Epinephelus fuscoguttatus (brown-marbled grouper): 125894794
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Entry
125894794 CDS
T08419
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03020
RNA polymerase
efo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125894794 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
125894794 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efo03021
]
125894794 (polr2b)
03400 DNA repair and recombination proteins [BR:
efo03400
]
125894794 (polr2b)
Enzymes [BR:
efo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125894794 (polr2b)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
125894794 (polr2b)
DNA repair and recombination proteins [BR:
efo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
125894794 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
125894794
NCBI-ProteinID:
XP_049442373
LinkDB
All DBs
Position
LG9:complement(3817784..3829398)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDQDEDNQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDELDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgatcaggacgaagataaccagtatgacgaggacgatgatgaaatcactccagat
ttgtggcaggaagcatgctggatcgtcatcagctcttattttgacgagaagggtctggtg
cggcagcagctggattcatttgatgagttcatccagatgtcggttcagaggattgtggag
gacgctccgcccatcgacctgcaggctgaagcccagcacacctcaggagaggtggaggag
ccgcctcgttacctgctgaagttcgaacagatctacctgtccaagcccacccactgggag
agagacggagcgccatctcccatgatgcccaacgaagctcgactgcggaacctcacgtac
tcggcccctctgtacgttgacatcacaaagaccatcataaaggagggcgaggaccagctg
cagactcagcaccagaagaccttcattggtaaaattcccatcatgcttcgctccacctac
tgtctgctgagcggcctgacagacagagacttgtgtgagctcaacgagtgtccgcttgac
cccggaggttatttcatcatcaacggctccgagaaggtgctgatcgctcaggaaaagatg
gccaccaacacagtgtatgtgtttgccaagaaggactcaaagtacgcctacactggtgag
tgtcggtcctgtttggagaactcgtcccgtcccaccagcaccatctgggtcagcatgatg
gccagaggaggacagggtgtgaagaagagcgccattggtcagaggattgtgtccacgctg
ccatacatcagacaggaagttcctatcatcatcgtgttccgagcgctgggcttcgtgtca
gacagagacatcctggaacacatcatctacgacttcgacgacccagagatgatggagatg
gtgaagccgtctctggacgaagcgtttgtgatccaggagcagaacgtggcgttgaacttt
atcggctccagaggagcgaaacccggagtgacgaaggaacggagaattaaatacgcaaaa
gaagttctgcagaaagagatgctgccgcacgtcggagtcagcgacttctgtgagaccaag
aaagcttacttcttagggtacatggtccacaggttgctgctggctgctctcggcagacgt
gagctggacgacagagatcactacggcaacaagagactggacctggccgggcctctgttg
gctttcctcttcagaggcatgtttaagaacctgctgaaggagatcaggatttacgctcag
aagtttatcgacagaggaaaagacttcaatctggagctcgccattaaaacccgaatcatc
tcagacggcctcaagtactcactggccactggaaactggggcgacgtgaagaaggctcac
caggcccgagctggagtgtcacaggtgttgaaccgtctgacattcgcatccactctgtcc
catcttcgacgagtcaactctccaatcggcagagatggcaaactggcaaaaccccgacag
ctgcacaacacactgtgggggatggtgtgtccggccgagacgccagagggtcacgctgtg
ggtctggtgaagaacttggccctcatggcctacatctctgtgggctctcagccgtctccc
atcctggagtttttggaggagtggagtatggagaacctggaggagatctcgcctgccgcc
atagcagatgccactaagatctttgtcaacggctgctgggttggaatccacaaagatcct
gaacagctgatgaacacactgaggaaactccgcagacagatggacatcatcgtgtctgag
gtgtcaatgatcagagacatcagagaacgtgagatcagaatctacacagacgctggacga
atctgccgaccgctgctgatcgtcgagaaacagaagctgctgctgaagaggcgacacatt
gaccagctgaaggaaagagagtacaacaactacagctggcaggacttggtggcgagcggc
gtggtggaatacatcgacaccctggaggaagagacggtgatgcttgccatgacccctgat
gacctccaggagaagggtgtggcttactgctccacctacacacactgtgagatccacccg
tccatgatcctcggagtctgtgcttctatcatccccttccccgatcacaaccagtctccc
aggaacacgtatcagtctgctatgggtaaacaggccatgggtgtctacatcaccaacttc
catgtacgaatggacacgctggcccacgtgttgtactatcctcagaaaccgctggtcacc
acccgatccatggagtacctgcgcttcagagagctgcctgcaggaatcaactccatcgtg
gcgattgcctcgtacactggatacaaccaggaggactctgtaatcatgaacaggtcggcc
gtggaccgaggcttcttcaggtctgtgttctatcgatcctacaaagagcaggaatctaag
aaaggttttgatcaagaggagatcttcgagaagccgacacgtgaaacctgtcagggtatg
agacacgccatctacgacaagctggatgatgacgggctcatcgcacccggtgttcgtgtc
tccggtgaggacgtgatcatcggaaagactgtaacgctgccagaaaatgatgacgagctg
gacagcaccaaccgacgctacacaaagagagactgcagcaccttccttagaaccagtgag
actggcattgtggaccaggtgatggtgactctgaaccaggagggctacaagttctgcaag
atcagggttcgctcggtccggattcctcagatcggagacaagttcgccagccgacacgga
cagaaaggaacctgtggaatccagtacagacaggaggacatgccgttcacctgtgaagga
atcacacctgacatcatcatcaacccgcacgccatcccgtccagaatgacagttggccat
cttatcgagtgtctgcagggcaaggtctctgcaaacaaaggtgagatcggtgacgccacg
ccatttaacgacgccgtcaacgtgcagaaagtgtcaaacctgctgtctgaatatggctac
cacctgagaggaaatgaggttctgtataacgggttcacggggaggaagctgacatcacaa
atcttcatcggcccgacttattatcagcgtctgaagcatatggtggacgacaagatccac
tcaagggcccggggccccgtccagatcctcaacagacagccaatggaaggtcgatcacgt
gatggcggcctgcgtttcggagagatggagcgtgactgtcagatcgctcacggagcagct
cagttcctcagagaacgtctgttcgaggcatctgatccgtaccaagttcacgtgtgcaac
ctctgtggactgatggccattgccaacacacggacgcacacgtatgagtgtcgaggctgc
cgcaacaagacacagatctctctggtccggatgccgtacgcctgtaagcttctcttccag
gagttgatgtcgatgagtattgctcctcgtatgatgacatcatag
DBGET
integrated database retrieval system
