Epinephelus fuscoguttatus (brown-marbled grouper): 125899261
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Entry
125899261 CDS
T08419
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125899261 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efo04121
]
125899261 (mid1)
Enzymes [BR:
efo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125899261 (mid1)
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125899261 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
PRY
zf-RING_2
zf-C3HC4_3
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
125899261
NCBI-ProteinID:
XP_049449347
LinkDB
All DBs
Position
LG13:complement(24457903..24498729)
Genome browser
AA seq
690 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPIQSISAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPNETRRERATPDSKAMTSPGDRVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPLLDSHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHHVAALSDRYDKLKKSPGRFLSVVGRGHSHQE
ADQQALDSNLSSLIKRTSELESLMGKLIQTCQHVEVNATRQENKLLEECDLLINIIQQRR
QVIATKIKEGKTVRLRKLAQQIASCKQCIERSSSLIAQADQTLKETDHARFLQTAKSTCD
RVSMATASSQILLPEINLNDTFDTFALDFTREKKMLESLDYLTAPNPPVIREELCTASYD
TITVHWTSDDEFSVVSYELQYAIFTSQSNVVSLCNSADSWMIVPNIKQNHYTVHGLQCGT
KYIFIVKAINQAGNRSSEPGKLKTNSQPFKLDAKSAHRKLRISHDNLTVERDETSSKKSH
SQDRFSSHSSYGVTGNVYIDSGRHYWEALIGGSTWFAVGIAYKSAPKHEWVGKNSASWVL
SRCNNSWVVRHNSKEMPIEPSPHLRRLGVLLDYDSGSLSFYDAVGSQHLHTFDIAFAQPV
CPVFNVWNRCLTVLTGLPIPDHLEGTDYNN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggaactgacctgcccaatctgtctggagctctttgaggacccg
ctgctcttgccctgtgctcacagcctttgtttcaactgtgcccatcgcatcctggtctca
cactgcacgcccagcgagccaattcagtccatcagcgcctttcagtgtccaacctgtcgc
tatgtcatcaccctcaaccagaggggcctagagggactcaaacgcaacgttaccttacag
aatatcattgaccgctaccagaaggcttctctaagcggacctaattctcctaacgagact
cgccgtgagcgagccacccccgacagcaaagccatgacttctcccggcgaccgggtgcag
tgccagttctgtgagcaggaccctccgcaggacgcagtgaagacctgcgtcacctgtgag
gtgtcgtactgcgacgagtgtctcaaggccacccaccctaacaagaagcctttcacgggc
caccgtctaatcgagcccttactggactcccatctgcgtgggctcatgtgtctggaacat
gaggacgagaaggtcaacatgtactgtgtgacagatgaacagttgatctgtgcattgtgt
aagctggttggccgacaccgggaccatcatgtggcggccctcagtgaccggtatgacaaa
ctcaagaaatcgcctggccgctttctcagtgtggtgggccgtggtcattcacaccaggag
gcagaccagcaagctttggattccaacctcagcagtctaatcaagaggaccagtgagttg
gaaagtctgatgggcaaacttatccaaacctgccaacatgtggaggtaaatgcgacgcga
caagagaacaagctgctggaggagtgtgacctgctgattaatatcatacagcagcgaaga
caagtcattgcgaccaagataaaggagggaaagactgtgcggctgaggaaactagcccag
cagatagccagctgcaagcagtgcatcgagcggtcctcctccctcatcgctcaggccgac
caaactctgaaggagacggaccacgctcgcttcctccagacggcaaaaagcacttgcgat
agagtttccatggcaacggcttcctctcagatcctgttaccggaaattaacctgaatgac
acctttgatacttttgctttggacttcacaagggagaagaaaatgctagaaagcttggat
tacctcacagcaccaaatccaccagtaatccgagaggaattatgtacagcgtcgtacgac
acgatcacagttcactggacatcagatgatgaattctctgttgtatcgtatgaacttcag
tacgccatcttcaccagccaatctaatgttgtcagtttgtgtaactctgctgacagctgg
atgattgtaccaaacattaagcagaatcactacaccgtgcacgggctccagtgtggcacc
aagtacatctttatagtgaaggccataaaccaggctggaaaccgcagcagcgaaccaggg
aagctcaaaaccaacagtcaaccattcaagctggacgcaaagtcagctcacaggaagctg
aggatttcccatgacaacttgacagtggagagggacgaaacgtcgtccaagaagagccac
agccaggaccgcttctccagccacagcagctacggtgtcacaggaaatgtctacatcgac
agcggtcgccattactgggaagctctgattggaggaagcacatggtttgcagtgggcatc
gcatacaagtcagcaccaaagcatgagtgggttggaaagaactctgcctcctgggtactg
tcccgatgcaataactcttgggtggtgcgtcacaacagcaaggagatgcccatcgagccc
tccccccacctgcgtcgtctcggagtattgttggactatgactccgggtctctgtctttc
tacgacgccgtcggctctcagcacttgcacacattcgatattgccttcgctcagccagtc
tgccccgtgttcaacgtgtggaacaggtgtttaacggtcctcacaggactgcctatccca
gatcacttagaggggacggactacaacaactga
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