KEGG   Epinephelus fuscoguttatus (brown-marbled grouper): 125894893
Entry
125894893         CDS       T08419                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06485  integrin alpha 6
Organism
efo  Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04382  Cornified envelope formation
efo04510  Focal adhesion
efo04512  ECM-receptor interaction
efo04514  Cell adhesion molecule (CAM) interaction
efo04518  Integrin signaling
efo04810  Regulation of actin cytoskeleton
efo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:efo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    125894893
   04514 Cell adhesion molecule (CAM) interaction
    125894893
   04518 Integrin signaling
    125894893
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125894893
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    125894893
   04810 Regulation of actin cytoskeleton
    125894893
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    125894893
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:efo04147]
    125894893
   04515 Cell adhesion molecules [BR:efo04515]
    125894893
   04090 CD molecules [BR:efo04090]
    125894893
Exosome [BR:efo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125894893
  Exosomal proteins of breast milk
   125894893
Cell adhesion molecules [BR:efo04515]
 Integrins
  Integrin alpha subunits
   125894893
CD molecules [BR:efo04090]
 Proteins
  125894893
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 FxsA
Other DBs
NCBI-GeneID: 125894893
NCBI-ProteinID: XP_049442520
LinkDB
Position
LG9:13941350..13972411
AA seq 1063 aa
MAKHWHMVYLLCFCRLLTFDVGAFNLDTQNVMQRNGDPGSLFGFSVAFHQQLNPAKKNLL
LVGAPRAKHQNQANVTGVVYQCDLTTTSDRCQPIEFDDDAFLDSKGINNQWMGVRVTSQG
PGKNVMACAHRYQQWSPSPSLYVPRLVTGQCYLLGEDLQVGKVERTWRRVVCGLKHLTKR
QMDHAWFAYCQQGHGASFAKDNTSLLFGAPGAYLWKGIVRMEVVDNLDIFSPDPRETGDY
DQFDPNLIPLQRDSYLGFSIDSGMALIGQGELTIVSGAPRGGYSGQVAFLKADPVLKTSL
AVKLVLSGQGLASSFGYDVAVVDLNGDGWEDLVVGAPQFFVKDGLVGGAVYIYINDKGKN
WEKIVPTQLLGHKDSMFGLAVASIGDINQDGFGDIAVGAPYDGSGRVYLYYGTSDGIHQK
PVQVLSPGSKEATLFGYSLSGNLDVDNNQYPDLAVGSLSDSVFVYRARPVVTVSTYLTVT
PNQIDITKEQCDERTCYFTARACFIYTAHPASLNPKLTLNYTVEADAEKRKMRLPPRMDF
LGSFPRKLELPGQKREVCTDIRIRLLRDIKDRLHSIPVSVTVSLLSSSQTTRTSADLPNV
TPVFNLFQPKTTVSEIILINKGCGRDNICQSNLELQYKFCSRKKQDNHDVFKPLASEDGV
AVITPSEDDIALEITVTNRNGDDAHQSHSVISLPNALPYASIVYSTASETQVSCTANEKG
TLIDCELGNPLKRDAEVTFYVLLATSRITLSTKDVNVTMQLTTTSVQTIQPVEALAKVVF
ELEMRVYGLARPSQMSLGETLKGESSINSVDEIGTLVQFEFRITNLGRSLKSFANVSLNI
HWPKENSVGKWVLYLTQISSKGVQSVPCSPVDEVNPLKHVKGWHDPSRKRREAEGEAEAE
VEALSTDGFPFLPKRRKYKTLTCSDGLKCVEIRCPLLGLDSSAVMVLHSRLWNATFTEDY
SSLNYLDIVVDATLTLTNSPENIGLQPENPGTKVKVTVFLERKVKYFTKVAWWIIFLTVI
ALLLLLAILGFLLRKRGCINCLAQNKKLPHDGDPDTETAPLKG
NT seq 3192 nt   +upstreamnt  +downstreamnt
atggcaaagcattggcacatggtgtatctgttgtgtttctgccgcctcctgacttttgat
gttggagctttcaatctggacacgcagaatgtgatgcagagaaatggagatccaggaagc
ctgtttggattttctgttgctttccaccagcagctgaatcctgccaaaaagaacctattg
ctggttggagctccgcgagcaaaacaccagaaccaagcgaatgtaactggtgttgtttac
cagtgtgatctcactacaacatctgatcgctgccagcccattgagtttgatgatgacgcg
