Epinephelus fuscoguttatus (brown-marbled grouper): 125896360
Help
Entry
125896360 CDS
T08419
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125896360 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125896360 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
efo04131
]
125896360 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
efo03029
]
125896360 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
efo04812
]
125896360 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125896360 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
125896360 (si:dkey-110c1.10)
Membrane trafficking [BR:
efo04131
]
Others
Actin-binding proteins
Myosins
125896360 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
efo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
125896360 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
efo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
125896360 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
Myosin_N
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
125896360
NCBI-ProteinID:
XP_049444820
LinkDB
All DBs
Position
LG10:32092802..32108777
Genome browser
AA seq
1665 aa
AA seq
DB search
MMSLELYSKGASVWIPDPDAVWVSALLLQDYSPGDKHVLLQLSNGKEAHYPVASPTDLPP
LGNPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVAINPYDQLPIYGE
EVIDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGSGKTVSAKFTMRYFA
VVGGAAQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMRT
YLLEKSRVVFQASAERNYHIFYQLCASRELPEMRTLKLDAPEHFHYTSQGGEMQIPGTDD
LSDFERTRSAFTVLGVQPDQQMELFRILSAVLHLGNVNIQASGRNSDRSYIDADDHPLAV
FSKLLGVEGPQMAHWLCHRRLAVGGEMLVKPVSGQQAVEARDALAKHIYGQLFTWTVQRL
NSALRTQRGHTKSFIGVLDIYGFETFDRNSFEQFCINYANEKLQQQFNRHVFHLEQEEYI
REELAWSRIEFSDNQQCINLIEGQLGLFDLLDEECRMPKGSDVSWVQKLYDQHLTGKPHP
HFQKPRMSNSAFVVLHFADTVQYECDGFLNKNRDTVFEELINILKASQSELVAELFQQQG
NVPSVANGSVRSGKRTIKEHKLTVGFQFRQSLQMLMDTLNSTTPHYVRCIKPNDLKEPFM
FDPKRTVQQLRACGVLETIRISAAGFPSRWTYEEFFCRYRLLLPGPQSQDQAQALCRRAL
PELIQDPDQYCFGKTKVFFRAGQVALLERLRAERLRVAAVIIQSRVRGWLVRIRYTRICW
AAVTIQRYCRGALARRLALTLRYTKAALVIQKTYRMVVVRQLFLMIRQATITIQAFTRGT
LARRRYRLLLAERAAVLLQARVRGWLARQAYRRVRVAVVFMQCCVRRRAARRELMKLKTE
ARSVERYRELNKGMEVKLMQLQLKADQEARESAALRETLHAEREASSAELEALRATIQKL
ESQIQEKPQPGPVISEKEMEERRRAEEKAAQEILQLTQELQALKREKDDFCKEREDLSAR
LLEQEKAQEKCVDQAASQASAALRAELDEERRKYQGLLREFTRLEQRYDNLREMSLLTER
TKGHRRTDSTQSLSLEPLSPLSPSPTPLSPQSLTPLSLSPFPSAFPSPEEVRRVSVTSHC
LERRVSVWSCDTPMDQLMERMDVAKDPTVKMKGEDLAHAYDAVRVANKFLESQLRSQRSQ
REEELEALRCQLSQAVSSCSSAAQQQELQELLEAREQECVRLRRELKELKNTVSLRRLLT
QVLPSALTPETPSSPSRPKPTVTGLLECRKRDETKLMKNLITDIRVDSALSLPPGLAASV
LFLCVRQADCNGDQTHTRSLCSAAVTAMKAALKKHSNDVDMTALWLKNACLLHDLLTQHS
PKQALDSDQLVPLNADLSDLIRALSDLCIQAYQQLLSITEKRLQNIIVPSLLESETIPGL
