Epinephelus fuscoguttatus (brown-marbled grouper): 125898342
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Entry
125898342 CDS
T08419
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125898342 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125898342 (exosc8)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125898342 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
NYN_YacP
Motif
Other DBs
NCBI-GeneID:
125898342
NCBI-ProteinID:
XP_049448072
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All DBs
Position
LG12:complement(29229572..29233856)
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AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRPDGRELLEFRTTTLNIGSISTADGSALVKVGNTTVIC
GIKAELANPLVETPGKGYIVPNLDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSEVIQ
TEDLCIDRGKLCWVLYCDMMCLDHDGNVLDACIIALLAALKNTQLPEVTISTETGAPQVN
LEKRRGLHIHKHPVGASFCVFDDSILIIDPTAEEESLSTAHLTVVTDEEARLCVVHKPGG
TSLSAEKLQECISRATARQREIQKLIDKVIQSVKTAQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaagactgcagagcctctggagtaccacaggagcttcctgaaagaa
aactgccgacctgatggacgggagctgttagaattcagaaccacaacactaaacataggg
tccatatccacagcagatggctcagccctggtgaaggtcgggaacaccacagtcatctgt
ggcatcaaggcggagcttgcaaaccctttagtggagacacctggtaaaggatacatagtg
cccaatttggacctgccgccgctgtgttcctctcggtttcggccgggtccaccaggagag
caggcgcaggctgccagccagttcatcgctgatgtaatcgaaagctctgaggtgatacaa
acagaggacttgtgcatcgacaggggaaagctctgctgggtgctctactgtgacatgatg
tgtctcgaccacgatgggaacgtgttggatgcttgtatcattgccctgctggctgccctc
aagaacacacaactcccagaggtcaccatcagcacagagaccggcgcaccacaagtaaat
ttagaaaagagacgtgggctgcatattcacaaacatccagttggcgcctctttttgtgtc
ttcgatgattccatactgatcatagaccccacagctgaggaggagagtctgtcgaccgct
cacctcactgtggtgacagatgaagaggctcgactctgcgttgtacacaaaccaggtggg
acgtcactgtcggcagagaagctgcaggagtgtatcagcagagcaacagcacgacaaaga
gagatccagaaactcatcgataaagtcatacaaagtgttaagacagcgcaataa
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