Epinephelus fuscoguttatus (brown-marbled grouper): 125899211
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Entry
125899211 CDS
T08419
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
125899211 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efo03400
]
125899211 (xrcc5)
DNA repair and recombination proteins [BR:
efo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
125899211 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
125899211
NCBI-ProteinID:
XP_049449270
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Position
LG13:19440913..19453311
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AA seq
726 aa
AA seq
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MAGSKSALVLCMDVGFSMSNSAPGEEPPFELAKKVIQKFVQRQVFSESKDELALVLFGTD
STKNPLDQDDQYQNITVHRNLMIPDFELLEEIANQIHPESQQADWLDALVVCMDLLQTET
KGKKCDRLNIALLTDLSTQVSSEQLDVIIENLKQAGITLQFFLPFPAEADEEGGGDADGR
GPGHPSTGKGLSREQKSGLDMVKHIMLSLDEEDGLDEIYSFRNALEQLCMFKRIERRPMA
WPCQLTIGSCLSIRIVGYKAVTEERLKKTWTTVDAQTNQKDDVKRETVYCLDDDNETEVQ
KDDTIQGFRYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFTKQNMEVQRHQFMGSQVVKMF
SGKDDEHAAVAMSALIRALDELNMVAIVRYTYDRRSNPQVGAAFPCIKPGYECLIYVQLP
FMEDLRQFTFPSLENNKKITPSDTQLAAVDSLIDSMMLVEKDDNDEQKDIFKVHHIPNPA
FQRHFQCLHHRAVSPGTSLPPMEPWLKAALERPQVITERCQAQLEEMKRKFPLTEVEKKK
KPKTSAQIFGKDSEEPDAKKAKGDEEEEEYSLADIAEGSVTSVGSVDPARDFRTLIKKKS
LPFGEVCQQLTHRIEQLLSNKNTHYYMKSITCIQAFREQSVKLGDASLYNGYLQSLKRSI
PNRGLEDFWDLLVQDVITLISKDEVEGSTVSKSEANQFLVTEEKKEEVAAPPAEDTGDVD
DLLDMM
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcaggttccaaatcagcactggtgttgtgtatggatgtggggttctccatgtccaac
tctgccccgggtgaagagcccccctttgaactggccaaaaaagtcatccagaagtttgtc
cagcggcaggtcttttcagagagcaaggatgagctggctttagtcctgtttggcacagac
tccaccaagaacccactggaccaggatgaccagtaccagaacatcactgtgcatcgtaat
cttatgatccccgactttgagcttctggaggaaatagcaaatcagatccatccagagagt
cagcaggctgattggctggatgctcttgttgtgtgcatggatctccttcagacagaaaca
aaggggaagaaatgtgatcgtctcaacattgccctcctgactgacctcagcactcaggtc
agctcagagcagctggacgttatcattgaaaacctgaaacaagctggcatcaccctgcag
ttctttttgcctttccctgcggaggctgatgaagagggtggtggagatgcggatggaaga
ggccctggtcaccccagcacaggcaaaggtctgtccagggaacagaagagtggcttggac
atggtgaaacacatcatgctgagcctggatgaggaggacggcctggatgaaatttactcc
ttccggaatgcacttgagcagctgtgcatgttcaagcgtatcgaaaggagacccatggcc
tggccctgtcagctgaccatcggcagctgtctgtctatccgaattgttggatacaaagca
gtgacagaagagagattgaagaaaacatggacaacagttgacgctcaaaccaatcagaaa
gacgacgtgaagagagagaccgtctactgtctggatgatgacaatgagacggaggtgcag
aaggatgataccatccaaggtttccgttatggaagtgatattgttcccttctccaaagtg
gatcaagaccagatgaaatacaagcatgatgggaagtgctttgcggttctcggcttcacc
aaacaaaacatggaggtacaacgccatcagttcatggggagtcaagttgttaagatgttt
tctggcaaggacgatgagcatgcagcagttgcgatgtctgctctcatcagagcgctggat
gaactcaacatggtggccattgtgcgttacacctatgaccggcgcagcaaccctcaagta
ggagcagcctttccgtgcatcaagccaggctatgagtgtctgatctacgtccagctgcca
tttatggaagacctcagacagttcacatttccttctcttgaaaacaacaaaaagatcaca
ccatcagacacccagctggctgctgtggactctctcattgactccatgatgttggtggag
aaggacgataatgacgaacaaaaggacatattcaaggtccaccacattcccaaccctgcc
ttccagaggcacttccagtgtctgcaccatcgggcagtgagcccaggcacctctcttcca
cccatggagccatggttgaaggcggctcttgagcgccctcaggtcattactgaacgttgc
caggctcagctagaggagatgaagaggaaatttcctctcacagaagtggagaagaaaaag
aagcctaagactagtgctcagatttttggcaaagactcagaggagccagatgccaagaag
gcaaaaggagacgaggaggaggaggagtatagcctggctgacattgccgagggctctgtt
acttcggtgggaagtgtggatccagccagagatttccgcactctgatcaagaaaaagagt
cttccatttggagaggtctgtcagcaactgactcacaggatagaacagttgcttagcaac
aagaacacacactactacatgaaaagcatcacctgtatccaggcttttagagagcagtcc
gtcaagctgggggatgccagtctgtacaacggctacctccagtccctgaaaagaagcatc
ccaaacagagggctggaggacttctgggacctgctggttcaagatgtaataactctgatc
agtaaggacgaggttgaaggaagcaccgtgtccaaaagtgaagctaatcagtttctggtt
actgaggagaagaaagaagaggtggctgcaccgccagctgaagatactggagatgttgat
gacttgctggacatgatgtaa
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