Epinephelus fuscoguttatus (brown-marbled grouper): 125897886
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Entry
125897886 CDS
T08419
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125897886 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125897886 (nup98)
03036 Chromosome and associated proteins [BR:
efo03036
]
125897886 (nup98)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125897886 (nup98)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125897886 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
125897886
NCBI-ProteinID:
XP_049447304
LinkDB
All DBs
Position
LG12:42339362..42382129
Genome browser
AA seq
1841 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTSSTFGQQNTGFGTAGAFGTSAFGTTANTGGLFGATQNKPGG
LFGSSTFSQPATSSTSTGFGFGAATGTSTSLFGNTGTGTSGGLFSQQQNNAFGANKPTSF
GSFGTSTSSGGLFGSTNTTSNPFGGGTSLFGGSGFSAAQQQPGTTVKFNPPTGSDTMVKA
GVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMAAGTGGLFGAPTATSST
ATGLFGSTAPNTNFSFGQNKSTFGAAPAAGGFGATTGGLFGQQAPQQASSLFKPFGQTTT
TQSTGFSFGNTNTIGQANTSSIGLFGNTAASQSGGLFGAAQTSAATGFGTGTGLFGQTNA
GFGNVGTQQSLFGNKTAGFGTTTTSAPSFGTGTGLFGNKPALTLGTGTNTSSFGFGANPA
AGSLFGNKPATGGLGTALGTSFGAAVGTGQTSLFGNNQNKLGTTLGTMGTFGTTGFSSGT
SSLGFGAQQQPVALTDPNGAAAQQAMLQQQLSVLAYSPYGDSPLFRNPLSDPKKKEERLK
PTNPTAQKALTTPTHYKLTPRPATRVRPKALTSSGASKSQLFDGLDDDEPSLTNGAFIPR
KSIKKLVLKNLNSSQYSSPVTKETDDLASPSEYPQNGHSHMEEEEEAAPGPSSRPDDDPE
VTQFYVNPIAKPIPQGRAQTSLQDTISDLNMHKAARNGLELSSEDVSASLGEESLQEDRE
EEQQESQQSPHPAGIVLNRVGYYTIPSMDDLSEMVDENGECVVENFTVGRKGYGSIFFPG
EVNVTGLNLDEIVHFRRKEVIVYPDDKNKPAEGEGLNRRAEVTLDGVWPNDKTTCTQIRS
PERLLDMNYEGRLEKASRRQGARFLEYRPETGSWVFEVAHFSKYGLQDEDEDEDVPPKAD
PKKLKTMMSLPPSKLQQLLPPSQQQVAPQAQSTVVVDLPGSVAELDSDMADITQSFPTES
MLGGEEDGDLPATAEMDTTTSGKLTGLISSEHDGISASSHMASSLGINPHTLQIMKASLF
AEDEEEGDMFQDQGAMKDVWSPRLVLPGAQTRPSVGGLLQARFTSGLISQLSDSPRPPPL
LPPPLSRGSPAATEPSRPSHWAGPGPSSFLLPPRAPEPSVRTVGVRRLGGPVPLKESVTL
GKGSLLMDAGLYAGRSFRVGWGPGWTLAHCGHRLSSPPKQLDQQELTKTDFSFLPKLARS
KPLTESPYKVVMEQLECLQPPAVKSSQQEDEESQAVLQRPLDICLKHSTVDITEASACPL
VRPQPGVAALHEYAEWIIELSDKQGDADPLLGYWAEVWTLCEALWGRLGPADQELDVQAP
GEYEQQLERRRSFSAWLSRGATSRVEEEVALAGKGRHVEAIFSYLTGNRISEACRLAQKE
GDHRLSLLVSQAMGSQYCRDLLALQLADWNRMQTDSYLPEERLRIFTLLAGKPVWQSSDS
VVNVCSELDWKRCVAVHLWFMLPPTASVADALARYEAAFQGSCEGGKYACAPLPPYLEAE
QPDLDEEEEEEEESKRSLYDLCFHLLKLYSDRHYSLQQLLDPLTVTWERLDYRLSWHLWG
VLQALHYSHLSISRQGLLHASYAAQLESAGLWHMAVFILLHIPDHTQRERAVREMLTLHC
PLQETDESVRRERFLTERLLIPEQWIHEAKATRARRDADRHQEALHLYRAGYWSQCHRLL
IQHLASDCIINDNHDYLLEFLEGLAVPEHSATIQDWDTAGGVYLDYIRVIKTLQDIQQME
NAGYELERLYTHVTSLCSRIELLPCSTARDRLAQSEMAKRVANILRVVLSLQQGDTASDS
LSIPLIQLAPHITRLPMPEDYMLEELRGLTQSYLRQLIVSQ
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcatttggtactcccttcggcggagggacgggggggttcggcacctca
tcgacctttggacagcaaaacacgggcttcgggacagcgggagcctttgggacgtctgcg
