Epinephelus fuscoguttatus (brown-marbled grouper): 125894797
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Entry
125894797 CDS
T08419
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125894797
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
efo01009
]
125894797
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efo04515
]
125894797
Protein phosphatases and associated proteins [BR:
efo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125894797
Cell adhesion molecules [BR:
efo04515
]
Cadherins
Protocadherins
125894797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
PepSY
Fibulin_C
PDGLE
Motif
Other DBs
NCBI-GeneID:
125894797
NCBI-ProteinID:
XP_049442378
LinkDB
All DBs
Position
LG9:complement(2875881..2910081)
Genome browser
AA seq
1019 aa
AA seq
DB search
MAALRWEVLLFLVVVLLVSCSAASTDILYRVPEEQPPNTLIGSLAADQGLPDTGHLYKLE
VGSPYLRVDGKTGDIYTTEIPIDRETLRDCRNLFEGDKCFLEFEVSITDMVKGIGSGPRL
IEGRIEVMDINDNTPQFSSPILTLSIPENTHIGALFSIPMATDRDSGANGVAEYSLSTGP
DADQLFSLQVAVDSDEKLPQLVVMGNLDREKKDSYDLNIRVVDGGKPARASSALLRVTVT
DQNDNSPKFERSHYEADLPENSPQGHSVLQVRANDADTGSNGEIDYSLHQVTEAVQRLLR
IDRSTGIIYVKGLVDREEESFLKFFVVAKDRGPNSKSTKVLVNISVKDVNDNAPAIEIRG
IGLVTHQDGVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESAND
RKRKYFLQTTTLLDYERVKDYRIEIVAVDSGNPALSSTNSLRVQVTDMNDNTPVFSPAML
EVDFPEGNQPGDRVLDITATDADSGTNAELVYSIIELSATRLFEIDADTGEIRVKNLLDR
EETERYEFRVAAADKGVPSKTGTATLVINVLDRNDNDPKFMLSSYSFSVIENMPPLNPVG
VVTVTDADKGENARVKLYVEQDNSKFVIQNGTGTILSSISFDREKESTYTFRLKAVDAGD
PPRSSYVGVTINVLDENDNAPYVTKPANSSYTYMSPVTPPDTSVEVVEAEDIDSGPNAEL
VYTITGGNPYGLFHISPNSGEITLVQEFTGKHNGLHRLVVRVSDKGKPPRHTTALVHVFV
NDTKSNVSLIEALVGHSLYTPLDRDIAGDPNYALAQRSNILYGSLAGVAGVILVIVAVVV
IRHRLQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKSKKGKAPKPAKPLEEDEEASLQK
GLKFNLINDNVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQAVQ
DLPATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSSKQVGDYANTAMYHRDIHWTNGVW
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgaggtgggaggttctgctgttcctggtggtcgtcctgctggtctcctgc
agtgccgcatccaccgacatcctgtatcgggttcctgaggagcagccgcccaacacactg
attggcagcctggcggcggaccagggcctgcccgacaccggccacctctacaagctggag
gtgggctcgccgtacctgcgggtggatggcaagaccggcgacatctacaccaccgagatc
cccattgaccgcgagacgctgagggactgccgcaacctgttcgagggcgacaaatgcttc
ctggagttcgaggtgtcgatcaccgacatggtgaaagggatcggctcggggccgcggctg
atagagggccgcatcgaggtgatggacatcaacgacaacacgccacagttctcctcgccc
atcctcaccctgtccatccctgagaacacgcacatcggcgccctcttctccatccccatg
gccaccgacagggactctggcgccaacggtgtggcagagtactcactgagcactgggcct
gacgctgaccagctcttcagcctgcaggtcgcagtggactccgacgagaagctgcctcag
