Epinephelus fuscoguttatus (brown-marbled grouper): 125897758
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Entry
125897758 CDS
T08419
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efo04515
]
125897758
Cell adhesion molecules [BR:
efo04515
]
Immunoglobulin superfamily
DSCAM family
125897758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
C1-set
Ig_6
Sp38
Receptor_2B4
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
125897758
NCBI-ProteinID:
XP_049447063
LinkDB
All DBs
Position
LG12:complement(41617136..41691010)
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AA seq
2127 aa
AA seq
DB search
MHSSLGRRGGDMGGAEAPLISPPCLAGQQGWRDLRGAQSPVQHGDPPGQKTAPHTCQDCQ
IFLKNIPAIYGMWLVTLLLLYSLQEVHSEDVGSTRLYFVNASLQRVTYSSSVGVSLPCPA
GGTPSAILRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQA
GKIRSPNIRIKAVFREPYTVRVADQRSMRGNVAVFKCLIPAAVQEYVSVVSWERDTVSIV
PGNRFSLTSFGALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPNESSPTIL
DSFQAGEVQAGQSIELPCIAGGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDS
GSYACEVTNSFGSKEVSGQLHVIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTINWY
SNTEPIVPDQHISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPR
IVSSFSERVVNPGEPFSLMCAAKGAPPPSITWTLDDEPVVRDSTYKTSQYTLSDGLTVSH
VNVSSPLIRDGGVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVI
GYPYYSIKWLKDGMQLPDNHRQVVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTV
HVTVKVPPLIQPFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVAIET
KEFMSSLQISKVTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDCIYGKAG
VLNCSVEGYPPPKVMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLC
QASNGVGSDISKSMILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDT
VIDAERNPRYSITINKKGDEVISTLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEP
PDPPELEVREVKDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQA
NIVELHPACVYSIRMYSYNKIGRSLPSKELTISTEEAPPDGPPMDVILQPMTSQSIRVTW
RAPKKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQ
AFNRAGTGPSSTEINATTLEDVPSEPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYR
VVFWSLFPDGGGCCGGQAHWPMQKWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAG
DGVRSNVLYIQTREDLPGPPAGIKAVPSSPSSVVVSWLPPHKPNGVIRKYTIYCSSPGSG
QPAPSEYEANPEMLFYRITHLTRGKQYHIWAAAVTTAGRGNISSKVTVEPAGKVPAKILS
FGGTVTTPWMKEVRLPCSSVGEPAPTIKWTKDSEDSAIPVTADSQRQILSNGTLVLRSVK
AEDSGYYTCTATNTLGFDTIIVNLVVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIR
GFVLQYSVDNTEEWRDVFISSSERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKT
HGREPVFNKDQPLLTHINSTHAGLNLQGWTSGGCPITDMMLDFRPKGTWAWQSLKANSTT
QLFLSELREATWYELKMKACNSAGCGNQSSQFATTDYDGSTIPPIKSARGEGDDVKKLFS
IGSPVILVTLGVALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPR
LHIDIPRVQLLIEDKEGIKQIGEDKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSG
PLIDMSDIRPGTNPVSRKSIKSAHSSRNRYSSQWTLSRPSQSQSTASARTLTSDWRTMGS
HGITATESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTIT
ECFISDSSSDQMTTGTNDPADSMTSLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHR
ANKSEFCNLPLYMKTDPFFRKQGELHDPCPAVPPREASIRSLTQRAYHTQGRHKTLDPAK
QQVLTLGHSGLGSLGASSGTATLPQRTLTMPSSNTAATASTSSTSSNPTNSNKVGGSRDS
LLESSSSALGRLQKQSVGAYSKSYTLV
NT seq
6384 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtagtcttgggaggagaggaggggacatgggcggggccgaggcgcctctcatt
