Epinephelus fuscoguttatus (brown-marbled grouper): 125897806
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Entry
125897806 CDS
T08419
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04270
Vascular smooth muscle contraction
efo04625
C-type lectin receptor signaling pathway
efo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125897806
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
125897806
09153 Circulatory system
04270 Vascular smooth muscle contraction
125897806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125897806
Membrane trafficking [BR:
efo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125897806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
125897806
NCBI-ProteinID:
XP_049447196
LinkDB
All DBs
Position
LG12:15842500..15895282
Genome browser
AA seq
1447 aa
AA seq
DB search
MSGTQSTLTDRTPNILNKDPTDKKPKNEKSSVSLKHEFDPTGLVQRCVIIQRDENGFGLT
VSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHIEVVKLIKSGSYVALTVL
GRPPGLPHISLEEDDEEENSKGEGADLSPPSSVSAPHSPALPGGEQCSLQEHSTSSLPDG
DENKTTHNQKADILQKMLTKEQQDLQAKEEEYSRNPRPKLLKEVQEAKKHILQLQEQLSK
AAAALQDGATGSRNGEAEEGDGRPTQKEQTISTRGDSANDGPLTNNNSVHSSPLTEGPGK
RETPCQSPDISRRDGLNFCSSPDTEDTPDTDSIAQCIVGSPPYLLNPQIIGAEDDYFDSQ
QEQINGLCSCFQSIDSLKTRPAHLAVFLHHVVSQFDPAPLLCYLYADMHKQTNSKESRRF
FMEFHTLFMDRTANLKVPVPEAVAAELEKRRLELIPEELCKQYTQALQDTLLPDLHKNLE
DFRQKRSMGLTLAEDELSKLDSEGGKDQQALEKECSCAEHILSKIEDILLTSQPTEEEKC
QTMQYVILTYMKHLGVKAKEPRGLEHKRARINFLPKIKKSIKPEKEGEEKVKKPRFPSIL
GPPRRLSRVDSTSVGKAVELNKQRSPKQLPQPAFGIPEQSDPSASNSGRSRGNQLSEGSD
AGTQSLPSTTTSPTLSSPIGQASDTSGHDSDSNMSPFCIQPRLGEGLQPGDHQDGVSSPT
GTQFDFSPSNLEQLQEEDQENFSRMDVQCAVSSADIQSEDDQGGEVECEENPLNWQSLVS
RGVLASLTPQEIKRQEVINELFYTERAHLRMLKVMDCVFYQRLNRDGILPPEDIKHIFIN
LEEIIQLHVSVTEQMTAIRKRSETSVIGEIADDLLAWFSGEEEEKIKRAVGTFCSNQPSA
LELIKSKKKKDQRFTLFMQEAESNRLCRRLQLKDIIPVEMQRVTKYPLLLENIAKYTEDG
EEREKVKRAGECCKKILNHVNQAVREAENKQRLEDYQRRLDLSSLKQSENPMILELRNLD
LTKRKMVHEGPLSWKVNKDKTIELYTILLEDILVLLQKQDERLVLKFHGKNPASATDTKH
IFSPIIKLNTVLVRPVATDNKSFFVLSMSENGAQIYELMAQTVSDQRAWQCLITQCADAM
KAKPHNRDRPPVQSDAERDAIEIIKSGMPKASKDPDGTSSGSIHSSDKDAASSPDIQVPQ
SINPFDGMKSEDEEEELVVADRQEEDEDDEEVDEAELEAFLDGQLADGLPFLQEESRQGI
AIENQEHEAFGVPSSKGEEALRTLAMLKQALFNHMISRETEEEKEETQESKQSASVPASP
EGPPESRASAGSQKENPQLPSGHTELSETPERNGGFVVLDFGGEESSTDDDGGVGGDVGI
DMSKLLSSSSQAGGSSGPNLSRQLMTHLRLLQADLQYLKEVEMKYNELRQTNSDMATDSD
DNNDGIQ
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtcaactctcactgacaggaccccaaacattctcaacaaagacccc
acagacaagaaacccaagaatgagaaatcctccgtctccctcaaacatgagtttgacccc
acaggtcttgtccagcggtgtgtgataatccagagggatgagaatggcttcgggctgact
gtaagtggagacaaccctgtgtttgtgcagctggtaaaagaagatggagctgcaatgcga
gctggtgttcagacaggagacaggatcattaaggttaatgggacgttggtcacacattca
aaccacatagaggttgtgaagctgataaaatcgggctcctatgtagccctgacagtgctg
gggaggcctccagggcttcctcacatctccctggaggaggatgacgaggaggaaaacagc
aagggggaaggggcagacctcagcccaccctcatctgtctcagcgccccactcacctgct
ctgccaggtggggagcagtgcagcctccaggagcacagcacctcctctctgcctgatggg
gatgagaacaaaaccacgcacaaccagaaggccgacatcctgcaaaagatgctaactaag
gagcaacaggacctacaggcaaaggaggaggagtacagcagaaaccctcggcctaaacta
ctgaaggaggtccaagaggccaagaagcacattttacagctgcaggagcagctcagcaaa
gcagcagcagcactacaggatggagccacagggtccaggaatggtgaggctgaggagggg
gatggcaggcccactcagaaagaacagaccatatccacacgtggtgacagtgctaacgat
gggcctttgaccaacaataactctgtgcacagcagcccccttacagagggtcctggcaaa
agagagacgccctgtcagagcccggacatcagccgcagagacggcctcaacttctgctca
tcgcctgacactgaggacacccctgacacagactccattgctcagtgcattgtgggtagc
