Epinephelus fuscoguttatus (brown-marbled grouper): 125897359
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Entry
125897359 CDS
T08419
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
efo04990
]
125897359 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
efo04990
]
Other domain-containing proteins
Patched domain-containing proteins
125897359 (ptchd4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
DUF7041
Motif
Other DBs
NCBI-GeneID:
125897359
NCBI-ProteinID:
XP_049446617
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All DBs
Position
LG11:42816054..43087283
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AA seq
925 aa
AA seq
DB search
MCFIGGDGASASWILWRMLRQVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPETDLEVLVAPTHSLAKIERSLANSLFSIDQSKHKLYSDLHTPGRYGRLILLAKS
GGNILELADQVLQVHKQILDLRVNYKGFNYTFAHLCVLSHRDKRCLLDDIITIFEDIRQA
VLSNSTFHKVPVSYPNTTLKDGRVSFIGHQLGGVSFSPNSRDQQVKFARAVQITYYLRNH
GPVVQDAIAERWENEFCALVSRLSTAEAPHVSDQLHIQSLTSFSLWRDFHQTGVLAKGEV
LVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGI
PFFAMGHGTKGVFELLAGWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGASP
FTNIESVKIFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDR
QPTWFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASF
SFMGCLQISDGSNIVNLLASNSPSVSYALTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEH
LKTLSHGFNKISWMDNFFHYLRVVNVSASTKSDFITILKGSFLRSPEYQHFTEDIIFSKN
RETDEYDIIASRMYLVARTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRYSS
SVISPILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSISI
LCLIYTLNFAMDHCAPHLYTFVLATEHTRTQCIKLALEEHGAAILQNTSCFVIGIMPLVF
VPSNLTYTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKERERERERE
REREREREEIECIEVRENPDHVTNV
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcatcggaggagacggggcatctgcaagctggattttgtggaggatgctgcgg
caagtgatacacagagggctcaaggcttcgttttactggctgggcttattcgttagcagg
caccccgttttcttcctcactgtccccgcggtcctcaccatcattttcggatctaccgtg
ctgagtcggttcaagccggagacggacctggaggtgctggtcgccccaactcacagcctg
gcgaagatcgagcggagtctcgccaacagcctgttttccatcgaccagtcgaagcacaag
ctgtactcggatttgcacacccccggcagatatggcaggctgatcctgctggccaagtcc
ggggggaacatcctggagctggccgaccaggtcctgcaggtccacaagcaaatcttggat
ttgcgcgtcaattacaagggattcaattacacgttcgcgcacctctgcgtgctgagccac
agggacaagcgctgcctcttggatgatatcatcaccatcttcgaagatatcagacaggcc
gtgctttccaacagcacttttcacaaggtgcccgtgagctatcccaacacgacattaaag
gatggccgtgtgtccttcattggccaccagctgggtggtgtgtccttctcacccaacagc
cgtgaccagcaggtcaaatttgcccgcgctgtccagatcacctactacctccgcaaccat
ggcccagtggtgcaggatgccattgctgaacgctgggagaacgagttctgcgccctggtg
agccgactgtctacggccgaggcgccccatgtgtctgaccagctccacatccagtcactc
acctccttcagcctgtggcgggacttccaccagacaggtgtactggccaagggggaggtg
ctggtgagcctggtgctggtgctcctggctgcaaccatctccagctctatgcgggactgc
ctgaggggaaagccattcctgggcctcctgggcgtgctgactatctgcattgccaatgta
acagctgcaggaatcttctttatatcggacgggaagttcaactcgacactactggggatc
ccattctttgccatgggccatggaaccaaaggggtgttcgaactgctggcaggatggagg
agaacaagggaaaatcttcccttcaaggagcgcgtagcggacgcttttgcagatgtgatg
gtgtgctacaccatgaccagctcactttacatcatcacctttggcatgggagccagccct
tttacaaacattgagtctgtaaaaattttctgccagagcatgtgcgttgccatcctggtc
aactacttctatgttttctctttctatggctcctgcctggtgtttgccggacagttggag
cagaaccgctaccacagtgttttctgttgtaaaatcccctcagttgagtacctggaccgc
cagcccacgtggtttaagaccatgatgagtgatggccatgacttgtccacacaccacgac
agcgtcccttaccagaatcacttcatccagcacttcctgcgtgagcactatacagaatgg
attaccaacacctatgtcaaaccctttgtggttattctatatctcatatatgcctctttc
tcattcatgggatgtttacaaatcagtgatggatcaaatattgtcaacctgctggctagt
aactctccaagtgtttcatatgctctgacccagcagaaatacttcagtaactacagtcct
gtgattggattttacatttatgagcccatcgagtactggaactccacagtgcaggagcac
ctaaagactctgagtcatggcttcaacaagatctcttggatggacaactttttccactac
ctgcgggtagtgaatgtgagtgcgtcaaccaagagcgacttcatcaccatcctcaagggc
tcctttctgcgcagcccagagtaccagcattttactgaggacataatattctccaagaac
cgtgagactgatgagtatgacatcatcgcctcacggatgtacttggtggcacgaacaaca
gagaagaagcgtgaagaggtggtggagcttctggaaaagcttcgtccattgatgctgatt
aacagcatcaagttcattgcattcaatcctacgtttgtgttcatggaccgctacagctcc
tctgtcatctcacccatcctgacctcaggcttcagcgtactcacaatcctcatcctcact
ttcttcttagtcatcaaccctttggggaacttctggctcatccttaccgtaacatctgtg
gagctgggtgtcttgggtttgatgaccctctggaacgttggcatggacagcatctcaatc
ctgtgccttatttatacccttaactttgccatggatcactgtgcaccacacctgtacact
tttgtgctagccacagagcacactaggacgcagtgcatcaagttggcactggaggagcac
ggggcagccatcctacagaacacatcctgctttgtgatcgggatcatgcccctggtgttt
gtgccttccaatctgacctacacactgtttaagtgctccctgctcacagcgggttgcacc
gttctgcactgctttgtcatcctgccggtcttcctgaccttcttcccgccatctaaaaag
agacacaagaaaaagaaacgggccaagcgtaaagagcgggagagggagcgggagcgggaa
agggagagggaaagagaaagggaggagatagagtgcatcgaagtcagggagaatcctgat
catgtgacaaacgtttga
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