Epinephelus fuscoguttatus (brown-marbled grouper): 125898221
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Entry
125898221 CDS
T08419
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125898221 (zc3h12b)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
125898221 (zc3h12b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
125898221
NCBI-ProteinID:
XP_049447919
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Position
LG12:10753465..10773125
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AA seq
845 aa
AA seq
DB search
MTVWSMVEKLKMEKHPCREENIDSSEAQHASDDSEDGSSSESEPEDQQHQRVQVNRCKKR
EPLAVAKPHRQLCRSPCLDRPSFSQSSTAQDFREDDTSVAPGIKPASDKEYQTKMEFALK
LGYSGEQVETVLNKLGAAALINDILAELVRLGNKVEPETQPCSSTATSVPRPPCAKETVS
PEVSVEEESVDSFDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKGHKDITVFV
PAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLSYDSDGI
IVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVP
EHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKTMSEGALAKCGT
GPATVKGDSNSEVKRVAPKRQSDPSIRSVACEPPEALSVVRKSETNSVPSLVSALSVPTM
QPAKSHAAGALNTRSASSPVPGSLQFSHSSLEHMSSVQYPPILVTNSHGASITYSEQFPK
YDSVSDHGYYSLHSDFSTMSMSSMHNVDSFCSMEHEHGVYQRNPSHCPESCLSHSNSDSF
SSYGDLYPSSVDSSLEESMKGQQQQSPAQGRMQAFSHGFRHEALTRVQSYGPEEPKQGPR
KQSGSHLAPHIQHVAVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSISDSRLYDS
NPMRQRRPPLCREQHASWDPLPCGNESFGYHSYPLSNSLMPCCERVMVRSMPDKMEQIWN
SPWEMPSAAEHQERYVIPDHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQLAAVIVTK
LRSCH
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgacagtatggtcgatggtggagaagctcaaaatggaaaaacacccatgcagggaggag
aacattgactcaagtgaggcccagcatgccagtgacgattccgaggatggaagcagctca
gaaagcgaaccagaagatcagcagcaccagagggttcaggtgaacaggtgtaagaagagg
gagcccttggctgttgcaaaaccgcaccgacagctctgtcgctctccgtgcctcgaccgg
cccagtttttcccagagtagcactgcgcaagattttcgtgaggatgacaccagcgtggca
ccagggatcaagcctgccagtgacaaagagtaccagactaagatggaatttgcattaaag
ctgggctattcgggagagcaggtggagacggtgctcaacaagctgggggctgctgcactt
attaacgacatcctcgctgagttagtaaggcttggaaacaaagtagagcctgaaactcaa
ccttgcagcagtacggccacgtcagtaccacgccccccctgtgctaaggagactgttagt
ccagaggtgtcagtggaagaggagtctgtggatagctttgataacctcaggcccatcgtc
attgatggctcaaatgtggcaatgagccatggaaacaaagaggttttctcttgccgtggt
atccaacttgctgttgaatggttcttagagaaaggacacaaagacatcactgtgttcgtc
ccagcctggagaaaggaacagtcaaggccagacgccctcatcacagatcaagaaatacta
cgcaagctggaaaaagagaagatcttggttttcaccccatctcggagagttcaaggaagg
agagtggtgtgctacgatgatcgcttcatagtgaagctgtcttatgattctgatggaatt
attgtgtcgaatgacaactacagggacttgcaaaatgaaaagccagagtggaagaagttc
atagaagagcgtctcctgatgtactcgtttgtcaatgacaagtttatgccgcctgatgat
ccactgggaagacatggcccaagcttagaaaactttcttcgcaagcgtcctgttgttcca
gagcacaaaaaacaaccttgcccctatgggaaaaagtgcacatatggacataagtgcaag
tactatcatccagagcgtgtgaaccagccacagcggtcagtggctgatgaactacgggct
tttgccaaattgtctgcagtgaagacgatgagtgagggggctttagctaaatgtggaact
ggtccagcaactgtaaagggggacagcaactctgaggtcaaacgtgtggcacccaaacgt
cagtctgaccccagtattcgctcagtggcctgtgaacctccagaggcactgtcagttgtt
aggaagtctgagacaaattcagtgccttccctcgtgtctgctctcagtgtgcccaccatg
cagcctgccaagagccacgcagctggggccttgaacacacgatcagccagcagcccagtg
ccaggttctttgcagttctcacacagttccctggagcacatgtctagtgtacagtaccct
cctattttagttaccaatagtcatggcgcctctattacatacagtgaacagttcccaaag
tatgactcagttagcgaccatggatattattcactgcacagtgatttttcaactatgagc
atgagcagcatgcataatgtcgacagtttctgtagcatggagcacgagcatggtgtgtat
cagagaaatcccagccactgccctgaatcctgcctcagccattcgaatagtgactccttc
tcctcttatggggatctgtacccaagctctgtggacagtagcttagaggagagcatgaag
gggcagcagcagcagtctccggcacagggaaggatgcaagctttctcccatgggtttcgt
catgaagcactgaccagggtacagagttatggacctgaggaacccaagcagggcccccgt
aagcagtctggatctcacctagcaccacatatccagcatgttgcagtgggagccaggtcc
agctgtcctggagactatcccctcactcagaatgtcctcccacctttgtcctcacagccc
acacggtctcttggcatgactcgtatggatagcatatcagattcaaggctatatgatagc
aacccaatgagacagaggcgacctccactgtgccgcgagcagcatgcaagctgggaccct
ctgccttgtggtaacgagtcctttggatatcattcatatcctttgagtaacagcctgatg
ccgtgttgtgagcgggtgatggtccgcagcatgccagataaaatggaacaaatctggaac
tcaccatgggagatgccatctgcagctgaacaccaagagcggtatgtcatcccagaccac
cagtatcaaacatatcggaacctttgtaacatctttcctgcttacgtagtccactcagta
atggagaagaaccctcatttgacagatccacaacagcttgccgccgtcattgttacaaaa
ctgaggtcatgccattaa
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