Epinephelus fuscoguttatus (brown-marbled grouper): 125896590
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Entry
125896590 CDS
T08419
Symbol
arid1b
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125896590 (arid1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125896590 (arid1b)
03021 Transcription machinery [BR:
efo03021
]
125896590 (arid1b)
03036 Chromosome and associated proteins [BR:
efo03036
]
125896590 (arid1b)
Transcription factors [BR:
efo03000
]
Eukaryotic type
Helix-turn-helix
ARID
125896590 (arid1b)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125896590 (arid1b)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125896590 (arid1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
125896590
NCBI-ProteinID:
XP_049445200
LinkDB
All DBs
Position
LG11:1334315..1376224
Genome browser
AA seq
2271 aa
AA seq
DB search
MNNVDGHPGADPSRAPGGRNTSPAAGGEARTGRGDQTPGSASTVTDMETGMLGGHKVISS
RGGAAAGGVAPPPPPLPPPPPSTSSSSSSSSHHTPPPFSQFIQQLHHHHQLHQQRLRPVN
IPDSSSIQRGQRGQSGGERQHHGGEGNLLLVGNSRAEERHQQHQLNRSEEEEEAEEEEEE
RMDASLGSATNTTTNNNNNPPPRGTSSEFNHYYGNGRGGPCFDQHGGQQSPGTGVTAAAL
SAHSTMDQVHNSHEGYSNNSPYNHYPNYRPGYGTSGYGGMMSPSRQGNNLMGPGGGSSAK
AAMIATSSPAGGGGGNNGGFQRFPGQGQQQQQQQHPSGATPTLNQLLTSPSPMMRGYGSG
YPDYNNPSAQQQPSMGPAKDMGSQYGSAAAAAAHGWAGQQRSHPAMSPGSNGQGGGRSQV
PPMDPMAMKRSQLYGMSNNPYSQQQGAPYSGQAYGAPSPHRYPMGMASRGQMGMGAMQYP
QQQMGSQYSQQQQQQQQQQSVGGYCQPGQPPYFSPPQQQPAAPSHPPYMQPRPLPQQEVP
QEAYGGRGQSAAMTPGKPNHEEMSLSQQERPSSLPDLSGSIDDLPTGTEAAVSSGASGSG
SAQGDQGTPARSPFSPHVSPRLPPPARTGPSPSPSPSPAGSSSQSRSGPMSPATSGPGPQ
LTPQVSGPGSDGGPQSAPPQDRGFPPSMQRSTPGPQFGPQQSAPPMSPHPAPGGTMHHGS
YQQGASYGQYGPPGNFPRPPHYGGAPSANYSGPGPGPGLANSLGLNASSPMHGQGPSTPA
GRGPGPGAGGRPYPAGGSAMAPTSPGMPQPAGQGMGPPGPNASRKLPEVGPNAGSSANSL
SSSTSASVAAAVAQSRPPFARSPAYHNQSWPGGRPALSPTLHPSHPPHPPHPPHPPHHSQ
QGTTAQPQPAVQTPPEHYGQGSYLGMAPMGGMGPGGPGGPGGPGGPGGPYSQQAGSNSGR
MTPQGPPYSAPPSGPMMMSADGMGAHPDAKQRLELSKEGVCPATAEPPKPKCVSQPPTPS
PMSPSSASLSSCHGEDSDSISSPAWSKTSTSPKPNVATMTNEKITRLYEMGSEPERRLWV
DRYLTFMDERGTPVPNLPAVGKKPLDLCRLYMAVREIGGLAMVNKNKKWRELSSLLNVGT
SSSSASSLKKQYIQYLFAYECKVERGEEPPPEALGPTGDTKKPLSLQAKIQPPSPANSGS
LQGPNTPQSSSSSLTEAPGDLKPPTPASTPHSQMGPHPGNRNMVGVSVQDPFSEGSDPAF
HSKRGPGGAPYQQGGGPTDPSMRMQYDANKDPYGGPRKGPGPGEAFGPSQMPSGAMQDMY
PRGPPSGPLTGMGPRPQYPYGPGYERRPDHVMGPDAAMAPPGGQNSMGPSGNESSMYPAN
RYPHQRHGHDGYGQQYPHGMAYTSHQPLYPQQQGYKRAMEGIYPPAKRHEGEAFTVQQFG
SQQPDMFGPYSGGGGGSYMGPERRPVQGQYPYPYARDRQGPPQHGMMGSGPPAVSGGPGE
GPQPNMWHPRTDMGYTYSRQGQGPPYPGMGRGDDQEGRAPQDSQWPPSHPGQRQPPFPPH
SSSSSPSMPPLPSRQPPSSFQATPTVPNHVTRSHSPSSFPRPLGGSLSPNSAPYLPSMKK
PGPPPTQGLPIIHREVSFPPSSVEATPPKLKPRRRLTSKDTGTPEAWRVMMSLKSGLLAE
