Epinephelus fuscoguttatus (brown-marbled grouper): 125899574
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Entry
125899574 CDS
T08419
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04137
Mitophagy - animal
efo04144
Endocytosis
efo04145
Phagosome
efo04148
Efferocytosis
efo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125899574 (rab5b)
04145 Phagosome
125899574 (rab5b)
04137 Mitophagy - animal
125899574 (rab5b)
04148 Efferocytosis
125899574 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125899574 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125899574 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
efo04147
]
125899574 (rab5b)
04031 GTP-binding proteins [BR:
efo04031
]
125899574 (rab5b)
Membrane trafficking [BR:
efo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
125899574 (rab5b)
Endosome - Lysosome transport
125899574 (rab5b)
Exosome [BR:
efo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125899574 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
125899574 (rab5b)
Exosomal proteins of colorectal cancer cells
125899574 (rab5b)
Exosomal proteins of melanoma cells
125899574 (rab5b)
GTP-binding proteins [BR:
efo04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
125899574 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
B12-binding
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
125899574
NCBI-ProteinID:
XP_049449934
LinkDB
All DBs
Position
LG13:complement(40382239..40387822)
Genome browser
AA seq
216 aa
AA seq
DB search
MSSRGSGGRSNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLAERRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagagggagtggaggccgctccaacggcacactaccgcagaccaagatctgc
cagttcaagctggtgctgctgggagacatggctgtgggcaagtccagcctggtgctgcga
ttcgtcaagggacagttcgatgagttccaggagacgaccataggagctgcgttcctggct
cagtcggtgtgtctagacgacaccacagtgaagtttgagatctgggacactgcaggacag
gagcgataccacagcctggctccgatgtactaccgtggtgctcaggcggccattgttgtc
tttgacatcaccaagccggagacctttgagagagccaaggcctgggtgaaggagctgcag
aggcaggccagtcccaacattgttattgccctggccgggaacaaggctgacctggcagag
aggagactagtagagtacgaggaggcccagacgtatgctgaagacactggcctgcttttt
atggagacctctgctaagacagccatgaacgtcaatgagctcttcctggccattgcaaaa
aagatgccaaaaacagacacccaaaaccctacacatgcagcgcgacaccggggagtcaac
ctccaggacccagatgcccactccacccgagcctgctgcggtgggaactaa
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integrated database retrieval system