tttgggactactgccaacactggagggctgtttggtgccacgcagaacaaacctggcggt
ttgtttggctccagtacgttcagccagccggccacttcctccaccagcactggcttcggg
ttcggtgcagcgactggcacttccaccagcctgttcggcaacacaggaacgggcaccagt
ggcggactcttctcccagcagcagaacaatgccttcggtgccaacaaacccacctcattt
ggaagcttcgggacgagcaccagcagcggcgggctgtttgggtcgaccaacaccacctcc
aaccctttcgggggaggcacctctctgtttggaggctcggggttcagcgccgcacagcag
cagccaggaaccactgtaaaattcaatcctccgacaggaagtgacacaatggtgaaagca
ggcgtgaccacaagcatcaacaccaaacaccagtgcatcacagccatgaaggagtatgag
aacaaatcactggaggagttgaggctggaggactaccaggcgggcaggaagggcccgacc
aacccgatggctgcggggaccggcggtctgttcggtgcgcccacggcaacgtccagcact
gccactggcctgtttggctccaccgcccccaacaccaacttctcctttgggcagaacaag
agcacgtttggagctgcaccagcggccggcggttttggtgccaccacaggcggtctgttc
ggtcagcaggcgccgcaacaagccagcagcctcttcaagccgtttggtcagaccacgacc
acgcagagcaccggcttctccttcggaaacaccaacaccataggacaggccaacaccagc
agcattggtttgtttggaaacaccgcagcatctcagtcgggtgggttgtttggtgccgct
cagacgagcgccgccacaggctttgggacgggcacggggctgttcggccaaaccaacgct
ggatttggaaacgtcggcacacagcagagtttatttggtaataagacggcagggtttggc
accaccaccaccagcgctccatccttcggcactggcaccggcctgtttgggaacaagccc
gccctcacactggggactggaacaaacacgtccagcttcggctttggtgcaaacccagcc
gcaggaagtctctttgggaacaagccggccactggaggactggggacggcactgggaacc
agcttcggagcagcagtgggtacaggacagacgtctctgtttgggaataaccagaacaaa
ctgggtaccacactgggaacgatgggaacgttcggaacgactggattcagcagtggaacc
agcagcctgggcttcggagcccaacagcaaccagttgcgctcacagatccgaatggtgcg
gccgcccagcaggccatgctgcagcagcagctcagcgttctggcttactctccgtatgga
gactcaccgctcttcagaaacccgctttcagacccaaagaagaaagaggagcgtctgaaa
ccaaccaatcccacggctcagaaggccctgaccacgcccacccactacaagctcaccccc
cgtccagccaccagagtccgccccaaagcactgacatcatcaggggcctccaagtcgcag
ctctttgacggcctggacgacgatgaaccctcgctcaccaacggagccttcatacccagg
aagagcattaagaagctggtgctgaagaacctgaacagcagtcagtacagcagtccggtc
accaaggagacggacgacctggcgtcaccctcagagtacccgcagaatggacacagtcac
atggaggaggaggaggaggcggcaccgggccccagcagccggcccgacgacgaccccgaa
gtcacccagttctacgtcaaccccatcgccaagcccattccgcagggccgtgcacagacc
agcctgcaggacaccatcagcgacctcaacatgcacaaagcggcacggaacggactggag
ctgagcagcgaggacgtgtcagcgtctttgggggaggagtctctgcaggaggacagagag
gaggagcagcaggagtcccagcagtctcctcaccctgcaggcatcgttctgaaccgtgtt
ggttactacaccatcccctccatggacgatctgtctgagatggtggacgagaacggagag
tgcgtggtggaaaacttcacagtcggcaggaaaggctacggctccatcttcttccccggc
gaggtgaacgtaacggggctgaacctcgatgagatagtccacttcagacgcaaagaggtc
atcgtgtacccagacgacaagaacaagcctgcggagggggaggggcttaacaggcgagcg
gaggtgacgctggatggcgtctggccaaacgacaagacgacctgcactcagatcaggagc
ccagagcgtctgttggacatgaactacgagggtcggctggagaaagcatcccgcagacag
ggagctcgtttcctggagtacagaccggagactggctcctgggtgtttgaggtggcccat
ttctccaaatacggcctgcaggacgaggatgaggacgaggacgtcccgcccaaagccgac
cccaagaagctgaagacgatgatgtcacttcctccctccaaactgcagcagctgcttcct
ccctcccagcagcaggtggcgcctcaggctcagtccactgttgtcgtggaccttccgggc
agcgtggcggagttggacagcgacatggccgacatcacccagagcttcccaacagagagc