SSWALDTINILLYDDSTVGSFSLTQLPGFLELIVEFYRRCLIQIFGILEEYEVGTEGQRT
LLGPLPDPPEEQQEVLREPPADGPSAEELRTPRRLIEEMEERMEVLLTAAPDTEEEVKDS
EPVVKEEAEVVKEEHQEQAEPRPLQASKYDKLPIKVEEEGKEWEEVEERWAELRRPNGFI
SGLLHWKAGGGDSTAHIQTGERDGRRGGDEGRRQETGGGGDRQEEVEERSPPAGEETPPE
SQEGVLLEVRGQRSPVAQSPLSQLEDEPRCWDEAPLSTAESWQDSLAKRCVCISNIVRGL
SFVPGNDADMSRHPGLLLILGRLVLLHHHHPRRKRTPPSYQREEEQGLACSRDEWWWDCL
AALRENTLVTLANMSGQLDLSQYPESICLPILDGLLHWMVCPSAEAQDPFSAAGGGSSLT
PQRLVLECLCKLSIQDCNVDLLLATPPFSRQQKLYATLMRLVGERKSQVCREMAVAVLSH
LAQGDPTAARSIALQKGSVGTLIGFLEDSVAVAQYQQSSHSMLHAAAPPEPPSVNMMCRA
AKALLAMAKVEENRSEFVLYESRLLDISLSAALNTSVAAIMCEVLFKIGRS
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgtagatgggcatcctggagcggatcccagtcgggctccggggggcaggaac
accagccccgctgcaggaggagaagcacggacaggacgcggtgatcaaaccccggggtcc
gcgtccaccgtgaccgacatggagacggggatgctcggcgggcacaaagtgatcagcagc
cgtggcggagccgctgctggtggtgttgcacctcctcctcctcctcttcctcctcctcct
ccatcaacatcatcatcatcatcatcatcatcccaccacacacctccgccgttcagccag
tttatccagcagctccaccaccaccaccagctccaccaacagcggctgcgacccgtcaac
atcccagacagcagcagcatccagcggggccagaggggacagagcggcggggagcgacag
catcatggaggggaaggaaacctcctcctggtggggaacagccgagcagaagagcgccat
cagcaacaccagctgaacagaagcgaggaggaggaggaggcggaggaagaggaggaggag
cggatggatgccagcctcggatcagccaccaacaccaccaccaacaacaacaacaaccct
cctccaagagggaccagctccgagtttaatcattattatgggaatggaagaggagggcct
tgctttgatcaacatggcggacaacaaagcccagggactggggtaacagcggcggcgctc
tcggcacacagcaccatggaccaggttcacaactcccacgaaggctacagcaacaacagc
ccgtataaccactacccgaactatcggcccggctatgggaccagtggatacgggggcatg
atgagtccctcccgccaggggaataacctgatgggcccgggcggcggcagctcggccaaa
gcggctatgatcgcgaccagctccccggctggaggcggcggcggcaacaacggaggattc
cagcggttccccggacagggtcagcagcagcagcagcagcagcacccctccggagctaca
ccgactctaaaccagttattgacgtctccgagcccgatgatgagaggttatggaagtgga
tatcctgattataataatccttccgcacaacaacagccgagcatggggccggctaaagac
atgggctcccagtacggctcggcggcggcggcggcggctcacggctgggcaggacaacaa
agaagtcacccggccatgagccccgggagcaacgggcagggcggcggcaggtctcaggtg
ccgccgatggacccaatggcgatgaagcgctcgcagctctacggcatgagcaacaacccg
tactcccagcagcagggggcgccgtactccggccaggcctatggcgccccctccccccac
agatacccgatggggatggccagcagggggcagatggggatgggagcgatgcagtaccct
cagcagcagatgggttctcagtacagtcagcagcagcagcagcagcagcagcagcagagc
gtgggaggttactgtcagccgggtcagccgccgtacttcagccctccacagcagcagccc
gccgccccgagccacccgccgtacatgcagccacgcccactgcctcaacaggaggtgcct
caggaggcatacgggggccgaggccagtctgctgctatgactcctgggaaaccaaaccac
gaggagatgagtctgagccaacaggagaggccgtccagcctgccggatttatccggctcc
atcgatgacttgcccactggcaccgaggcggcggtgagttcaggggcgtcgggctccggc
agcgctcagggcgaccaggggactccagcacgttctcctttctcccctcacgtctcacct
