Epinephelus fuscoguttatus (brown-marbled grouper): 125899481
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Entry
125899481 CDS
T08419
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04382
Cornified envelope formation
efo04510
Focal adhesion
efo04512
ECM-receptor interaction
efo04514
Cell adhesion molecule (CAM) interaction
efo04518
Integrin signaling
efo04810
Regulation of actin cytoskeleton
efo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125899481 (itga6a)
04514 Cell adhesion molecule (CAM) interaction
125899481 (itga6a)
04518 Integrin signaling
125899481 (itga6a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125899481 (itga6a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125899481 (itga6a)
04810 Regulation of actin cytoskeleton
125899481 (itga6a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125899481 (itga6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
efo04147
]
125899481 (itga6a)
04515 Cell adhesion molecules [BR:
efo04515
]
125899481 (itga6a)
04090 CD molecules [BR:
efo04090
]
125899481 (itga6a)
Exosome [BR:
efo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125899481 (itga6a)
Exosomal proteins of breast milk
125899481 (itga6a)
Cell adhesion molecules [BR:
efo04515
]
Integrins
Integrin alpha subunits
125899481 (itga6a)
CD molecules [BR:
efo04090
]
Proteins
125899481 (itga6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
FG-GAP_2
Integrin_alpha
DUF7942
Motif
Other DBs
NCBI-GeneID:
125899481
NCBI-ProteinID:
XP_049449818
LinkDB
All DBs
Position
LG13:22275287..22302730
Genome browser
AA seq
1092 aa
AA seq
DB search
MLLPLLQGGPAAVYVALLFYFLEPAVVVAFNLDTSHVIRKDGEPGSLFGFSLAMHRQLNP
DKRMLLIGAPRAEALGKQTANITGGLYKCEVTQTNDCERVEFDSEENVLVENKENQWMGV
TVQSQGPGGKIVTCAHRYQRRMFVDTTQESRDITGRCYVLSQDLSIDSSSDEDGGNWNFC
EGRTRGHEMFGSCQQGLAATFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLLEMGVFDDG
PYEVGDEHLLNPELVPVPANSYLGFSLDSGHSITGKGTLTVVAGAPRANHSGAVVLLKKE
NQTSGRLLVEHTLHGLGLASSFGYDVAVVDLNGDGWEDVVVGAPHFYMKEGDIGGAVYVY
INQAGRWEKVTPVRLNGTKDSMFGLAVENIGDINQDSYRDIAVGAPYDDGGAGKVYIYHG
SAQGIKTSPAQVLSGREHNMRLFGYSLAGNMDLDGNSYPDLAVGSLSDTAFIYRARPVIR
IRRDVKISPREIDLTIKNCGNSICLTVEACFSYTAKPTSYNPKLTISYSVEADGDRRKQG
LPSRVIMLNKTHTETDYQFNSTLDLRGQNQKTCVKILAKVKDNIKDKMRSLPFEVSAEIV
GTKQKKTKNSLPQLMPILESSQSSKDVIEINFIKEGCGSDHVCRSNLKMKYKLCYKKSNL
DEYPPLPITNNVPEFHLNYERKDLALRVTVDNMHEDDAYEAKLVGTFPDTLSYSGVRSTP
TTMEKPIICTANQNGSQADCELGNPFKRDSKATFYIILSTDGITQDTTELDIDLQLQTTS
VQENIVPVKVKVKVIIELPLSVSGEASPNQVTFGGVVKGESAMKTEEEIGSLIMYSFRIN
NLWKSLKPSVKASLHIQWPKFNKNGKWLLYLVRITSTGPEDVVCSPESEVSSLKHIQESS
ASRTKREIGERKAVGKMSSLSDKRKVLTCERELKCVVFKCPLQGLDGTTVELRSRLWNST
FIEDYASILNTHIVVKASLVLHTQAKNMILTTPHTDVIVAVSPEGAVSQHSGVPWWIILI
AVLAGILILALLVYLLWKCGFFKRTKQDDSVPRYHAVRIRKETPDYKDGKVKLDPFEKKQ
WMTTWIDDENYS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgccactgctgcagggaggacccgctgctgtttatgttgcacttttattttac
tttctggagccagctgtggtggtcgccttcaaccttgacaccagtcatgttatcaggaaa
gacggagagccggggagtttgttcgggttctctctcgccatgcaccggcagctcaacccg
gataaacgcatgctgttgatcggagcgcccagagccgaagctctgggaaaacagacagcc
aacatcacaggaggcctttataaatgtgaagtcactcagaccaatgactgtgagcgtgtt