ttcctggatagtaaaggcataaacaaccagtggatgggagttagagtgacgagccaaggt
cctggaaaaaatgtcatggcttgtgctcatcgataccagcaatggagcccaagtccgagc
ctttatgtccctcgcttggtgacgggtcagtgttacctcttaggggaagacctgcaggtc
gggaaggtagagaggacgtggaggagggtagtttgtggccttaagcacctgaccaaacgt
caaatggaccacgcatggtttgcatactgccaacagggtcatggggcttcttttgcaaag
gacaacacatctctgttatttggagcaccgggagcgtacctgtggaaaggaattgtacga
atggaggtcgtggacaacctggacatcttcagtccggatcctcgtgagactggggattat
gaccaatttgacccaaacctcattcccctacagagagacagctacctgggattctccatt
gactctggtatggccctcatcggacagggtgagttgaccatcgtctcaggagcacccaga
ggaggttacagcggccaggtggcatttcttaaggccgaccccgtgttgaagacaagtttg
gctgtgaagttggtcctctctggtcagggcctggcctcctcctttggttatgatgtggca
gtggtggatctcaatggtgatgggtgggaggacctcgttgtaggagcaccacagttcttt
gttaaagatggattggttggaggagctgtctacatctatatcaacgacaaaggaaaaaac
tgggagaagattgttccaactcaacttcttggacataaagactcaatgttcggcctcgca
gtggcaagcataggagacatcaatcaagatggttttggagatattgctgtgggggcacca
tatgatggctctggtcgagtttacctttactacggcacatcagatggaatccaccaaaag
ccagtgcaggtactctcaccagggtccaaagaggctactctgtttggatattctctgtct
ggaaacttggacgtggataacaatcagtatcctgatctggctgtgggatctctgtctgat
tctgtctttgtctacagagcgaggccagtggtcactgtcagcacctatctgacggtaaca
ccaaatcagatagacatcacaaaggaacaatgtgatgaacgcacatgttattttacagct
cgggcatgttttatctacacggcacacccagcatcgctcaaccccaaactgacactcaac
tacactgttgaggccgatgctgaaaagagaaagatgagacttcctcccagaatggacttt
ctgggttcttttccaagaaaattggagctgcctggacagaagagagaagtctgtactgac
atccgaatccgacttctgcgtgatattaaggacaggctgcacagtatccccgtctccgtc
actgtgtctcttttgagctccagtcagacaaccaggacgagtgcagatcttcccaacgtt
actcctgtcttcaacctcttccagccaaagaccacagtctcagagattatattaataaac
aaaggctgcggaagggacaacatttgccaaagtaacctcgagctacagtacaaattctgc
tccagaaaaaaacaagacaatcatgatgttttcaaaccactggccagcgaggatggtgtt
gcagtcatcactccgtctgaagatgatatagctttggagatcactgtgactaacagaaac
ggggatgacgcacaccagagtcactcggtcatcagcctccccaatgctcttccttacgcc
tccattgtctacagcacagcatcagaaacacaagtgagttgtacagccaatgaaaaagga
acactaatagactgtgaactgggaaatcctctcaagagagatgcagaggttactttttat
gtcctcctcgcaacatccaggatcacactgagcacaaaagacgtcaacgtcacaatgcaa
cttacaacgacgagtgtgcagacgatacagccagtggaggcgttggcaaaagtggttttt
gagctggagatgcgagtatatggactagccaggccttctcaaatgtcactgggtgaaacc
ttgaagggtgagagcagcataaattcagtggatgaaatcggaactctggttcaatttgaa
tttaggataacaaatttgggcagatcacttaaatcttttgccaacgtgtcactgaacatc
cactggccgaaggagaactctgtaggaaaatgggttctgtacttgactcagatcagcagt
aaaggtgtacagtcggtcccctgctcacctgtggatgaagtcaatccactgaaacatgta
aagggttggcatgacccctcgaggaaaagacgtgaagctgaaggtgaagctgaagctgaa
gttgaagctctctcaactgacggattcccatttcttccaaaaagaagaaaatacaaaacc
ttgacctgctctgatggactgaagtgtgtggagatacgctgccctctgctggggttggac
agctctgcagtgatggttctgcactcacgcctgtggaacgccacttttacagaggattac
agctctttgaactacctggacattgtcgtggatgctactctcactttaacaaactctcca
gagaatattggacttcaaccagagaatcctgggacaaaggtaaaggtgacagtgttcctc
gagagaaaggtcaaatatttcactaaagttgcctggtggataatcttcctgacggtcatc
gcgttgctcctgttgttggcaattcttggcttcttgttgcggaagcgtggatgcattaac
tgcctcgctcagaacaagaagctcccacatgatggagatccagacacagagaccgctccc
cttaagggctga

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