cgactccccccgccggctcgcaccgggccctcgccctccccgtcgccgtcccctgctggg
tccagcagccaatcacgatccggtccgatgtcccccgccaccagtggaccaggccctcag
ttgacccctcaggtctctggtcctggatcagacggcggccctcagtcggccccgcctcag
gacagaggtttccctccctccatgcagcgtagcaccccggggcctcagtttggccctcag
cagtcagcaccgcccatgtcccctcacccagcgccggggggcaccatgcaccatggctcc
taccagcagggggcgtcatacggccagtacggacctccaggtaactttccccggcccccc
cactacggcggggcccccagtgccaactacagcggccctggcccgggtcctggtttagcc
aacagtctggggttgaacgccagcagtcccatgcacggtcagggcccgtccaccccggca
ggtcgcggccctgggcctggtgccgggggccgaccttaccccgccggagggagtgccatg
gcccccacctcccctggcatgccacagcccgccgggcagggcatggggcccccggggccc
aacgccagccgcaaactgcctgaggtcggcccaaatgctgggtcgagtgccaactccttg
tcatcctcgacctccgccagcgtcgccgccgctgtcgcccagagcaggcctccctttgct
cgttccccagcctaccacaaccagtcctggcccggcggtcgacctgccctctctcccacc
cttcatccctctcatcctcctcaccctcctcaccctcctcaccctcctcaccactcccag
caggggaccactgctcagcctcagcccgccgtgcagaccccccctgagcattatgggcag
ggtagctacctgggcatggcaccgatgggagggatgggccctggaggccctggaggccct
ggaggtcctggaggtcctggaggtccctacagccagcaggcaggcagcaactctggtaga
atgacgccgcagggaccgccctacagcgccccaccctcagggcccatgatgatgtcagca
gacgggatgggagctcatccagacgcaaagcagcggctagagctcagcaaagagggcgtc
tgtccagccaccgccgaacccccgaaacccaagtgtgtgtcccagccccccaccccgtcc
cccatgtcccccagctcagctagtctgtcctcctgtcacggggaggacagtgatagcatt
agcagccccgcctggtccaagacgtcaaccagccccaaacccaatgtggccaccatgacc
aacgagaagatcacccggctgtacgagatgggctctgagccggagaggaggctgtgggtg
gaccgctacctgaccttcatggacgagagggggacgcccgtcccaaacctgcccgccgtc
gggaagaaacctctggacctctgcagactgtacatggcggtcagagagatcggaggactg
gccatggtgaacaagaacaagaagtggagggagttgtcgtccctgttgaacgtggggacg
tccagcagctcggccagctctctgaagaagcagtacatccagtacctgttcgcctacgag
tgtaaggtggagcgaggggaggagcctccacctgaggccctgggccccaccggagacacc
aagaaacctctgtccctccaggccaagatccagcccccgtccccagcgaactcgggctcc
ctgcagggccccaacacccctcagtcaagcagcagctccctgaccgaggcccctggagac
ctgaagcccccgaccccagcctccaccccgcacagccagatgggcccccaccctggaaac
aggaacatggtcggggtgagcgtccaggacccgttctctgaaggcagcgatccagccttc
cacagcaagcgaggccccggcggcgccccctaccagcagggcggaggccctacagacccc
tcgatgaggatgcagtacgatgccaacaaagacccgtacggaggaccgaggaaaggtccg
gggcccggcgaggcctttggtcccagtcagatgcccagcggtgccatgcaggacatgtac
ccccgtgggccgccctctgggcccctgacagggatgggccccaggccccagtacccctat
ggccccggctacgaacggaggccagatcacgtgatgggaccagacgcagccatggcgcca
cctggaggtcagaacagtatgggtccatctggaaacgagtcgagcatgtaccccgccaac
agatacccccaccagagacacggacacgacggttacgggcagcagtatcctcacggcatg
gcctacacttcccatcagcccctgtaccctcagcagcagggttacaagcgtgcgatggag
gggatttaccccccggcgaagcgtcatgaaggcgaggcgttcacggtgcagcagtttggc
tcccagcagcccgacatgttcggcccctacagtggaggaggcggtgggagctacatgggc