gaatttgatagtgaagagaacgtacttgttgagaacaaggagaatcagtggatgggggtg
acggttcagagccaggggcctgggggaaagattgtgacctgtgctcatcgctatcagagg
cgcatgtttgtggacaccactcaggagtccagggacatcactgggcgctgttatgtcctg
agtcaggacctgtctatcgactcgtcctctgatgaggacggaggtaactggaacttctgt
gagggcagaaccagagggcacgagatgttcggatcttgtcagcagggtttggctgccacc
ttcaccaaggactaccattacgtggtgtttggagcaccgggggcttacaactggaaaggc
attgtacgagtggagcaaaagaacaacactctgctggagatgggagtgtttgatgacggc
ccatatgaagttggagatgagcatctcttgaaccctgagcttgtgcccgtacctgccaac
agctacctcggattctccctcgattcgggacacagcatcaccggtaaaggcaccctgacg
gtggttgctggagcgcccagagccaatcacagtggagctgtggtcctgttgaagaaagaa
aaccaaacctccggaagacttctggtggagcacactctgcacgggctgggactcgcatcc
tcatttggatacgatgtggctgtggttgacctaaatggtgatggatgggaagacgtagtt
gtaggagcccctcatttctacatgaaggagggagacattggaggagctgtttacgtgtac
atcaaccaggcaggaaggtgggaaaaagtcactcctgtccgtctaaacgggaccaaagac
tccatgtttggactggccgtggagaacatcggcgacatcaatcaagactcatatagagac
attgccgttggagcgccttatgatgatggcggtgcaggaaaagtgtacatttatcatggc
tctgcacaaggaatcaaaaccagccctgcacaggtcctttcaggaagagagcacaacatg
cgactctttggttattctctggctgggaacatggacctggatggtaactcttatccagac
ctggctgtcggctctctgtcggacacagcttttatctacagggcacggccagtaatcaga
atcaggagagatgtcaaaatatctccacgggaaattgaccttacaatcaaaaactgtggt
aacagcatttgcttaactgtggaagcatgcttcagctacacagcaaaacctacatcttac
aacccgaaactgactatcagctattctgtcgaggctgacggagatcgcaggaagcagggg
ctgccttccagagtgataatgctcaacaaaacccatactgaaactgactaccagtttaac
agcaccttggacctccgcggccaaaaccagaaaacatgcgtcaagatattagccaaagta
aaggacaacattaaggacaagatgcgcagccttccctttgaggtgtctgcagaaattgtg
ggtactaaacaaaagaagacaaagaacagccttcctcagctcatgcccatattagagtcc
tctcaatcgagcaaagacgtcatcgagatcaactttataaaagaaggatgtgggagtgat
catgtttgccggagtaacctgaagatgaagtacaagttatgctacaaaaagagcaaccta
gacgagtacccccccctacccatcacgaacaacgtccctgagtttcatctgaactacgag
aggaaggacttggctctgcgtgtgacagtcgacaacatgcatgaagatgatgcttacgag
gcaaagctggtggggactttcccagatacactgtcatattctggagtccgctcaactccg
acaacgatggagaagccgatcatctgcacagccaatcagaacggctctcaagcggactgt
gagctgggcaatccttttaagagagactcaaaggctacattttacatcatcctgagcact
gatggtatcacccaggacaccaccgagctggacatcgacttgcagctccaaacaacaagt
gtgcaagaaaatattgtccctgttaaagtgaaggtgaaagtcatcattgagctgccgttg
tcggtcagtggggaagccagccccaatcaggttacttttggaggtgttgtgaaaggtgaa
agtgccatgaagacagaagaagagattggaagtttgattatgtattctttcagaataaac
aacttgtggaagtctttgaagccttctgtcaaagcctctcttcacattcagtggcccaaa
ttcaacaaaaatggtaaatggcttctgtacctggtgaggatcacctccacaggaccagag
gacgttgtgtgttctcctgagtctgaagtcagctctctcaaacacatccaggagtcctct
gcatccaggacaaaacgggaaattggagaaagaaaagctgttggcaaaatgtcttcgctc
tcagacaaaagaaaagttctgacatgtgagcgtgagctcaaatgtgtggtgttcaagtgc
cccctacagggcctggacggtacaacagttgagctgaggtctcgtctctggaactcgacc
tttattgaggactacgcctctattttaaacacgcatattgttgtgaaggcctcgctcgtc
ctccacactcaggctaaaaacatgatcctgacgactcctcacactgatgtgatagtggct
gtgtctcctgaaggtgcagtatcgcagcacagtggagttccctggtggatcatactgatc
gctgttcttgcaggcatcttgattttggctttattggtgtatctgctctggaagtgtgga
ttcttcaaacgcaccaaacaagacgacagcgtccctcgttaccacgccgtgcggatacga
aaggaaactcctgattataaagatggaaaagtcaaacttgatccttttgaaaagaagcag
tggatgacgacttggatcgatgatgaaaattactcatga
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