SGSAVKLGTSRKRAGSDPRTVGGDAPTMAAVLRELGALHTALSRQDLPLTQMEQAFHQIT
YLISASALNSLLLRKDMCCWSRGVQIRYNVSLLEEWLRSRGLQAGGAVATLEPLIQAAQL
LQTGKKTEAEAQALVQTCTALSSQQIVKILTLYTPNSDLDERVTLNFIRTVQGLLKGRSD
GHPPQLLMDVRRVFPVTFPYMPPPVLHAEQLVIPDSLKISFLRRV
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctctggagctatacagcaagggggcgagtgtgtggatccctgacccagatgca
gtttgggtgtcagccttgctcctccaggactacagtcctggggacaaacatgtactgctg
cagctctctaatggaaaggaggcacattacccagtggcgtcccccactgatctcccaccg
ctggggaaccccgacatcctggagggggaaaatgatctgacagctctcagcttcctccat
gaacctgccgttttgcacaacctgcgggttcgattcctggactacagcagcatctacacc
tactgtggtattgtgttggtggccatcaatccctatgaccagctccccatatatggagag
gaggtgatagacgcttacagtggtcaggacatggccgacatggaacctcacatcttttct
gtggctgaggaagcctaccgcactatgaccagggaggagaagaaccagtctatcatcatc
agtggagagtctggctcggggaaaacagtctcggccaaattcaccatgcgatactttgct
gtggtcggaggagcagctcagcagaccagtgtggaagagagagttctggcctccaaccca
ataatggagtccattgggaatgctaaaaccacacgtaatgacaacagcagtcgttttggg
aagtacatcgagattggctttggcagaaaaggggacatcatcggggcaaacatgaggaca
tacttgctggagaagtcaagggttgtcttccaagcatcagcagagaggaactaccacatc
ttctaccagctgtgtgcctccagagaattacctgaaatgagaacccttaaactggatgca
cctgagcatttccactacaccagccagggaggagagatgcagattcctggaactgatgat
ttgtcggattttgaacgcactcgcagtgctttcaccgttctgggtgtgcagcctgaccag
cagatggagctcttcaggatcctgtcagctgttctgcacctgggaaatgtcaacatccag
gccagtgggagaaattctgaccggagttatattgatgcagacgaccaccctctggctgtc
ttctccaagctgttaggagtggaaggacctcagatggcccactggctgtgccatcgcaga
ctggctgtagggggagagatgctggtcaaacccgtgtccggccagcaggctgtagaggcc
agagatgctttggccaaacatatctacggccagctgttcacatggactgtccagaggctc
aactctgctctgcgcacacagaggggacacactaaatcctttataggggtacttgacatc
tatgggtttgagacctttgaccggaacagttttgagcagttctgtataaactatgcgaat
gaaaaactgcaacagcaattcaacaggcatgtgttccacttggagcaggaggagtacatc
cgagaagagctggcctggagcaggatcgagttcagtgacaatcagcagtgcatcaatctc
atagagggacaactgggcctgtttgatcttttagacgaggagtgcaggatgcctaaaggt
tcagatgtgagctgggtacagaagctgtacgaccaacacctgaccggcaaaccccaccct
cacttccagaaacctcgcatgtccaacagcgccttcgttgttctgcactttgctgacacg
gtgcagtatgaatgcgatggcttcttaaacaagaatcgagacacagtctttgaggagctc
attaacatcctcaaagcaagtcagtctgagctggtggccgagttgttccagcagcaggga
aatgttccctctgtggctaatggaagtgttcgctcaggaaagagaaccatcaaagaacat
aaactgacagtgggcttccagtttcgtcagtccttacagatgctgatggacactctaaac
agcaccactcctcactatgtccgctgcattaaacccaacgacctcaaagaacctttcatg
tttgaccccaaaaggacagtccagcagctgcgagcctgcggggtgttggagacgatccgc
atcagtgctgcaggttttccatccagatggacgtacgaggagttcttctgcaggtaccgt
cttctgctcccaggccctcagagccaggaccaggcccaggccttgtgcagacgggccctg
cctgagctcatccaggacccagaccagtactgctttggaaagaccaaagtatttttccgt
gctggtcaggtggctcttctggagaggctgagagctgagaggctgcgtgttgctgctgtg
atcatccagagccgggtcagaggatggctggtaaggatcagatacaccaggatctgctgg
gcagctgtcaccatacagagatactgcagaggagctctggccagacgactggccctgacc
