Epinephelus fuscoguttatus (brown-marbled grouper): 125899410
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Entry
125899410 CDS
T08419
Symbol
itga4
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04510
Focal adhesion
efo04512
ECM-receptor interaction
efo04514
Cell adhesion molecules
efo04672
Intestinal immune network for IgA production
efo04810
Regulation of actin cytoskeleton
efo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125899410 (itga4)
04514 Cell adhesion molecules
125899410 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125899410 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125899410 (itga4)
04810 Regulation of actin cytoskeleton
125899410 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
125899410 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
efo04147
]
125899410 (itga4)
04515 Cell adhesion molecules [BR:
efo04515
]
125899410 (itga4)
04090 CD molecules [BR:
efo04090
]
125899410 (itga4)
Exosome [BR:
efo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125899410 (itga4)
Exosomal proteins of other cancer cells
125899410 (itga4)
Cell adhesion molecules [BR:
efo04515
]
Integrins
Integrin alpha subunits
125899410 (itga4)
CD molecules [BR:
efo04090
]
Proteins
125899410 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
GNVR
Motif
Other DBs
NCBI-GeneID:
125899410
NCBI-ProteinID:
XP_049449659
LinkDB
All DBs
Position
LG13:31512797..31544047
Genome browser
AA seq
1026 aa
AA seq
DB search
MCPSAGSMCLCCSLILVLVLVHPAAGYNLDQEHSLEFNGPHSSMFGYSVLLHHHGAHSWL
VVGAPVANSTSSPSVRSPGAVYRCDISAQPGHCLPLHADVVTCGKTCDAESDHQWLGVSL
ARQPGDSGGHILACAHRWKNVFYSKKDGQNHKLPNGVCYRYSSDLTNAQPIIPCYRDHQR
KFGEDYGSCQAGISNFLTEDLIIMGAPGTSYWTGSVLVFNTSSRGMSVYLDDDTGAVSFG
SYLGYAVGAGHFLGPSSVEVVGGAPQYNQRGKVFIFAVDSNMLRVITEVSGKELGSYFGS
SVCVVDLNADGLSDLLVGAPMATGITREEGRVHVYINKGEANLLEAEFQLTGSNAYAARF
GETIADLGDLDDDGYSDVAVGAPQEDELKGAVYIYNGRKEGISPTPSQRITGSTLGRDLR
MFGQSLSSGIDIDANGYHDVAVGAFLSDSAVVLRTRPVIQVKAFLTLPEQIDQRVALCHE
HKTPTVCLKVTVCFSVKSRHFRGAIDLQYNLTSDLLHKPSFPHRFYFHGNGSSNSTKGHV
RARHGQLTCTTHVAYQRKDVRDIFTPVRFEVSYSHRETSTHRTKNFPPLKPILQQSAGHQ
NTISNQTWFARSCSLVNCSANMQLSAQLVLPHQQQYFPLGSGQTIMLKTSLLNSGDDAFL
PRLTLRFPNNVHYIKVLQNQDNVVSCDVTQEVNSTKAGVDCSITSLVLSAQGQLNISFLL
DVNQNSTPGDIMIHVSTSSDNYEREEYLHDNSASLLLPLKYGVNVNIHGFVTPTSFVFGD
EDTTPVDCYPERFNYTYKVLNSGPSRSLDTVVDIMLPKILAPYRHRLLQVVDWQTSQGVC
SISDTTMSVVEDCDVPEASFIKQIVFFFSSTSTRRMFCSHSDDLCERLVCRLGDLDVGRD
TLIQLEIKLNPAVLLQAPGRHGIMRIESTAMMSNPRESPHTILIHEQPVAEVVVEAVFTQ
KPSTTVKVFIIVISLILGLMILAALIWCLWKAGFFKREFKKKKEEEEFNRDSWDYVPKHD
KRESTS
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtgtccctcagcgggcagcatgtgtttgtgctgcagcctgatccttgtcctggtcctg
gtccatcctgcagcagggtacaatctggatcaagaacacagtctggagttcaatggcccc
cactcatccatgtttggatattcagtcctgctgcatcaccacggagcccacagctggttg
gtggttggagctccagtcgcgaactcgacctccagtccatcagtccgatctccaggagct
gtttaccgctgcgacatctcagctcagcccggccactgcctccccttgcatgctgatgtg