ctggtcgtcatgggcaacctggatcgtgagaagaaggactcgtatgacctgaacatccgg
gtggtggacggagggaagccggcaagagcgagcagtgcactgctgcgggtcaccgtcacc
gaccagaacgacaactcgccaaagtttgagcggagtcactacgaggccgacctgccggag
aacagcccgcagggacactctgtgctgcaggtcagagccaacgacgcggacaccggctcc
aatggggagatcgactacagcctccatcaggtgacagaggccgtccagaggcttctgcgc
atcgaccgctctactggcatcatctacgttaagggcctggtggaccgcgaggaggagagc
tttctcaagttctttgtggtcgccaaagatcgtgggcccaactccaagagcaccaaggtc
ctggtgaacatcagcgtcaaggatgtgaacgacaacgcacccgccatcgagatccgtggt
atcggcttggtgacacaccaggatggcgtggccaacatttctgaggacatgcccatcggc
acgccagtggcattggtccaggtgtcggaccgtgatgagggggaaaacgcggtggtgact
tgtgtggttgccggcgacgtcccgtttcagctccgacctgcgagtgagtcggccaacgac
cggaagaggaagtacttcctgcagacaacaaccctgctggattatgagcgtgtgaaggat
tacaggattgaaatcgtcgcagtggattctgggaacccggccctgtccagcaccaactcc
ctcagagtgcaggtcacggacatgaacgacaacacgccagtcttttcacctgccatgctc
gaggtggactttccagagggcaatcagccgggtgacagggtgttggacatcactgcgaca
gacgctgacagcggcaccaacgcagagctggtctacagcatcatcgagctgtcggccacc
aggctatttgaaattgatgccgacactggagaaattcgagtgaagaacctgctggatcgg
gaagagacggagcgttacgagttccgcgtggcggcggcagataagggtgttcccagcaaa
actggcaccgctacattggtgattaatgttctggaccgcaatgacaacgatcccaagttt
atgctgagcagctacagcttctccgtcatcgagaacatgcctccactcaatcccgttggc
gtggtgactgtcactgatgccgataagggtgagaacgcccgcgtgaagctgtatgtggaa
caggacaacagcaagtttgtcatccagaacggcaccggcaccatcctgtccagcatctcc
ttcgaccgtgagaaggagagcacctacaccttccgcctgaaggccgtggacgctggtgac
cctcctcgatcgtcctacgtgggtgtgaccatcaacgtcctggacgagaacgataacgcc
ccctacgtcaccaaaccagcgaactcctcctacacgtacatgtcccccgtcaccccgcca
gacaccagcgttgaggtggtggaggctgaggacattgactctggacccaacgctgagctg
gtctacaccatcacaggtggcaacccgtacggcctgttccacatctcgccaaacagcggg
gagatcacgctggtgcaggagttcaccggcaagcacaacgggctgcaccgcctggtggtg
agggtcagcgataaaggcaaacctccccgccacaccaccgccctggtccacgtctttgtc
aacgacaccaagtccaacgtctccctcatcgaggcactggtcgggcacagcctctacacc
ccgctggacagggacattgccggagatcccaactacgccctcgcacagcgcagcaacatc
ctgtacggcagcctggcgggggtcgcaggcgtgattcttgtcatcgtagccgtggtggtc
atcagacaccgactgcagaaggacacaaagagcggttaccaggccggcaagaaggagagc
aaggacctgtacgcgcccaagcagggccccaaaaacggcaaaggcaaaaagagcaagaaa
ggaaaagctcccaaaccggcgaagccgctggaagaggacgaggaggcgagcctgcagaaa
ggcctcaagttcaacctcatcaacgacaacgtcaacgacagtcccagaatccacctgccc
ctcaactacccgccaggaagccccgacctgggccgccactaccgctccaactccccgctg
ccctccatccagctgcagccgcagtcgccctccgcctccaagaagcaccaggccgttcag
gacctccccgccaccaacaccttcgtgggaacgggcgacaacaactccacgggctccgac
caatattcggattacagctacaaggccaacccgcccaaatacagcagcaaacaggtagga
gactacgcaaacacggccatgtaccacagggacatccattggaccaacggggtgtggtag
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