atgctgggaggagaggaggatggcgacctgccggcgacagctgagatggacactacaacg
agcgggaagctcacaggtttgatctcctcagagcacgacggcatctctgcgtccagccac
atggcgtcctcactggggatcaatccacacaccctccagatcatgaaggcgtcgctgttt
gctgaggatgaagaggaaggcgacatgttccaggatcagggagcgatgaaggacgtctgg
tcccctcgtctcgtcctgccaggagctcagaccagaccctccgtgggcggtctccttcag
gctcgtttcacctccggcctcatctctcagctctcagactctcctcgtcctcctcctctt
cttcctcctcctctgtcccggggctctccagcagccaccgaaccctcccgcccctcgcac
tgggccggccctgggccctcgtccttcctgctgcccccccgagctccagaaccttcagtc
aggacggtcggcgtccggcggctgggcggccccgtccccctcaaagagtcggtcactctt
ggaaaggggagtttgttgatggacgccggcctgtatgcgggtcgctccttcagggtcggg
tggggtcccggctggacgctggcgcactgcggccaccggctgagctcaccgcccaaacag
ctcgaccaacaagaactgaccaaaacagacttcagcttcctgcccaaactggccaggagc
aagccactgacagaaagtccctataaagtggtgatggagcagctggagtgtctgcagcct
ccagctgtgaagagcagccagcaggaggacgaggagagccaggcggtgctgcagcgcccc
ctggacatctgtctgaagcacagcaccgtcgacatcactgaagcttctgcctgccctctg
gtgcgaccgcagcccggcgtggcggcgctgcacgaatacgcagagtggatcattgaactg
agcgacaagcagggagacgctgatcctctgcttggttactgggccgaggtctggaccctg
tgtgaggccttgtggggccggctgggccctgctgatcaggagttggatgttcaggcgccc
ggcgagtacgagcagcagctggagaggaggcggagcttttcggcctggctgtcccgcggc
gccacctccagggtggaggaggaggtggcgctggcggggaagggtcgccacgtggaggcc
atcttcagctacctgacgggaaaccgcatcagtgaggcgtgtcgactggcacagaaggaa
ggagaccaccgtctgtccctgctggtgtctcaggccatgggctctcagtactgccgggac
ctgctggcccttcagctcgccgactggaaccgcatgcagacagactcctacctgccagag
gagcggcttcgcatcttcactctgctcgcggggaaaccagtgtggcagtcgtcagactct
gtggtgaacgtttgctctgagttggactggaagcgctgcgtggccgtccacctctggttc
atgttgcctccgactgcctctgtggccgacgccctcgccagatatgaagctgccttccag
ggctcctgtgaggggggaaagtacgcctgcgcccccctgcctccgtacctggaggcggag
cagccggacctggatgaggaggaggaggaggaggaggaatccaagcggtcgctgtacgac
ctctgcttccacctgctcaaactctatagcgacagacactacagcctgcagcagctgttg
gaccctctgaccgtcacctgggagcgtctggattaccgtctgagctggcacctgtggggc
gtcctgcaggcgctgcactacagccacctcagcatctcgcgccagggactccttcacgcc
agctacgccgcacagctggagagcgccggcctctggcacatggccgtcttcatccttctg
cacatccccgaccacactcagcgggagcgagcggtgagggagatgctgaccctccactgc
cccctgcaggagacggacgagtcggtccgcagggagcgcttcctgaccgagaggctgctg
atcccagaacagtggatccacgaggccaaggccacacgagcccgccgcgatgccgaccga
caccaggaggccctgcacctataccgggctggatactggagccagtgtcatcgtctgctc
atccagcacctggcctcagactgcatcatcaacgacaaccatgactacctgctggagttc
ctggaggggctggcggtccctgaacacagcgccaccatccaggactgggacactgcaggg
ggcgtctacctggactacatccgagtcattaagactctgcaggacatacagcagatggaa
aacgccggttacgagttggagcgtctctacacacacgtgacgtctttgtgcagcaggatt
gagctcctcccctgcagcacggccagagaccgccttgcccaatcagaaatggcgaagcgc
gtggccaacatcctgcgggtggtgctgagcctgcagcagggtgacacagcctctgactcc
ctcagcatcccgctcatccagctggcgccgcacatcacccgcctgccgatgccggaggac
tacatgctggaggagctgcgaggcctcacgcagtcgtatctgcgacagctcatcgtcagc
caatga
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