctggcgagcttctcctcccccgggcagcagacgcccggcgggggtagcagctctttc
ttacacgagcaccagctgtaa
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integrated database retrieval system
