Epinephelus fuscoguttatus (brown-marbled grouper): 125894793
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Entry
125894793 CDS
T08419
Name
(RefSeq) protocadherin-12-like isoform X1
KO
K16499
protocadherin delta 2
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efo04515
]
125894793
Cell adhesion molecules [BR:
efo04515
]
Cadherins
Protocadherins
125894793
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
TMEM154
DUF5527
Motif
Other DBs
NCBI-GeneID:
125894793
NCBI-ProteinID:
XP_049442371
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Position
LG9:complement(3596680..3621245)
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AA seq
1176 aa
AA seq
DB search
MMLLALLLVLSLCSDARSTEPSSITIQYRVWEEQPTGTRVGRLVDDLRQRDESGLLEDFQ
VVEHGKALPFSVSTRDGVVSTQGRLDREELCRGSDLCELAFSVLYRKSGAVNCLRVRVEV
MDLNDHSPSFPSTLQEVEISETASLRMRIPLDRAVDPDAGPNSLQTYSLSVNQHFALDVT
VAPGGTKQAELVVIKELDREVQDTFDLILVAWDKGNPPRSGSTLVRVNIQDSNDNSPVFE
DSTPTVELSEDTARGTTIINLKATDPDQGANGEVEYSLSKHTRPEVQRLFYVDPQSGAVS
LKAPLDYEAQPSYEVIIQARDRGPNAIPTHCKLHVKLQDVNDNAPRIHMTWTPPNSPVAT
VLEGAPLDTFLALVMVSDADSGENGKVRALIQEESGPFRLKRIHGDNYMIVTDGSLDREK
VMQYNITLLAQDYGDPPLSCVKHLPVHVLDENDNAPVFSTSLYKASVKENNVAGLHALKV
EAHDVDLEFSGRVSYFIRNPNKVETDTESFSINPTSGVISVQRPLDYEESRSYSFMVEAV
DQGHPPLTSTASVQIDIQDVNDNYPVIKEPKPRKGVASLSVPVNTDKGEIVTELGNDTEE
DSTPSPINHLVREGLVGFLASTIKAEDPDSGLNGQLSYLITDGNPDGLFWLDQMTGQLFV
NTTNATELIGKTFKVNIAVSDMGTPSLSTKATLEVTFINLRDHLKNSSPGTRGQLSFTMM
MAICLGATCLLLLLAIALVTTFCRPEKRDSRAYNCRQAESTYTRHPRRPQKNIRKSDIQL
IPVIRGRKEEPLEDDSEAQPLAPPPMVSDDPQTDRQYTLTPSVMNTSFHSQGYPEGDQPA
THYSKTLRKPGNIELDGTLPLTPASSYRSLRKARNPSSSSSVSHSSTLKRQAHAGGEEAE
RLSSSSQATLRRPRTSEGRGGPDAEHRQMLRNLVRLSMAAFGDSIELSSASPEVQQISQL
LSLLRQGQLQPRPNFRGNKYSHRNGRYGGQDCSDWQSTKDSGHGESEAGDVDWEPGRDSP
IDPQLEEGLNHLLNHPDDVFSEVNDPAWMARLSLPLTSDYHDNVFVPNGPPSTDSELLPR
DALDSSSFSTFGKSPEKDGPLGGALLSEVSTLFEMLMTQKADSHPGPRPDVLYRLSAAYR
RSLGLDANAPTAAGNTQRNSGNTEKRSGLAAPSGLY
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgctggctctgcttctggttctgagtctctgctctgacgctcgctccaccgag
ccgtcatcaataactatccagtaccgggtttgggaggagcagccaacgggaacccgggtc
ggccggctggtcgatgacctccggcagagggatgaaagcggcctcctggaggatttccag
gtggtggagcacgggaaagcccttcccttctccgtcagcactcgagacggggtcgtctcc
acccagggccggctggacagggaggagctgtgccgtgggtcggacctttgcgagctggcc
ttcagcgtcctctacaggaaaagtggagctgtgaactgcctgcgagttcgcgtggaggtg
atggacctgaacgaccacagtcccagcttccccagcacgctgcaggaagtggagatttca
gagacagccagcctcaggatgcggatccctttggaccgggcggtggatcctgacgcgggg
ccaaacagccttcaaacctactcgctgtccgtcaaccaacattttgctctggacgtgaca
gtcgcaccaggtgggaccaaacaggcagagctagtggtgatcaaagagctggacagggag
gttcaggacacgtttgacctcatcctggtggcgtgggataaagggaacccacccaggtct
gggagcacgttagtgcgtgttaatattcaggactcaaatgataacagcccagtgtttgag
gacagcacccctactgtggagctatctgaggatacagcccgagggacaaccatcatcaac
ctcaaggccactgacccggaccagggggccaatggggaggtggagtattcactcagtaag
