Epinephelus fuscoguttatus (brown-marbled grouper): 125894566
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Entry
125894566 CDS
T08419
Symbol
col23a1a
Name
(RefSeq) collagen alpha-1(XXIII) chain
KO
K24355
collagen type XXIII alpha
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
efo00536
]
125894566 (col23a1a)
Glycosaminoglycan binding proteins [BR:
efo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125894566 (col23a1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
125894566
NCBI-ProteinID:
XP_049442015
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All DBs
Position
LG9:26157903..26326097
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AA seq
624 aa
AA seq
DB search
MDTASDSIGESKPVCQCAPKSAVQRWLPGFPIALCMLMSLSSITVCLLMSLKTHQLENRL
QMEMDKASIFQPPHRACLNEDGTLIPELSTSVGRLVEEKVGVLLPKSRTTRDAGQECSCP
PGPPGKRGRMGRRGEPGPPGKAGRDGYPGPLGLDGKPGFPGPKGSQGPAGPKGEKGDQGD
IGPRMVFPRYDHGFLSGEQSSSFQRRFLKGDQGQAGPAGPPGPPGPPGPRGPPGNTGKDG
PRGPAGEPGFPGRDGVEGPQGLPGKPGEDGEPGYPGPQGPPGAKGEAGMGEKGERGMDGI
PGFKGDKGESGEQGPQGPMGYPGEKGATGSSDIIDFNGKLLDAFQAINTISVSGPPGPPG
PPGPSGEKGELGLPGPAGVDGEKGPKGDMGETGPPGERGEKGEMGLSGPTGMDGHKGEKG
DCRMDDNLVQMISQPGPPGPPGPPGVPGSPGSMGLHGMPGPKGEPGFGIKGEKGDLGAPG
PRGLDGGPGLTGPAGLVGLPGAKGEKGRPGEPGLDGFPGLMGEKGDRGERGDKGDRGGVG
KRGLKGQKGEQGPPGLDQPCPVGCDETKGVSEEAGLSSAPPPPLPPSGPEAPCPVGQDGL
PIPGCWHKEEMARQKLKRKRLSQP
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggatacagccagcgactctatcggggaaagtaagccggtatgtcagtgtgctccaaag
tccgcggtccagcggtggcttccaggttttcccatcgctctgtgcatgctgatgtccctg
agctccatcaccgtgtgtcttctgatgagcctcaagacccaccagctggagaaccgactg
cagatggagatggacaaagcgtctatcttccagccgccgcacagggcttgtcttaacgag
gatgggaccctaattcctgagctgagcacttcagtggggaggctcgtggaagagaaagtg
ggggtgctgttgccgaaatcaaggacgactagggatgctggccaagagtgctcctgtcct
ccaggacctccaggaaagcgtggaagaatgggaagaagaggcgaacctggacctcctggc
aaggctggacgggatggatacccgggtcctcttggcctggatgggaaacctggttttcca
ggtcccaagggaagccagggaccagccggacccaagggagaaaagggtgaccaaggagac
attgggccaaggatggtcttccccagatatgaccatggttttctctctggagagcagtcc
agtagctttcagagacgctttctgaagggtgaccaaggccaggctggacccgctggtcct
cccggtcccccaggtccccctggcccccgaggcccccctgggaacacaggcaaggatggc
ccacgtggccctgctggcgagccgggttttccaggtcgtgatggtgtagaggggccacaa
ggattgcctgggaagccgggagaagatggtgagcccggctatccaggaccacagggtcct
ccaggagcaaagggcgaggcaggtatgggagaaaaaggagaaagaggcatggatggaatc
ccaggattcaagggggacaaaggggaatcaggagagcaaggaccacagggacccatgggt
tatcccggtgaaaaaggcgccacaggctcctcagacatcatcgacttcaacgggaagctt
ctagatgctttccaggccatcaacaccatcagtgtttcgggcccacctggaccacctgga
cccccaggcccgtcaggagaaaagggtgaacttggtttacctgggcctgcaggagtcgat
ggggagaagggacctaaaggtgacatgggtgagacaggacctcctggcgagcggggagag
aagggagagatggggctgtctgggcctactggtatggacggacacaaaggagagaaaggc
gactgcagaatggatgataacttggttcagatgatctcccagccaggcccacctggccca
cctggcccaccaggagtccctgggtcccctggatctatggggctgcatggaatgcctggt
cctaagggtgagcctggatttggaataaagggagagaagggggacttgggtgctcctgga
cccagaggattagacggtggcccaggcttaactgggcctgcagggttggtgggtcttcca
ggtgcgaagggagaaaaaggcagaccaggggagcctggactagacggtttcccaggcctg
atgggagagaaaggtgaccgaggggaaagaggagataagggtgacaggggaggagtggga
aagaggggtctaaagggccagaagggagagcagggtcctccaggcttggaccagccttgt
cctgtgggctgtgatgagactaaaggtgtgtctgaggaggcagggctttcttccgctcca
cctccacctcttcctccttctggccctgaggccccctgtcctgtgggacaagacgggctg
cccataccaggctgctggcacaaggaggaaatggcaagacagaagctcaaacgcaagcgt
ctctctcagccctaa
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