gtgacctgtgggaagacatgtgatgcagagagtgatcaccagtggctgggagtcagtctg
gccagacaacctggagacagcggaggacacatcctggcatgtgctcaccgctggaagaac
gtcttttactcaaagaaggacggtcagaaccacaagctgcctaacggagtgtgttatcgc
tacagcagcgacctgacaaatgcccaacctatcattccctgctacagagaccaccaaagg
aaattcggtgaggattatgggtcatgtcaggctggtatttccaacttcctgacagaggat
ctgatcatcatgggggctccagggacgtcctattggactggttcagttctggtcttcaac
acgtctagcagagggatgtctgtgtacctggatgacgacactggagccgtcagctttgga
agctacctgggttacgctgttggagctggtcatttcctgggtccctcctctgtggaggtc
gtgggcggagctccgcaatacaaccagaggggcaaggtcttcatcttcgcagtagacagc
aacatgctgcgggtcatcactgaagtgtccggaaaagagctgggatcttactttggctcc
agcgtgtgtgtggtggatctgaacgctgatggtttgtcggatctgttggttggtgctccc
atggcaacgggcatcaccagggaggagggaagagtccatgtgtacatcaacaagggggag
gctaacctgttggaggcggagtttcagctgactggtagtaatgcctacgctgctcgattt
ggagagaccatcgctgacctgggagacctggatgacgacggttactctgatgtggcggtt
ggtgccccacaggaagacgagctaaaaggagccgtctacatttacaacggcaggaaggag
ggcatctcaccaactccatctcagaggattaccggatccacactgggtcgtgacctcagg
atgttcggccagtcgctgagctctggcattgatattgatgctaacggctaccacgatgtg
gcggtcggtgctttcctctcggactcggctgtggttctcaggacccgacccgtgattcag
gtgaaggcgtttctgactctgcccgagcagattgaccagcgggtggcgctgtgccacgaa
cacaagactccaactgtctgccttaaagttactgtctgcttcagtgtgaagtccagacac
ttcagaggagctatagatcttcaatataatttgacctctgacctcctccataaaccatcc
ttccctcatcgtttctatttccatggtaacgggtcatccaatagcacaaaggggcatgtg
agagcacgacatggccagctcacttgtacaacacacgtggcttaccaacggaaggacgtg
agggacatttttactccggtccggtttgaagtttcctacagtcacagagaaacaagcacc
cacagaaccaaaaacttccctccattaaaacccattctgcagcagagcgcaggacaccag
aacaccatctcaaatcagacttggttcgctcgttcctgttcgctggtgaactgttcggcc
aacatgcagctgtcggctcaactagtgctaccacatcagcagcagtactttcctctcggc
tctggacagaccatcatgttgaaaacctcactgctgaactctggagacgacgccttcctg
ccacgactgacgttacgtttccccaacaacgtccactacattaaagtactgcagaaccag
gacaacgtggtcagctgtgatgtcacacaggaagtcaacagtacaaaggcaggtgttgac
tgcagcatcaccagcctcgtcctctcagcccaaggccagttgaatatcagtttcctactg
gacgtcaaccaaaacagcacacctggtgacatcatgattcatgtcagcaccagcagtgat
aactatgagagggaggagtatctccatgacaactccgccagtctcctccttcctctgaaa
tacggagtcaatgtcaacatccacggatttgtgactcccacttcctttgtgtttggagat
gaagacacgactccagttgactgctaccctgaaagattcaactacacatacaaggtgtta
aactctggtcccagcaggtctctagatactgtggttgacatcatgctaccgaagattctc
gcaccttaccgacacagattgctgcaggtggtcgactggcagacgtctcagggtgtgtgt
tcgatcagtgacacaactatgtcagttgtcgaggactgtgacgtccctgaagcctccttc
atcaaacagatcgtcttcttcttctcgtccacctccactcgcagaatgttctgtagccat
agtgatgatttgtgtgagcggttggtgtgtcgccttggtgacctggacgtggggagagac
accctcatccaactggagatcaaactgaaccctgctgtacttctgcaagctccgggtcgt
catggtatcatgaggatagagagcacagcgatgatgtcaaaccccagagaaagtcctcac
accatcctcatccacgaacaacctgtagcagaggtggtggtggaagccgtttttacccag
aagccctcaacaacagtgaaggtcttcatcatcgtcatcagtttaattttgggtctgatg
atcctggctgctctcatctggtgtctgtggaaggctggtttcttcaagagggaattcaag
aagaagaaggaggaggaggagttcaacagagacagctgggactatgttcctaaacacgac
aaaagagagagcacttcctaa
DBGET
integrated database retrieval system
