Epinephelus fuscoguttatus (brown-marbled grouper): 125898101
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Entry
125898101 CDS
T08419
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
efo03009
]
125898101 (ddx52)
Enzymes [BR:
efo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125898101 (ddx52)
Ribosome biogenesis [BR:
efo03009
]
Eukaryotic type
90S particles
Helicases
125898101 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Ribosomal_S7e
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
125898101
NCBI-ProteinID:
XP_049447715
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All DBs
Position
LG12:complement(26956155..26962657)
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AA seq
697 aa
AA seq
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MIRWLISDAWVLTDHAAAGMDAFELFRKLGAGAKFDLKRFGQDAARFKVARSHGGEASTD
ALSAIDYFGTGANNGSQSSSQEDEEDDEGEDYEVGSDSGDSGAGGKRKQRDEERDVKRKK
KKMKSNQVEADGGTLKDTEGNGITWTSSLDRKIQNLSGDGKEKSSLKRLKHLHQEKVNRI
RSQHRINVHGCDVPDPVCTFEELQSEYRLNPRVLQNLKDAGLNSPTPIQMQAIPLMMHSR
ELLACAPTGSGKTLAFCLPLLAHLQQPANLGFRAVVISPTRELANQTYRELLRLSEGVGF
RVHIIDKASLAAKKYGPQSNKKYDILVSTPNRLIFLLKQDPPGLDLSSVEWLVVDESDKL
FEAGKTGFREQLATIFLACSGSKVRRAFFSATCTPDVEQWCRLNLDNLVSVNIGHRNTAV
ETVEQELLFVGTENGKLVAMRDIIKKGFLPPMLVFVQSIDRARELFHELVYEGINVDVIH
ADRTQQQRDNVVNSFRSGKIWVLICTALLARGIDFKGVNLVLNYDFPTSAVEYIHRIGRT
GRAGHQGKAITFFTENDKPLLRSIANVIKQAGCPVPDYMIGFKKIHSKVKRRLEKKPPKR
STICTTPRFLMKKKGNAPNKGQKEKKQKGEGGTQTAVQQHKKEKKPKGQGLKNKNKKQTE
GGGEKHKKTSQKMGSDSSGAKLKKKKGKKNKPQDKQR
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtggttgattagtgatgcctgggtgctgacagaccacgctgctgcaggaatg
gacgccttcgagttgtttcggaaactcggagctggagctaaatttgacctgaagaggttt
ggtcaagacgctgctcggtttaaggttgccaggtctcacggtggggaagcgtccacagat
gctctctctgcgatcgattattttggcacaggagcaaataatggatcccagagcagttcg
caggaggacgaggaggatgatgaaggagaggattatgaggtgggaagtgacagtggagat
tcaggtgcaggaggcaaaaggaagcagagggatgaagagagggacgtgaagagaaaaaag
aagaagatgaaaagcaaccaggtggaagctgatggcggaacgttgaaagacacggaggga
aatggcatcacctggacctcctcgctggacagaaagatccaaaacctgtcaggtgacggg
aaggagaaatcctcgctgaagaggctgaagcatcttcaccaggaaaaggtgaatcgtatt
cgctctcaacaccgtataaacgtacacggctgcgacgtgcctgaccctgtgtgcacgttt
gaagagctacagtccgaatatcgtctaaacccgcgtgtccttcagaacctcaaagatgca
gggctgaactcccctacacccatacagatgcaggcgataccgctcatgatgcatagtcgg
gagctgctggcctgcgctcccacgggatcaggaaagactttggctttttgtcttccgctg
ctcgcccacctgcagcaaccggccaacctgggcttcagagctgtggtcatctctccgacc
agagaactggccaaccagacctacagagagctgctccgcctgtcagagggagtgggattt
agagttcacatcatagacaaagcctctctggcagccaagaaatatggaccacagtcaaac
aaaaaatatgatatactcgtcagtactccaaacagactcatcttccttctcaagcaggat
cctccaggtctcgacctcagcagcgtggagtggctggttgttgacgagtccgataagctg
ttcgaggccggcaagacgggcttcagggagcagctcgccacaatttttctggcctgctcc
ggttcaaaagtgcgcagggctttcttcagcgccacctgcacgccagatgtagagcagtgg
tgccgtctgaacctcgataacctggtgtctgtcaacattggacacagaaacacggcagtt
gagacggtggaacaggagctgctgtttgttgggacggagaacggcaaactggtggccatg
agggacatcatcaaaaaaggtttccttcctcccatgctggtgtttgtgcagtctatagac
cgagcacgggagcttttccatgagttggtatatgaaggcatcaatgtggatgtgatccat
gccgaccgcacacagcagcagagggacaacgtggtgaacagttttcgctccggtaagatt
tgggtgttgatctgcacggctctgctcgccagaggaatcgacttcaaaggagtcaacctc
gtgctgaactacgacttccccaccagcgctgtggagtacatccaccggattggtcggaca
ggtagagctggacatcaggggaaggccatcaccttcttcacagaaaatgataagcccctg
ctgcgcagcatcgccaatgtcataaaacaagctggctgccctgtacccgactacatgatt
ggcttcaagaagatacacagcaaagtgaagcggagacttgagaagaaacctcccaagaga
agtaccatttgcacgactcctcgcttcttaatgaagaagaaaggcaacgcaccaaataaa
ggacagaaagaaaagaagcagaaaggagaaggtggaactcaaacagcagtgcagcagcat
aaaaaggaaaagaagcccaaaggacaggggctgaagaacaaaaataaaaaacagacagaa
gggggaggagaaaagcacaagaagacatctcagaagatggggtcagattcttctggagcc
aaattaaaaaaaaaaaaggggaagaaaaataagccacaagacaaacaaagatga
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