tcccctccatgcttagcggggcagcagggctggagagacctccggggagcacagtcgcca
gtccagcacggagacccgcctggccaaaaaaccgcgcctcacacttgccaggattgccaa
atattcctgaaaaatatacctgctatttatggcatgtggcttgtaactttactcctgctg
tactctctccaagaagtacacagtgaggatgtgggctccaccaggctgtactttgtgaat
gcctccctgcagagggtaacctactccagctcggtgggggtgtccttgccctgtccagca
gggggcacccccagtgccatactgcgctggtacctggccaccggcgacgacatctacgac
gtgccccacatccgccacgtgcacgccaatggcaccctacagctgtaccccttctcgccc
tccgcctacaacagctacatccacgacaacgactacttctgcacagccgaaaaccaagcc
ggcaagatccgcagccccaacatccgcatcaaagctgttttcagggagccctacactgtg
cgggtggcggaccagcgttcgatgcggggcaacgtagctgtgttcaagtgcctcatcccc
gccgccgtgcaggagtacgtcagcgtcgtgtcctgggagagagacactgtttccatcgta
ccaggtaacaggttctcgctgacctccttcggggctctttacatctctgatgttcagaag
gaggacgccctctccacgtaccggtgcatcaccaaacataagtacagcggcgagacgcgc
caaagcaatggagcgcggctctctgtaatggaccccaacgagtcctcacccaccatcctg
gacagtttccaagcaggggaggtgcaggcaggccagagcatcgagctcccctgcatagcg
ggagggtaccccagccccactgtgcgttggctgaaagatggtcgcccattgccctcagat
gcccgctggacacggcgtttgacagggctgaccatcagtgacctgaggcaggaggacagc
ggcagctacgcatgcgaggtcaccaacagttttggctcaaaggaggtgtctggacagctt
cacgttatagatccacttcgtgtgaccttgtcccctaagaatctgaaaactggcatcagc
agcaccctgttcttcacctgcactgtggagggctccccagaatacaccatcaactggtac
agcaacacggagcccattgtccccgaccagcacatctccatccagggacaacacaacgac
accttgcagatcactgcagcacagaagtttcactctggggcttaccagtgcttcgcctcc
cgaaagggccacactgctcaggacttttccattattctgctcgaggatggaactcctcgt
attgtgtcttccttcagcgagcgggtggtgaaccccggcgagcctttctccctcatgtgt
gctgccaaaggagccccgcccccctccatcacctggacgctggacgacgagcccgtggtg
cgagactccacctacaagaccagccagtacaccctgtcggacggcctgaccgtgtcacac
gtcaacgtcagcagcccgctcattcgagatgggggagtgtatcgttgcgtcgcacgcaac
tcggccggtagcgccgagtaccaagcgcgcataaacgtaagaggtccaccccgaatcaga
cccatgcgggacatcaccgcagtggcgggcaggaacacctacataacgtgccgcgtgatt
ggctacccgtattactccatcaagtggctgaaggacggcatgcagctgcctgataatcat
cgtcaagtggtgtttgagaacggcaccctgaggctgacggacgtgcagaagggcgcggat
gagggcacctacttgtgtagcgttctgatccagccccaggtgtcaatcaaccagaccgtc
catgtcactgtaaaagtgccgccgctcatccagcccttcgatattccctctacctcagtg
gggaagctcatgtacattgcctgcgtggtgtcatctggggacatgcccatacgcatcacc
tggcacaaagacggccagctcatcgtgccaggttccgcctctggcgtcgcaatagagacc
aaagagttcatgagctccctgcaaatatccaaggtgacactgaagcacaacggaaactac
acctgcatcgccagcaacgccgccgccaccgtcagctgggaaagacagttgattgtcact
gtgccaccgcgtttcgtggtgcagcccaacaatcaagattgcatctatggcaaagctgga
gttctcaactgctctgtggagggttatccacctccgaaagtcatgtggaaacatgccaag
ggtgtaggaaaccctcagcagtaccatccggtccctttgactggccgtatccagatcatg
tcaaacggctctctgctcatccgacatgtgcttgaggacgaccgcgggtactacctctgt
caggcctctaacggagtgggctcagacatcagtaagagcatgatcctcactgtcaagatt
cccgccatgatcaccagccaccccaacaccaccatggcgaggaagggccagaccaaggag
ctgaactgcacagcgcggggtgagcagcccatcatcattcgctgggagagaggagacacc
gtcatcgacgctgaaagaaacccccgttactcgatcaccatcaacaagaagggggacgaa
gtcatctctacgcttaagctgaacccagccgagcgaggagattctgtcttcttctcctgc
cacgcaatcaactcctatggagagggtcgagggctcattcaactcactgtgcaagaacca
cctgatcctcctgagctggaagtgagggaggtgaaggaccggagcatgaacctgcgctgg
atccaaaggttcgatggaaacagcatcatcaccagctatgacatcgagtacaagaacaag
tcagactcctgggatcacatgtacacaaccagaaacatctcacccaccaacaaccaggcc
aacattgtagagctgcacccggcatgcgtttacagcatccgcatgtactcctacaacaag
ataggccgcagccttccaagtaaagagctcacaatcagcactgaggaagcaccgccggat
gggccgccgatggatgtaatcctccaaccgatgacgtctcagagcatacgggttacatgg
