Epinephelus fuscoguttatus (brown-marbled grouper): 125898954
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Entry
125898954 CDS
T08419
Symbol
ncam1a
Name
(RefSeq) neural cell adhesion molecule 1a isoform X1
KO
K06491
neural cell adhesion molecule
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
efo04514
Cell adhesion molecule (CAM) interaction
efo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
125898954 (ncam1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125898954 (ncam1a)
04517 IgSF CAM signaling
125898954 (ncam1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125898954 (ncam1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efo04515
]
125898954 (ncam1a)
04090 CD molecules [BR:
efo04090
]
125898954 (ncam1a)
00536 Glycosaminoglycan binding proteins [BR:
efo00536
]
125898954 (ncam1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
efo00537
]
125898954 (ncam1a)
04091 Lectins [BR:
efo04091
]
125898954 (ncam1a)
Membrane trafficking [BR:
efo04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
125898954 (ncam1a)
Cell adhesion molecules [BR:
efo04515
]
Immunoglobulin superfamily
NCAM1/2
125898954 (ncam1a)
CD molecules [BR:
efo04090
]
Proteins
125898954 (ncam1a)
Glycosaminoglycan binding proteins [BR:
efo00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
125898954 (ncam1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
efo00537
]
Others
125898954 (ncam1a)
Lectins [BR:
efo04091
]
I-type lectins (Siglecs)
125898954 (ncam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
V-set
C2-set_2
Pur_ac_phosph_N
V-set_CD47
Ig_PDGFR_d4
Fn3_ROS1
Ig_ANOS1
fn3_2
Motif
Other DBs
NCBI-GeneID:
125898954
NCBI-ProteinID:
XP_049449000
LinkDB
All DBs
Position
LG12:complement(13308346..13730969)
Genome browser
AA seq
1006 aa
AA seq
DB search
MLQIGDLIWGLLFIGCAAAIQVQITPTQGEISVGESKFFLCEVLGDVKDIDWYAPSGEKI
LPNRPDIFVSRGDETMSTLTIYHANVDSAGIYKCVAKNGDKEAQATVQVKIFQKITFESA
PTPQEFNEGDDADIVCNVVSSPPPTIIWKHKGSRIQVAKDVRFKIMDNGHLQIRGIKKTD
EGMYNCEARVMARGEIDFRMIRVVVNVLPTIRARQSEVNATADIGSSALLACDADGFPEP
TVTWAHNNIVLETGDKYSLNEDGSELVIKDVKKVDEGDYTCIAKNKAGEKAEEVSLNVFV
QPKITYLNNQTASEFDDQVTLTCEASGDPTPTISWSFDNRVLTEGEQSLDRNIVVRSHAR
VSSLTLKNVLFTYAGQYLCTASNSIGQDDQHMYLEVRYAPKILGRVTVYTWEGNPANISC
EVEAHPGASVVWFRDGFQLPSANTTNMKIYNTPTISYLEVTPDSQNDFGSYNCTATNVMG
SESKEFLLIQADVPSSPEITLVEPFSSTAVVKFEEPDSMGGVPIIKYRVEWRLPGQDWIG
SEHNAKDDMTTITIVGLKPETTYEVKMSAINGKGEGESSPARTFKTEPVLSSEVPPPIAA
TSMARREPSAPKLEVKMQDRGNTLKVNWIKQDDGGSPIKHYLVRYKAKHVSDWKPEIRIP
HNSEYVTLSGLDWNTEYEVHVVAENQQGKSEPGIISFRTAVDPTTIPDAMDGGSGLGTGA
IVGILIVVFFLLLVGVDVTCYFLNKCGLLMCIAVNFCGKAGPGAKSKDIEEGKAAFTKDE
SKEPIVEVRTEEEHTPNQEGGGPTEPNETTPLTGPEPAAADTTSTVVNLLPSTATNSVAE
SFSTAQSSPASESTTLTTSASSPTKAAPAKSPPKNSPAAQSSLLNANTQSDVGPLVDLSD
TPKVPNPAPPVSEPISPPSASADGPKSQRDPVKAPDSTLSKDLQVDGPAKEAPSALCTDS
STPAQNDGKTVKDDNTKGETEVKNATAEVKTVPNEAPQTNGNESKA
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaataggggacctcatctggggattgctattcattggctgtgcagctgccatc
caggtgcaaatcactccaacacaaggagagatcagcgtaggagagtccaagtttttcctc