cctccctacctcctcaacccccagatcatcggtgcagaagatgactactttgactctcaa
caagagcagattaatggactgtgcagctgtttccaaagtatagactcgctgaagactcgg
ccagctcaccttgcagtcttcctccatcatgttgtctcgcagtttgaccctgcgcctttg
ctctgttatctctacgctgacatgcacaagcaaaccaactccaaagagagccgacgcttc
ttcatggaatttcacacactctttatggatcgaacagcgaatcttaaagtaccagtgcca
gaggcagttgcagctgaattggagaaacgaaggctggagttaatcccggaggagctctgc
aaacagtacacccaggcgttacaggacacactcctaccagaccttcacaagaacctggag
gacttcagacagaagcgcagcatgggtctgactctggccgaagacgagctgtccaagctg
gactcagagggaggaaaagaccagcaggccctggagaaggaatgctcctgtgctgaacac
atcctctccaagatagaggatatcctgttgacgtcacagcccacagaagaggagaagtgc
caaacaatgcagtatgtgattctcacctatatgaagcaccttggggtgaaagcgaaggag
cctcgtggactcgaacataaacgagcacgcatcaactttctgcccaagattaagaagagt
atcaagcctgagaaggagggcgaggagaaggtgaaaaagcctcggttccccagcatcctc
ggcccacctcggcgtctgagcagagtggactccacttcagtcggtaaggccgtggagctg
aacaagcagcgctcaccaaagcagctccctcagccagccttcggcatccctgagcagtcc
gacccctctgcctcaaattctgggcggagccgtggaaatcagctcagtgagggatcagac
gctggcacacagtctttgccctccaccaccacctcccccacactcagctcacccattggt
caggcctcagataccagtggacacgactcagactccaatatgtctccattctgcatccaa
cccagactgggcgagggtctgcagcctggcgaccaccaggacggcgtctccagtccaact
ggcactcagtttgacttcagcccctccaacctggagcaattacaggaggaagaccaggaa
aattttagtaggatggatgtgcagtgtgcagtgagttcagccgacatccagagtgaagat
gaccagggaggtgaggtggagtgtgaagagaaccctctgaactggcagagtctggtcagc
cgaggcgtcctggcgagtttaaccccacaggagatcaaacggcaggaagtcatcaatgag
ctcttttacactgagcgcgcccacctgcggatgctgaaggtgatggactgtgttttctac
cagaggttgaacagagacggtatcctccccccagaggacattaaacacatctttattaac
ctggaggaaatcattcagctgcatgtttctgtaacagagcaaatgacagcaatcaggaag
aggagtgagacatcggtgatcggtgagatcgcagatgacctcctggcgtggttcagcggc
gaggaagaggagaagatcaaaagagcagtgggaactttctgtagcaaccagccgtctgca
ctggagctcatcaagagcaagaagaagaaagaccagcggttcactttattcatgcaggaa
gctgagagcaaccgtctgtgtcgcaggctgcagcttaaagacatcattcctgtggagatg
cagagagtcaccaagtatccactcctgctggagaatattgccaagtacacagaagatggc
gaggagagggaaaaggtgaagagggctggagaatgttgcaaaaagatcctcaaccacgtc
aaccaggctgtcagagaggctgagaacaaacagaggctggaggattatcagagaaggtta
gacctgtcatcactcaaacagagtgaaaaccccatgatcttggagctgaggaatctggac
ctgaccaagaggaagatggtgcacgagggacctctctcctggaaagtcaataaagacaag
acaattgagctgtacacaatcctcctggaggacatcctggtgttactgcagaaacaggac
gagcgtctggtcctcaaattccacggcaagaatccggccagtgccaccgacaccaaacac
atcttcagccccatcatcaaactcaacactgtcctggttcgtccagtggcaactgacaac
aagtctttcttcgtgctgtccatgtctgaaaacggagctcagatctacgagctgatggct
cagacggtgtccgatcagagagcgtggcagtgtctgatcacacagtgtgctgacgccatg
aaggccaaacctcacaacagagacagacctccagttcagtctgatgctgagcgagacgct
attgagatcatcaaaagtgggatgcccaaggcgagcaaagatcctgacggcacatcaagt
ggaagcatccattcttcagataaagacgccgcctcttctccagacattcaagtgccacag
agtatcaacccgtttgatgggatgaaatcggaggatgaggaagaggagctggtcgtggca
gaccgacaggaggaagacgaggatgatgaagaggtggatgaagcagaattagaggctttc
ctggacgggcagctggcagatggactgcccttcctacaggaagagtcacgtcagggcatc
gctattgaaaaccaagagcatgaagcgtttggggtaccctcctctaaaggggaagaagct
ctcaggacgttggcgatgctgaagcaggctcttttcaaccacatgataagcagagagacc
gaggaggagaaagaggagacacaggagagcaagcagagtgcctctgtgcctgcgagcccc
gaggggccccctgagagccgagcgtctgcaggttcacagaaagaaaaccctcagctcccg
tcaggacacacagagctgtctgagacgcctgaacgtaatggtgggtttgtggttctggat
tttggtggagaggagagcagcactgatgatgatggaggagtcggaggtgatgtggggatc
gacatgagcaagctactgtcctcctcctcgcaggcagggggcagcagtggccccaacctc
agcaggcagctcatgacccacctacgcctcctgcaggccgacctgcagtatctgaaggag
gtggagatgaagtacaacgagctgcgacagacaaacagtgacatggcgactgactctgac
gacaacaacgacgggattcagtga
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