KEGG   Epinephelus fuscoguttatus (brown-marbled grouper): 125894809
Entry
125894809         CDS       T08419                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
efo  Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:efo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:efo03041]
    125894809 (smu1a)
Spliceosome [BR:efo03041]
 Complex B
  Other components
   Complex B specific factors
    125894809 (smu1a)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st LisH_TPL NBCH_WD40 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_TEP1_C WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_BBS7 Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_WDR75_2nd Beta-prop_IP5PC_F LisH_PAC1 LisH WD_LRWD1 TFIIIC_delta VPS8_N PROPPIN zf_topless DUF7165 PA14 LisH_WDR26
Other DBs
NCBI-GeneID: 125894809
NCBI-ProteinID: XP_049442399
LinkDB
Position
LG9:complement(6014397..6128664)
AA seq 513 aa
MSLEVESADVIRLIMQYLKENNLQRTLATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLSRHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMGFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCISFCKDSSQLLSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTPD
GHHVISASSDGTVKMWNMKTTECTNTFKPLGTSAGTDITVNNVIQLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctctggaggtggaatcagcagacgtgatccgtctgattatgcagtacttaaaggaa
aataacctgcagcggacattagccaccctgcaggaggagaccaccgtgtccctgaacact
gtggacagtatagagagctttgtggcggacataaacagcggccactgggacactgtcctg
caagccatccagtccctcaagctgccagacaagaccctgatagacctttatgaacaggtg
gtgttagagctgatcgagttgagagagttgggtgcagcccgttccctcctcaggcagaca
gaccccatgatcatgctgaaacagacccagccagagagatacatccacctggagaacctg
ttggctcgctcgtacttcgatcccagagaagcatatccagacggcagcagcaaggagaag
cgccgggcagccatcgcccaggctctggctggagaggtcagcgtggtgccgccctctcgt
ctcatggctctgctgggacagtctctgaagtggcagcagcatcagggcctcctgcctcct
ggtatgactatcgatttgttcaggggtaaagcagccgttaaagatgtggaggaggagcgc
ttccccacccagctcagcagacacatcaagtttggacagaagtctcatgtggagtgttcc
cgattctcccctgatggtcagtacctggtcactggctctgtggacggcttcatcgaggtg
tggaacttcaccactggcaaaatcagaaaggatctgaagtaccaggctcaggataacttc
atgatgatggacgatgcagtgttgtgtatgggcttcagtagagacacagagatgttggcc
accggagctcaggatggaaagatcaaggtgtggaagatccagagcggccagtgtctgagg
aggtttgagcgcgcccacagtaaaggagtaacatgcatcagtttctgtaaagacagcagc
cagctcctcagtgcctccttcgaccagacaatcagaatccacgggctgaagtctggcaaa
actctaaaggagttccgcggtcactcgtcatttgtgaacgaggccaccttcactccagac
ggtcaccacgtcatcagcgcttcttcagacggtacagtcaagatgtggaacatgaagacc
accgagtgcaccaacaccttcaagcctctgggcacgtcggccggcactgacatcacagtc
aacaacgtcatccagctgcccaagaacccggagcactttgtcgtgtgtaaccgctccaac
acggtggtcatcatgaacatgcagggacagatcgtgaggagtttcagctctggtaagagg
gaaggtggtgactttgtgtgctgcactctgtcgccccgcggcgagtggatctactgcgtg
ggtgaagactttgtgctctactgcttcagcaccgtcaccggcaagctggagagaactctg
acggtccatgagaaggatgtgatcggcatcgcccaccacccccaccagaacctcatcgcc
acctacagtgaggacggtctgctgaagctatggaagccttga

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