tgtgaagtgttgggagatgtaaaagacatagactggtacgcccccagtggcgagaagatc
ctccccaacaggccagacatttttgtgagccgtggcgatgaaaccatgtcaaccctcacc
atataccacgccaacgtggacagtgctggtatctacaagtgtgtggcaaagaacggggac
aaggaggcccaggcaacagtccaagtgaagatctttcagaagatcaccttcgagagtgct
cccaccccgcaggagtttaatgaaggcgatgatgccgacatagtctgcaatgtggtcagc
tcgccgccacccaccatcatttggaagcacaagggctccaggatccaagttgccaaagat
gtgcgattcaagatcatggataatggccacctgcagatccgtggcatcaagaagacagat
gagggcatgtacaactgtgaggctcgtgtcatggccaggggagaaattgacttcaggatg
atcagggtcgttgttaatgtgcttcccaccatccgtgccaggcagtcagaggtcaacgcc
acagcagacattggcagctctgccttgttagcctgtgatgcggacggcttccctgaaccc
accgtcacctgggcacataacaacattgtccttgaaacgggtgataagtacagcctgaac
gaggatggctcagaattggtaataaaagatgtcaagaaagtggatgaaggagattacacc
tgcatcgccaagaacaaggcgggagagaaagccgaggaagtcagcctgaacgtgttcgtg
caacctaagatcacctacctgaataaccagactgcctcagagtttgacgatcaagtcacc
ctgacctgtgaggcttcgggcgaccccacacccaccatctcctggagtttcgataacagg
gtattgaccgaaggagagcagagccttgatagaaacattgtggtacgcagccacgcgcgg
gtgtcctctctcaccttgaaaaatgtcctcttcacgtatgccggccagtacctctgcacc
gccagcaattccattggccaggacgaccagcacatgtacctggaagtccgctatgctcca
aagatcctgggtcgagtgacagtgtacacgtgggaggggaacccagccaacatcagctgt
gaggttgaggctcaccccggagcctcagtggtttggtttagagacggcttccagctgccc
tctgccaacaccaccaacatgaagatctacaacacaccgaccatcagctacctggaggtt
actcctgattctcagaatgattttgggagctacaactgcacagcaaccaatgtgatgggc
tctgagtccaaggagttccttctgatccaagcagatgtgccatcatcgccagaaattacg
ctagtggaacctttctccagcactgcagtggtgaagtttgaggagcctgactccatgggt
ggagtgcccattatcaagtacagagtggaatggcgtttgcctggccaggattggattggc
agtgagcacaatgctaaggacgacatgaccacgatcaccattgttggcctgaagccagag
accacctatgaggtcaagatgtcagccatcaacggcaagggcgaaggcgagagcagcccg
gccaggactttcaagaccgagccagtcctttcgtcagaggtcccaccccctattgctgcc
accagtatggcccgtagggaacccagtgcccccaaactagaagtcaagatgcaggacagg
ggcaatactcttaaggtcaactggatcaagcaggatgatggcggttcccccattaaacac
tacctggtcagatacaaggctaagcatgtatctgactggaaaccagagatccgcattccc
cacaacagtgagtacgtgacgctgagcggcctggactggaatacagagtatgaggttcac
gtggtggcagagaatcagcagggcaagtcggagccgggcatcatctccttcagaacagct
gtagaccccactaccatcccagatgccatggacgggggctcaggcctgggcaccggcgcc
atcgtaggcatcctcattgttgtcttcttcctgctgttggtgggcgtggacgtcacctgc
tacttcctcaacaagtgtggactcctcatgtgcattgctgtgaacttctgtggaaaggcc
gggccgggtgctaagagcaaggacattgaggagggcaaggcggcattcacgaaagatgag
tccaaggagcccattgttgaggtgagaacagaggaagaacacaccccaaaccaagaagga
ggtggtcccactgagcccaacgagaccacgcctttgacaggacctgagcctgccgctgca
gacaccacctccacagtggtaaacttgctcccctccactgccactaactcagttgctgag
agctttagcacggcgcagagcagtcctgctagtgagagcaccacgctaaccaccagcgcc
tccagcccaaccaaagctgcccctgccaagtccccccccaaaaacagtcctgctgcccag
tccagtttgcttaatgctaacacccaatctgatgttgggcccctggtcgacctgagcgac
acccctaaagttcccaacccagcaccccctgtctcagagccaatcagcccaccctctgct
agtgctgacgggccaaagagccagcgtgacccagtcaaagcccctgacagcaccctgagt
aaggacttacaagtagacggcccggccaaggaggcacccagtgctctgtgcacagactcg
tccacaccagcccaaaatgacggtaagactgtgaaggatgataacactaaaggcgagacg
gaggtgaagaacgccacagccgaggtgaagacagttcccaacgaggctccccaaacgaac
ggcaacgaaagtaaagcgtaa
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