agggctcctaagaaggagctgcagaatggtgtcatccgaggctaccagatcggttacaga
gagaacggtccgggcagcaacggccagtacagcatagtggaaatgaaagccacaggggac
agtgaagtgtacaccttggacaacctaaagaagtttgcccagtacggggtcgtggtccag
gccttcaacagagcagggacgggcccatccagtactgagatcaacgctaccacgttggaa
gatgtgcccagtgagcctccgcagaacgtgcgagccatctctgtgacgtcggacgaggcg
gtgatcacatgggcagagcctccacggctgacgctgcacggtgtgctgaaaggctaccgg
gttgtgttttggtccctcttccccgacggaggtgggtgctgtgggggccaggcccattgg
ccaatgcagaaatggggagagatgcaaaatatcaccaccacacgtgaacaggtggagctg
cgagggctggagaagttcaccaactacagtgttcaggtgctggcctacacgcaagctgga
gacggggtccgcagcaacgtcttgtatatccaaacccgcgaggaccttcctggtccaccg
gctggcatcaaggcagttccctcctctccaagcagtgtggtcgtgtcctggttgcctcct
cacaaaccaaacggtgttattcgcaagtacaccatctactgctccagtccggggtctggg
cagccggcgcccagtgagtacgaagccaacccggagatgctattctaccgtatcacgcac
ctcacccgtggcaaacaataccacatctgggctgcagccgtgacaactgccggcagaggc
aacatcagctcaaaggtcacggtggagcccgctgggaaagtcccggctaagatcctgtcc
tttgggggcacggtgaccacaccctggatgaaggaagtgcgtctgccctgcagctcagtt
ggagagccggcccccacaattaaatggaccaaagacagtgaggactctgccatcccggtg
acggctgacagtcaaaggcagatcttatccaacggcacactggtgctacgttcagtcaaa
gcagaggattctgggtactacacctgtacagccacgaacaccctgggctttgacaccatc
atagtcaatctggtggtgcaagttccccccgatcagcctcgtctgaccgtctccactacc
tccacctcctccatcaccctggcttggatccctggggacaatgggggaagctccatcaga
ggatttgtgctgcagtattctgtggacaacacagaggaatggagggatgtgttcatcagc
tccagtgagcgctccttcaggctggacaacctgcgctgtggaacctggtacaaggtcaag
ctggccgccaagaacagcgtgggctcagggcgcatcagcgagatcattgaggctaagaca
cacggaagagagccagtgttcaataaagatcagccgctgctcactcacatcaactccact
catgcggggctcaacctgcagggctggaccagcggtggctgccccatcaccgacatgatg
ctggacttcaggcccaaaggtacctgggcctggcagagcctcaaggccaactctaccact
cagctcttcctcagtgagctgcgcgaggccacctggtatgagctcaaaatgaaggcatgc
aacagtgctgggtgtggcaaccagagctcccagtttgccaccaccgactatgacggcagt
acaatccctcccattaaatcagctcgtggagaaggggatgatgtgaagaagctgttctcc
atcggctctcccgtcatcctggttactctgggtgttgctctgctcttcattatccgcaag
aaacgcaaggagaagaggcttaaacgacttagagatgctaagagcctcgctgagatgctt
atcagcaagaacaatcgcagtattgacactccagtgaagggccctcctcaaggaccaagg
ctgcacattgacatcccacgtgttcagttactcattgaggacaaggaaggcatcaaacag
ataggggaggacaaggcagcagtgccagtgacagacacggagttcagccaatcggtgaat
ccgcagaacttctgtacaggcgtgtctctgcaccaccaagcccttatccagaactcgggg
cccttgattgacatgtcagacatccgcccaggcacaaatcccgtgtccaggaagagtata
aaatcagcccacagctccaggaacagatattccagccagtggacgctgagccgccccagt
cagagccagtcgacggcctcggcacgaactctgacctccgactggcggacgatgggctcg
catggcatcaccgccactgagagcgacagctacagcgccagcctgtcgcaagacacagat
aagggtcgaaacagcatggtgtcgacggagagcgcctcctccacttatgaggagctggcg
agggcctacgagcacgccaagctggaggagcacctgcagcacgccaagttcaccatcaca
gagtgtttcatctccgatagttcatctgaccaaatgaccacaggtaccaatgacccggca
gacagcatgacctcgctcagcacgccgtctgaaccaggcatctgccgcttcactgcctca
ccgcccaaaccgcaggactatgaccgcggtaaaaatgtggcagtgcccattccccaccgc
gctaacaaaagtgaattctgcaaccttcccctctatatgaagacagacccattcttccgc
aaacaaggggagctgcatgacccgtgcccagctgtgccaccgcgggaagcctcaatccgc
agcctgacgcagcgggcgtatcacacccagggccgtcacaagactctagaccctgccaag
cagcaggtcctgacgctgggccattctgggctgggcagcttgggtgcgagctcaggcact
gccaccttgccccagaggactctcaccatgcccagctccaacactgcagcgacagcttcc
acttccagcacgagcagcaaccccaccaacagtaacaaggtggggggctccagagactcg
ctgctagagagcagctcctctgcactggggagactgcagaaacagagtgtgggggcctac
tccaagtcatacacgctggtgtag
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