Epinephelus fuscoguttatus (brown-marbled grouper): 125895601
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Entry
125895601 CDS
T08419
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03010
Ribosome
efo04120
Ubiquitin mediated proteolysis
efo04137
Mitophagy - animal
efo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
125895601
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125895601
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125895601
04137 Mitophagy - animal
125895601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
efo03011
]
125895601
04121 Ubiquitin system [BR:
efo04121
]
125895601
Ribosome [BR:
efo03011
]
Ribosomal proteins
Eukaryotes
Large subunit
125895601
Archaea
125895601
Ubiquitin system [BR:
efo04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
125895601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
zf-C4pol
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
125895601
NCBI-ProteinID:
XP_049443527
LinkDB
All DBs
Position
LG10:18856790..18859017
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AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagacgttgacggggaagaccatcaccctcgaggtcgagcccagc
gacaccatcgaaaatgtcaaggcaaagatccaggacaaggaaggaattcctcctgatcag
cagcgtctgattttcgctggcaaacagttggaagatggacgcacactgtctgactacaac
atccagaaagaatccactctgcatctggtcctgcgtctgcgtggtggcatcattgagccc
tctctcagacagctggcccagaaatacaactgcgacaagatgatctgccgcaagtgctat
gcccgtctgcacccccgtgctgtcaactgccgcaagaagaagtgtggacataccaacaac
cttcgccccaagaagaagctgaagtag
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