ctgcgctacaccaaggctgctttagtaattcagaagacttaccgcatggtggtggtcaga
cagttgttcctcatgatccgacaggccaccatcaccatccaggccttcaccaggggcaca
ctggcacgccgcagatacagactgttgttggcggagcgggctgcagtgttgcttcaggcc
agagtgcgtgggtggttggcaaggcaggcgtacaggcgagtacgcgtggcagtggtgttc
atgcagtgctgtgtgcgccgcagggctgccaggagggagctgatgaagctaaagacggag
gcccgctcagtggagaggtacagagagctcaacaagggcatggaggtcaaactgatgcag
ctgcagttaaaagcggaccaggaggccagggagagtgcagctttgagggagaccctgcat
gcagagcgagaggccagcagtgctgagctggaggctctgagggcgacaatacagaaacta
gagagccagatacaggagaagcctcagcctggtcccgtcatcagcgagaaggagatggag
gaaagacggagagctgaggagaaagctgcccaggagatccttcagctcacacaagaatta
caagccctgaagagagagaaggatgatttctgcaaagaaagagaggatctctctgctcgc
ctgcttgaacaagaaaaagctcaagaaaagtgtgtggatcaggctgcgtctcaggcgagt
gcagctctgagggcggagctggatgaggagaggagaaagtatcagggtctcctgagagag
ttcaccagactggaacagagatacgacaacctcagggagatgagtctgctcaccgagcgc
accaagggccacagaagaacggactccactcagagtctgagcttggagcctctttctcct
ctctcaccctcccccactccgctgtcaccccagtctctcaccccactttcactgtcaccc
ttcccatctgccttcccttccccggaggaggtccgcagggtcagcgtgacgtctcactgc
ttggagaggagagtctcagtctggagctgcgacacgccaatggaccagttgatggagagg
atggacgtggccaaagacccgacagtgaaaatgaaaggagaggacctggcacatgcttac
gatgctgtacgagtggccaacaagtttctggagagccagctgcgtagccagcgcagtcag
agagaggaggagctggaggctctgaggtgccagcttagtcaagcggtctctagttgttcc
tctgctgcacagcaacaggaactgcaggagctgctggaggccagagagcaggagtgtgtc
agactgaggagagagctgaaggagcttaaaaacacagtgtcactcagacgactcctgact
caagttctcccatcagctctcaccccagagacgccgtcctctccctctcgaccgaagccc
acagtcactggtttgctggaatgtaggaaaagagatgaaaccaagctcatgaagaacctc
atcacagacatccgtgttgacagcgccctgtctctgccgcctggcctggctgccagcgtg
ctcttcctgtgcgttcgtcaggctgactgtaacggagaccaaactcacacccgctcactc
tgcagcgccgctgtcaccgctatgaaggcagctctgaagaaacatagtaatgatgtagat
atgacagctctgtggctgaagaacgcctgtctgttgcatgacctgttgacccagcactcc
ccaaaacaggcccttgattcagatcaactggtcccactgaacgctgatctgagtgacctg
atccgtgccctgagtgacctctgcatccaggcctatcagcagctcctctccatcactgaa
aaacgcctccaaaacatcatagtcccctctctgttggagagtgagaccataccaggtctg
tctggctcagcagtaaagttgggaacgtccagaaagcgagcaggctcggaccccaggacc
gtgggaggtgatgctcctactatggcggcggtgctgagggagctgggagcacttcacaca
gctttgtcccgtcaggatctgcccctaacacagatggagcaggccttccaccagatcacc
tacctcatctctgcctctgctctcaacagcctgctgctgaggaaagacatgtgctgctgg
agccgtggcgtgcaaatacgttataatgtgagtctcctggaggagtggctgcggagccga
ggtctgcaggcaggtggagctgtggccacactggagcctctcattcaggcagctcagctg
ctgcagactgggaaaaagaccgaggcagaagcacaggctcttgttcagacctgcactgcc
ctgtccagccaacagattgtaaagatcctgaccctctacactcccaacagtgaccttgat
gaaagagtcacactgaacttcatccgaactgtccaggggcttctcaaaggtcgttctgac
ggtcatcctccgcagctcctcatggatgtgaggcgagtgtttccagtcacatttccctac
atgcctcccccagtcctccatgctgagcagttagtcatcccagactccctcaagatctcc
tttcttcgcagagtctag
DBGET
integrated database retrieval system
