Epinephelus fuscoguttatus (brown-marbled grouper): 125896158
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Entry
125896158 CDS
T08419
Symbol
ushbp1
Name
(RefSeq) colorectal mutant cancer protein
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
efo03037
]
125896158 (ushbp1)
Cilium and associated proteins [BR:
efo03037
]
Primary cilia and associated proteins
USH complex and associated proteins
125896158 (ushbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
DUF7653
Polo_box_2
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
125896158
NCBI-ProteinID:
XP_049444481
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All DBs
Position
LG10:complement(17955544..17969864)
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AA seq
704 aa
AA seq
DB search
MEDSCLVRCDSLDAGSGCDREVLTPIDRMTLDPEGSDPSADLEPSPAELAQCEAEVGTLL
SIIAELNKKMGSLKAPSESGELRSPGPSRPLVPDLLSHRLVRSSPERNSASAVTSKPPLA
DRGGGGVVWTKLQEVLSSVEDSISSKRSWAAPITASDQDKHREHLRAAQESSVKATKILE
EMEIEFGISCPPGPPKDQYQENILDPEKRDSALRGSLQSHQEELERAESTISQMEEEKNK
LVGLHKAWRSGSCSPSYRPPAGALSPDWASPPFPGSPLLYRRAARAMTPVSVGGDGSPVG
SINSCSPCPSPISLESETERLNRCIERLRARNERLTAALERRKGESEKISITLNRLEADC
SALQMALRYCEECEEAYSELLSLYDAKKQQSIPLKTDSAEAVGDRQQPDRPSAQLMKMGT
EELSTSFSTAGVTEETETQSHTGQRTPEPVEREAVLRQQIERLKRDRAAIRLPKPSPGVE
GKISPESCLPAGSRGGHVTKENAKPPDTKKEKASLFYELISVREEMSDLRALIRLKEKEL
RCLEWGLMAQKAQEAAGAFVPESLREETEDHRTEQQRLCENAAKVGSDGDITDPRSRPIL
KELQAVLQREQALKKRLALVQDSLNTALSDSTSHRRDNGDQIARLTQAHSKALSSYRQIR
RKYREQVWRLEQKVAAMTESHHHQSGAPKAAGETLEWRREETVL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcttgcctggtccgatgtgacagcctggatgctgggtcagggtgtgacagg
gaggttttgaccccgatcgaccgtatgacccttgaccctgagggctctgacccctcagca
gacctcgagccttcaccagcagaactggctcaatgtgaggccgaagtgggcacgctgctc
agcatcattgctgaactgaacaagaagatggggtcattaaaggcaccaagtgaatcagga
gaactgagatcaccaggaccatccaggcctctggttccagacctcctgtcccacaggctg
gtcaggagcagcccagagaggaactctgcctctgctgtcacatctaaacctccactggct
gacagagggggtggtggtgtagtatggactaaactccaggaggttttatcatcagtggag
gactccattagctctaaaaggtcctgggccgcccccatcacagcttctgaccaggacaag
cacagagagcacctcagagcagcccaggagagctcagttaaagccactaagatactggag
gagatggaaatagagtttgggatttcatgcccaccaggcccgccaaaggaccagtatcaa
gagaacatcctagatccagagaagcgagactcagctctcagaggcagcttgcagagtcac
caggaggagctggaaagagcagaaagcaccatcagtcagatggaggaggaaaagaacaag
ttggtcggtctccataaggcctggaggtcaggcagttgctctccttcctaccggccccct
gctggggctctcagtccagactgggcctctcctcccttcccaggttcaccattactctat
agaagagcagccagagcgatgacacctgtgtctgtgggtggggatgggtctccagtgggc
tccattaactcatgcagtccctgtcctagccccatcagcctggagtctgagacagaacga
ctgaacaggtgcatcgagaggctgagggccagaaatgaacggctgactgcagctctggag
cgcaggaagggagagtcagagaagatcagtattacactgaacagacttgaagctgactgc
tctgccctgcagatggctctcagatactgtgaggagtgtgaggaggcctacagcgagctg
ctgtcactttatgacgccaagaagcagcaaagcattcctctgaagacagactcagcagag
gcagtcggtgacaggcagcagcccgacaggccatcagctcagctcatgaaaatgggaact
gaagagctgtccacctccttctcaacagcaggggtcacagaggagacggaaacacagagt
cacacagggcagaggacacctgagccggtggagcgagaggctgttctccgacagcaaatt
gagcgcctgaagagggaccgggcagccattcgtctgcctaagccaagcccaggagtagag
ggtaaaataagccccgaaagttgtctcccagctggatcaagagggggacatgtgacaaaa
gagaacgctaaacctcctgacaccaagaaagaaaaggcttccctcttctatgaactcatc
tctgtcagggaggagatgtcagatctgcgagctctaatccgactcaaggagaaagagctg
aggtgtttggagtggggtttaatggcccagaaggcccaggaagcagctggagcgtttgtt
ccagagagcctcagagaggagaccgaggaccataggacggaacaacagaggctctgtgaa
aatgcagctaaagtgggtagtgatggggacatcactgatcctcgatccagacccattctg
aaagagctgcaggccgtcctgcaaagggaacaagccctgaagaagaggctggctttagtc
caagactcgctaaacacagctctgtcagacagcacctcccacaggagggacaatggagac
cagattgctcggctcacacaagctcacagtaaagccttgagttcgtaccgccagattcgt
aggaagtaccgggagcaggtgtggaggctggagcagaaagtggcagccatgacggagagt
caccaccaccagagtggagctccgaaagctgcaggggagaccttggagtggaggagggaa
gagactgttctgtga
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