cccgagcggcggccggtgcagggccagtacccgtacccatacgcccgggaccggcagggc
cccccacagcacggcatgatgggctcaggaccaccggcggtgtccgggggccccggggag
gggccgcagcccaacatgtggcaccccaggacagacatgggctacacgtacagccggcag
ggccaggggcccccctaccccggcatgggccgaggagacgaccaggagggccgggccccc
caggacagccagtggccccccagtcatccaggacaacgccagcccccattccccccacac
tcctcctcctcctccccctccatgccccccctgccctccagacagcccccctcttccttc
caggccacgcccaccgtccctaaccacgtgacccgctctcacagcccctcctccttcccc
cggcctctggggggctccctgtcccccaacagcgccccctacctgccctccatgaagaag
ccggggcccccacccacacagggcctccccatcatccacagagaggtcagcttccccccc
agctctgtggaggccacgcctcctaaactgaagccacgacgccggctcacctccaaggac
acaggaaccccagaggcgtggcgggtgatgatgtcactgaagtcgggcctgttggcagag
agcagctgggctctggacaccatcaatatcctgctgtatgacgacagcacggtgggctcc
ttcagcctcacacagctgcctggtttcctggagctcatcgtggagttttaccgccgctgc
ctcatccagatcttcgggatcctggaggagtacgaggtgggaactgagggccagaggacc
ctgctgggacccctgcctgacccccctgaggagcagcaggaggtgctgagggagccacca
gctgacggcccatcagccgaggagctgaggacaccgaggaggctgatcgaggagatggag
gagaggatggaggtgctgctcacagctgctcctgacacagaggaggaggtgaaagacagc
gaacctgtcgtcaaagaggaggcggaggttgtgaaggaggagcaccaggagcaggcagag
ccccgccccctgcaggcaagcaagtacgacaagctgccaatcaaggtggaggaggagggc
aaggagtgggaggaggtggaggagcgctgggccgagctccgccgacccaacggcttcatc
agcggcctcctgcactggaaggccggaggaggagactccaccgctcacattcagacaggg
gagagggacgggaggaggggaggagacgaggggaggagacaggagacagggggaggaggt
gacaggcaggaggaggtggaggagaggagcccaccagccggagaggagacgccacctgaa
agccaagaaggcgtcctgttggaggtcagaggtcagaggtcgccggtggcccagagtccc
ctcagtcagctggaggatgagcctcgctgctgggacgaggctcctctgtccaccgccgag
tcgtggcaggactctttggctaaacgctgcgtctgcatctccaacatcgtgcgcggcctc
tccttcgtccccggcaacgacgccgacatgtcgcggcacccgggcctgttgctgatcctg
ggccggctggtgctgctgcaccaccaccacccgcgcaggaaacggacgccgcccagctac
cagcgggaggaggagcaagggctggcctgcagccgggacgagtggtggtgggactgcctg
gcggcgctcagggagaacacgctggtgacgctggccaacatgtcgggccagctggacctg
tcgcagtaccccgagagcatctgcctgcccatcctggacgggctgctgcactggatggtg
tgcccgtccgccgaggcccaggacccgttctccgcggcgggcggcggctcctcgctcacg
cctcagagactggtgctggagtgtctgtgcaagctgagcatccaggactgcaacgtggac
ctgctgctcgccacgccgcccttcagccgccagcagaagctctacgccacgctgatgcgc
ctggtgggcgagaggaagagccaggtgtgtcgggagatggcggtggccgtgctgtcccac
ctggcgcagggtgacccgacggcggcacgttccatcgccctgcagaagggcagcgtggga
actctgatcggcttcctggaggacagtgtggcggtggctcagtaccagcagagctcgcac
agcatgctgcacgccgccgcgccgccggagccacccagcgtcaacatgatgtgccgtgcc
gccaaagcactgctggccatggcgaaggtggaggagaaccggtcggagtttgttctgtac
gagagccggctgctggacatctcgctgtcggccgccctcaacacctcggtggcggccatc
atgtgtgaagtactgtttaaaatcggccgctcgtga
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integrated database retrieval system
