Epinephelus fuscoguttatus (brown-marbled grouper): 125894912
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Entry
125894912 CDS
T08419
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-A
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efo04121
]
125894912 (rlim)
Enzymes [BR:
efo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125894912 (rlim)
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125894912 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
125894912
NCBI-ProteinID:
XP_049442553
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Position
LG9:27707180..27715119
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AA seq
671 aa
AA seq
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MEGSDSSEQSGSDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFSRLQQIKDGPEQQNNSTSAPSTENGEDPVEPPENPEDPANGDSLLDWLNTVRRTG
NTTRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQEPPQESSQESP
EGQEVVANAEPQVPMETEVVEEPVVEELAVIVEPEPEPEPEPVLEPEPEPVPEPEPEPEL
EEVVSQEILGERPSSPAALPVQPPLSPPRRGQRRARSRSPEPRRTRARTARSRSPLNLDQ
LDGLPNSRHAHSSQSISSATSVSPVPQVEGSSRTRQHVLSRQSTADSDVQPSRAGEEMVP
EAQNVGSQEGEATGGEGGAAGRRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNN
TFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTG
FGELGYLMDSDSDSSDSNRGANTPADLAEALNNPDAPPAAAPIADVDEPPVAAGVRARTA
ETDIDEGLAAAPPASGGRARPRPPISLEEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQI
DNLSMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRA
VLVSANRESVV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtctgacagttctgagcagagtggcagtgaccagccagagtcacagcgcaga
aggcagctggaccgcctggacagggaggaggccttttaccagtttgtcaacaatctgagt
gatgaggactatcgtctcatgagagacaacaatcttttgggcaccccaggagaagtaacg
gaggatgagctgtttagcagacttcagcaaatcaaggatggtccagaacagcagaataac
agtactagtgcccccagtactgaaaatggagaagatccagtcgaaccaccagaaaaccct
gaggatcctgccaatggggatagtctcttagactggctgaacacagtgaggcgcacaggc
aacactaccagaactggtcatcgtggtaaccagtcatggcgggccgtaagccagaccaac
ccaaacagtggggattttcgcttcagcctcgaaatcagtgtgaatcgaaacctggctgaa
cagcaggcagctgctgaaggggagcaggagcctccacaggagtcttcccaggaatctcca
gagggtcaagaagtggtggcaaatgctgaaccacaggtgcctatggagacagaagtggtg
gaggaaccagtagtagaggaattggctgtcatagtggagccagagcctgaaccagagcct
gagccagtgcttgagcctgagccagagcctgtgcctgagccagagcctgagcctgaacta
gaagaagttgtttcacaagagattttaggagaacgtcccagctcacctgctgccctgcct
gtacaacccccactttctcctccacgtagaggacagaggagagcccgcagccgtagtcca
gagccacgcaggactagggcccgtacagccaggagccgttcccctctcaatctggatcag
ctggatggtctccctaattcacgtcatgctcactcctctcaaagcatcagctctgccacc
agtgtctcccctgtgcctcaggtggagggcagctctcggactcgacaacatgttctttct
aggcaaagcactgctgacagtgatgttcagccatctagggctggcgaagaaatggtccct
gaggcccaaaatgtaggatctcaggaaggagaagctactgggggtgaagggggtgcagca
gggcgccgtccccctactattatgcttgatctccaggtgcgtcgtgtgcgtccaggcgaa
tatcggcaaagagacagcattgctagtcgcacccgttcacgctcccagaactcaaacaac
acatttctttatgaaagtgagcgtggtggatttcgtaggactttctcacgctctgagcgt
gctggtgtgaggacctacgtcagcactattcgcatacctatccgaagaatctccgatgca
ggtttgggagaggcaacctcaatggctctccagtctatgattaggcagattatgactggt
ttcggtgaactcggctacctcatggattcagattctgattcttcagattcaaaccgcgga
gccaacacacctgcggatctggctgaagctctcaacaacccagatgctccacctgctgct
gctcctatagctgatgttgatgaaccacctgtggctgctggagtcagagcaaggacagct
gagactgatattgatgagggccttgccgctgctccacctgcctctggtggcagggcccga
cctagaccacctatcagcctagaggagcccagctcactgcccttcctgcggcttgcccat
ttcttcctcctaaatgatgacgacgaggaccagccccaagggttgaccaaagagcagatt
gacaacctctcaatgcgcaactttggtgagagtgatgccttgaagacttgcagtgtctgc
ataacagaatatgcagaaggtaacaagctacgtaagctgccctgctcgcatgagtaccac
gtgcactgcattgatcgctggctatcggaaaactccacttgccccatctgccgcagggct
gtcttggtatcagccaaccgagagagtgtggtgtag
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