Epinephelus fuscoguttatus (brown-marbled grouper): 125896923
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Entry
125896923 CDS
T08419
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo00100
Steroid biosynthesis
efo01100
Metabolic pathways
Module
efo_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
125896923 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
efo01006
]
125896923 (fdft1)
Enzymes [BR:
efo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
125896923 (fdft1)
Prenyltransferases [BR:
efo01006
]
Terpene biosynthesis
Squalene/phytoene synthase
125896923 (fdft1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
GST_C_8
Motif
Other DBs
NCBI-GeneID:
125896923
NCBI-ProteinID:
XP_049445855
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Position
LG11:15533875..15545651
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AA seq
457 aa
AA seq
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MAGACCKCPVSLSVFKRSFSVAPRGSGSAPRCLLPGRRLGERGLQEAARPSSVFRPAGFY
RHTTFFCLSCQEAMTESLRTCYLYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTV
EDDMTIPLDKKVPMLNDFHTYLYQDEWCFTESQEKDRQVLADFPTISLEFRNLAQEYRDV
ISDICHRMGVGMAEFLEKKVGSMKEWDLYCHYVAGLVGIGLSQLFSASQLEDPEVGRDTE
LANSMGLFLQKTNIIRDYLEDTQEGRAFWPQEAWSQFANRLEDLAQPEKLESALSCLNML
VTDALRHVPDVIAYLSRLRNQSVFNFCAIPQVMAIATLSTCYNNPMVFQGVVKIRKGQAV
TLMMEATNMTAVQTIISQYSQEILQKVSLTDLSRDKTLHILAVIQEKSALSQSSLPSRTP
HLSPMYLSAAMLLAALSWQYLSTTAAQAQGTGDMQGQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcatgctgcaagtgtccagtctctctgtccgtgttcaagcgctctttctcg
gtggcgccgcggggcagcgggtccgctcctcggtgcctcctgccgggccggaggctgggg
gagcggggccttcaggaggccgcccgaccctccagcgtcttcagacctgcaggcttttac
cgacacacgaccttcttctgtctctcctgccaggaggccatgacggagagtctgcggacc
tgctatctgtacctgaaccagaccagtaggagctttgcagctgtgatccaggcgctggac
ggggagctgagacatgccgtttgtattttctacctggtgctgcgagcactggacacagtg
gaggacgacatgaccatccctctggataagaaggttcccatgctgaacgacttccacacc
tacctgtaccaggatgagtggtgcttcacagagagccaggagaaggaccgacaggttctg
gcagatttccccacgatatcactggaattcagaaacctggctcaggaatacagagacgtc
atctcagatatctgccaccgtatgggagtcggaatggctgaattcctggaaaagaaagtg
ggatccatgaaggaatgggacctgtattgtcactacgtggcggggctggtgggtatcggt
ctgtcccagctgttctctgcgtcccagctggaggaccccgaggtggggcgcgacaccgag
ctggccaactccatgggcctgttcctccagaagaccaacatcatccgagactatctggag
gacacgcaagagggacgtgccttctggccacaagaggcttggagtcagtttgccaatcgg
ctggaggacttggctcagcctgagaagctggagtcggctctctcctgcctcaatatgctg
gtcactgatgctctgcgacatgtacccgatgttatcgcctacctgtcccgcctgcgcaac
cagagcgtcttcaatttctgtgccattccacaggtgatggcaatagctacactgtcgacg
tgctacaacaaccccatggtgttccagggagtggtgaagatcaggaagggacaggcagtc
acactcatgatggaagccaccaacatgacagctgtgcagaccatcatctcccagtacagc
caggagattctacagaaggtctccctcacggacctgtcgcgggacaagaccctgcacatc
ctagctgtgatccaagagaagtccgccctgtcacagtccagcctcccctccaggaccccc
cacctgtcgcccatgtacctgtctgccgccatgctgctcgccgctctcagctggcagtac
cttagcaccaccgcagcacaggcacagggcactggagacatgcagggacagtga
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