Epinephelus fuscoguttatus (brown-marbled grouper): 125896385
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Entry
125896385 CDS
T08419
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125896385 (hps3)
Membrane trafficking [BR:
efo04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
125896385 (hps3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
125896385
NCBI-ProteinID:
XP_049444858
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Position
LG10:11902969..11923523
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AA seq
1076 aa
AA seq
DB search
MVHVYNCHPFASQQIVQVEQEPGLVCCGGGTLFVVATGGCKVEAYSVEQEGCPFICRFAT
MGTVKSIQHSKIGDYLVTIEEKNSATYLRAYTNWRHQAEGKARVGVRLLGHLLRGASMRG
GVQMEIIEIPLSEGPFAVACCPVTGDLLVGCENTLVLFALRRQNQQSLQTQSQQILQSTW
PNSQQSSSQTQGQTSSSNQNFLDFERSVILHLPEIKPKQVALCGAYLAVQAELEVLVLKL
DASSEPNILDESSDTQKHLAADHLEDQADFMVLPRHQELLGDRAKDCDIPVSIEKTGLED
RGQYTLSYVLFRRFTPDFFQGCSVEETQLHSLQLYPLFTSNQSAPLEEPACVFCFFSLPN
AGYLYSLKGGVELLSAYQYPEKVLKAVLTDHLLHVITKSALQCFTVRCAAVAARIEDPYI
DTTMKACPPCSLEVCALRMQLFIGLRSVCVYGRHVILLSTADSETPEEPERITQRRGLEL
KEHTLLTGIFLAVGIDPATTPALESLLSRPFLSRRWTMSSPKETSSAGQGWNIYVVDTVS
PLTLYQEMVEYSQRYAETNPQAQSLRHLLSEAHLLLRASLLQTPEQQPKVEGETDTDRPA
EKQTAVQTDRQELEEALRENCAQLGDCFSRSSQKDCHLALPYYRMSGLSVTEIITRNRPH
PSSPHSYGPGFLFYLKHFLLEETEQILSQEAADEVINIFSQSEPSQLVSVCASPSMINIS
PAQTLQILQHLEDSAGVSVPLTVTMATMMLCLDDLPQYTQLMERHAEMLLVYGFIEEPRL
LLHGGGGGQHAHIRPTALTRQLAKSQPGLLVAAMVALHENNKVQLEQADHIFKELGCGNC
LQVDFWEAMLMASSQDAVIQELLFRLASVYIDRLANTKSDTYSNKPHTPSRRKSLKSADD
LINSCSHYGALYPWLTVLNPAHTTSSQHQEALYKLQSLLCGPSLSVGSVVPLMERLSEET
LWGFSLHLLCATRGGQYDSSIEKLLDRCPQAIIAYANHQLQDKHMALWWQKLLPELCNRT
RAATDNSILLAALKETLVVVAMETSPTEFLELIPDDGTASYFLPHLLTCSQRHLLA
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacgtctacaactgccatcctttcgcctcacagcagatagtacaggtggagcag
gagcctggactggtctgctgtggaggtggaacgctttttgtggtcgctactggaggatgc
aaggtggaggcctacagtgtggagcaggagggctgccctttcatctgtcgctttgccacc
atgggcactgtgaagagcatccagcacagcaagataggagattacctagtgaccattgag
gaaaagaacagcgccacctacctgagagcctacaccaactggcgccaccaggcggaggga
aaggcccgtgtcggcgtgcgtctgttgggccacctgctgcgtggggcgtccatgcggggt
ggagtgcagatggagatcattgagatccccctgtcagagggtccttttgccgtggcgtgt
tgcccagtaactggagaccttctggtcggctgtgagaacactctggttctgttcgctttg
aggaggcagaaccagcagagtctgcagactcagagtcagcagatccttcagagcacctgg
ccgaactctcagcagagctccagtcagactcaaggtcagacctcgagttcaaaccagaat
ttcctggattttgagcgctcagttatcctgcatcttccagagatcaagcctaaacaggtg
gcgctgtgtggagcatatttggccgtgcaggcagagctggaggtgctggttctgaaactg
gatgcatcctctgaaccaaacatccttgatgaatcatcggacacacagaaacatctggca