catacccgcccagaggtacagagacttttctatgtggacccacaaagtggagctgtgagt
ctcaaagctcctctggactatgaggcccagccctcttatgaagtcatcatccaggcccgt
gaccgcgggcccaacgccatccccacacactgcaaactccacgtgaagcttcaagatgta
aacgacaatgccccgaggatacacatgacctggactccacccaactcacctgtggccact
gtgctggaaggagcacctctggacaccttcctggctctggtgatggtgtctgatgccgat
tcaggagaaaatggcaaagtgagggcgctcattcaggaagaatcaggccctttccgcctt
aaacgcatccacggtgacaattacatgattgttacagacggcagcctggatcgagagaag
gtcatgcagtataacatcacgctgcttgcccaggattacggagatcctccgctgtcttgt
gttaaacacctgcctgtccatgttctggatgagaatgacaacgctccggtgttctccacc
tccctctacaaggcctccgtcaaggaaaataatgtggcaggcctccatgccctcaaagtt
gaagcccacgatgttgacctggagttcagcggcagagtgtcctacttcatacgcaacccc
aacaaagtggaaactgacaccgaatctttttccatcaatccgaccagtggagtcatcagc
gtccagcgtcctctagactacgaggaatcccgctcctactctttcatggtggaggcagtt
gaccagggtcatccgcctctcaccagcacggcctctgtgcaaatagacatccaggatgtg
aacgacaactaccctgtcatcaaggagccaaagcccagaaaaggtgtggcttctctcagt
gtacctgtcaacacagacaagggggagattgtgacggagctggggaatgatacagaagag
gactccaccccttcgcccatcaatcacttggtcagagagggacttgttggattccttgca
tccaccataaaggcagaggacccagactcggggctgaacggacagctcagctacctcatc
acagatggaaaccctgatgggctgttctggttggatcagatgacaggccagctgtttgtt
aacaccaccaacgccaccgagctcattgggaaaacttttaaggtgaacattgctgtgtcc
gacatgggcactcccagcctgagcaccaaggccactctggaggtgactttcatcaatctc
agggaccacctgaagaactcttcacctggcacccgcggacagctcagcttcaccatgatg
atggcgatctgcctgggtgccacctgcctgctgctcctgttggccatcgctttggtaaca
acgttctgccgcccagagaaacgggacagccgggcgtacaactgcagacaggctgagtcg
acgtacactcgccacccgaggcgcccacagaagaacatcaggaagtctgacatccagcta
attcctgtcatcagagggcgaaaggaggagcctcttgaggatgatagtgaagcccagcca
ctggctcctcctccaatggtgtcagacgatccacaaactgacaggcagtataccttaacg
ccatcagtcatgaacacaagcttccattcccaaggctaccctgaaggggatcaacctgcc
acccactacagcaagacgctacggaaacctgggaatatcgaacttgatggcactttgcct
ctgacgcctgccagctcatacaggagtcttcggaaagcaagaaacccttcgtcatcctct
tcagtctcacattcgagcaccttgaagcgtcaggctcacgctggaggggaggaggcggaa
cggttgagttcatcatcccaggcgactctcaggaggccgaggacctcggagggacgaggg
gggcccgatgcagaacatcggcagatgcttcgaaacctggttcgactgtccatggctgcg
tttggagactccattgagctctcctcagcttccccagaagtgcagcagatctcccagctc
ctctccctcctccggcagggtcagctgcagcccaggcccaacttcagagggaacaaatac
tcccatcgcaatggcaggtatggaggccaggactgctctgattggcagagcaccaaagac
agcggacatggagagagtgaggctggagatgtggactgggaaccaggaagagactcaccc
atagaccctcagctggaggagggactcaaccacctgctcaaccaccctgatgacgtcttc
tcggaggtgaatgacccggcctggatggcccgactctctctcccactcaccagcgattac
cacgacaacgtatttgtccccaacgggcctccgtccactgacagcgaactcctgccgagg
gacgccctggactcctcgtccttctccaccttcggtaaatctccagagaaggacggccca
ctgggcggggccctcctgtctgaggtcagcacgctctttgagatgctgatgacgcagaag
gcagactcacaccctggtcctcggcctgacgtcctgtaccgactatctgcagcataccgc
cgctcgctgggcctagatgccaacgcccccactgccgcaggcaacacacagaggaactct
gggaacactgagaagaggtcgggtctggctgcaccctcaggactttattaa
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