gcagatcatctagaggaccaggcagacttcatggtgcttccgagacaccaggagctgctc
ggcgatcgagccaaagactgcgacatccctgtcagcattgaaaagaccgggcttgaggac
agaggacagtacacgctgtcatatgttctcttcaggcgttttactccagacttcttccag
ggctgcagcgttgaggagactcaactccactccctacagctttacccacttttcaccagt
aaccagtcagcgcctctggaagaacctgcatgtgtgttctgctttttctctctccccaac
gccggctacctgtacagtttgaagggtggtgtggagcttctctcagcctatcagtatcca
gagaaggtcctgaaggcagtgctaacagaccacctgctgcatgtcataacaaagagtgca
ttacagtgtttcacagtgcgctgtgcagcagtagcagccaggatagaagacccctacatc
gataccaccatgaaggcctgtccaccctgcagcctggaggtgtgtgcgctcaggatgcag
ttgttcattggtctgcgctcggtgtgtgtttacggccgtcatgttatcctgctctccacc
gctgactcagagacaccagaggagcctgaacgcatcacacaacgcagaggcctcgagttg
aaagaacacaccttgctgactggtattttcctggcggtgggaatcgatcccgcaaccaca
ccagctctggagagccttctatcacggcccttcctgagcagaaggtggacaatgtcttct
cccaaagaaaccagctcagccggacaaggatggaacatctatgtggtcgacactgtctcc
cccctcactctctaccaagaaatggtggaatacagccagcggtatgcagagaccaacccg
caggcccaaagccttcggcacctcctcagtgaggctcacctccttctccgcgcctcctta
ctccaaacacctgagcagcaaccaaaagtggagggtgagacagatacagacagaccagct
gagaaacagacagctgtacagacagacaggcaagagctggaggaggcactcagagagaac
tgtgcacagctgggagactgtttcagcaggagcagtcagaaggactgccacctggctctg
ccgtactacaggatgtctggtctgtcagtcacagagatcataaccaggaatcgcccgcat
cccagcagccctcactcctacggccccggctttctgttctacctgaagcatttcctgtta
gaagaaacagagcagatcctcagtcaggaagcagctgatgaggtcataaacattttcagc
caatcggagccctcacagcttgtcagtgtgtgtgccagcccgtccatgataaacatcagc
cctgcacagacgctgcaaatcttacaacatctggaggactctgccggcgtgtcagtccct
ctgacagtcaccatggcaaccatgatgctgtgcttggacgacctgccacagtacacacag
ctgatggaaagacatgcagagatgctgctggtgtacgggttcattgaggagccgaggctg
ttgctgcatggcggaggtggaggtcagcatgcacacatccgtcccacagcattgacacgc
cagttggcaaagtcccaaccaggactgctggtggccgccatggtggctttacatgaaaac
aacaaagttcagctggaacaggctgatcacatattcaaggagctgggctgtgggaattgc
ttacaggtggatttctgggaggcgatgctcatggcttcctcacaggacgctgtcatccag
gaacttctgttccgtctggcgtctgtctacattgaccgactggccaacaccaaatcagac
acatactccaacaaaccacacacaccctcaagacgcaagtcgctgaagagtgctgacgat
ctgataaactcatgctctcattatggtgctctgtacccatggctcactgttctcaatcca
gctcacactaccagctcccaacaccaggaggcgctgtacaaactgcagtccctcctgtgt
ggtccgtccctgtctgtgggctccgtcgtgcccctgatggagcgtctgtcagaggaaacc
ttgtggggcttcagcctgcacctcctctgtgcaaccagaggggggcagtacgacagcagc
attgaaaagctgctggatcgctgtcctcaggccatcatagcctacgccaaccaccagtta
caagacaaacatatggcgttgtggtggcagaagctgctcccagagctgtgcaacaggacg
agagctgcaacagataacagcattttactggctgctctcaaagagacgctggttgtggtt
gccatggagacaagccccacagagttcctggagctgatacctgacgatggcaccgcctca
tactttctgccacacctgttgacatgtagccagagacacctactggcctga
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