Epinephelus fuscoguttatus (brown-marbled grouper): 125899990
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Entry
125899990 CDS
T08419
Symbol
pms1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efo03400
]
125899990 (pms1)
DNA repair and recombination proteins [BR:
efo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
125899990 (pms1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HMG_box_2
HATPase_c
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125899990
NCBI-ProteinID:
XP_049450669
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All DBs
Position
LG13:7387948..7411672
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AA seq
922 aa
AA seq
DB search
MKQLPPDTVRLLSSSQVITSVVNVVKELMENSLDAGASSIDVKMENYGLDRIEVRDNGHG
IKAEDTPVMAVAHFTSKIGSHEDLEQLETYGFRGEALGSICAVAEVAVITKTEEDDISTH
YTLNFTGEIVSKKPSHLGQGTTVSVLKLFKNLPVRRQYYSSTKKCKEELKKVQDLLMAYA
IIKPDLRVTLVHNKVVVWQKAKVADHRSALVATLGAGAVANLLPCHHHQEQPEIVLDGFF
PKPGADYSSTSSSNPDKTFIFVNNRPVHQKDIVKLVRQHYTAQYPDDQARNRYPTLMLKI
MVPPSSVDINLTPDKTQVLLHNKEAVLMAVEIFLVSVYGHRPSGDPPAEKHLSHETSLSL
SSPSQTDASQSYNEQSKDMDDSLTNHHGNILGDVPDHSETALSTAGSTAASLDCQTSNGS
SSSSVAEDWIINQIPAGLESNFSLCDDEMAQSCTPTADTGSASKSSERLEDNAASSADAS
KDHISAEDWSRGTALTDPVSREPLLPVRIHQPSKNNNSDSDEIKCPDSSNKKMFNAITEK
RAALTAYDLISNRAMRAPLSPAALFEKEARTEILREKPTASLQDISITVHERWKNLREED
RKKYEEKARKHLEHHDQRTKLASAEGPRETSVSTPRGHAQGQKRKAPLSNQQLLDQLFSA
QPQKKTRSPAPKPSQPLPCSVAALRLQLQRLSSQSSTVPRGLRLVNRLASLSAWVILCGQ
RLMLLNPFRVEEALLFKRLLENNILPAVSLQNPIQLTDGNLGGAEYTEALCNMEKQSPEL
NGGALFSDPRLVANGFKIQLTPGLTSAERHLEVTAMADCVPFLGVEDLREILTAVLHRKA
RTVQECRPLKVTNYLQGEAVRLARQLPTKLSREDVEETLLRMDKQLAESNRTCIHGRPFL
QHLSDIPTTDQEAKVLLKPLEL
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagctgcctccagatactgtgcggttgctgtccagctcccaggtcataacctct
gtggtgaacgttgtgaaagaattgatggaaaattccctggacgctggggcctcaagcatt
gatgttaaaatggagaactatggtttggatcggatagaagtgcgtgataacggccatgga
atcaaagctgaagatactcctgtgatggccgtggcacattttacttcaaagatcggtagc
cacgaagacttggagcaacttgagacatatggcttcagaggagaggcactgggctccatc
tgtgccgtggctgaggtggctgttattacaaagacagaggaggatgacatcagcacccac
tacacacttaacttcacaggggagattgtttctaagaagccttctcacttaggtcaaggt
acaacagtgagcgtactgaagcttttcaagaatcttccagtgagacggcagtactattcc
tccaccaagaagtgcaaggaggaattgaagaaggtgcaggacctgctgatggcctatgcc
attattaaacctgacttgagagtcacacttgttcacaataaggtggtggtttggcagaag
gccaaggtggctgatcatagaagtgccctcgtcgctacactgggggccggcgccgttgcc
aacctgctcccttgccaccatcaccaagagcaaccagagattgttttagatggctttttt
ccaaagcctggagcagattactcttctacaagctcatctaaccctgacaaaacatttata
tttgtcaacaaccgacctgtccaccagaaagatatagtgaagttggtgcgtcaacactac
accgctcagtatccagatgaccaggccagaaaccgctaccccaccctcatgcttaaaatt
atggtcccaccatcctcagtcgacatcaatctgacaccagacaagacccaggttcttctt
cataacaaggaggctgtgctgatggcagtagagatatttctggtttctgtctatggccat
cggcccagtggtgacccaccagctgagaagcacctcagtcatgagacgtccctgtcacta
tctagtccttcgcagactgatgcttcacaatcatacaatgaacaaagtaaagacatggat
gacagtctcaccaaccaccacggtaacatccttggagatgtacctgaccacagcgaaaca
gctctgtcaacagcaggaagcactgctgcttcattggactgccagacctcaaacggcagc
tcttcatcctctgtagcagaggactggatcatcaaccaaatcccagctggacttgagtct
aacttttctctctgtgatgacgaaatggctcaaagctgcaccccaacagcagacacaggt
tcagcaagcaagtcctctgagagacttgaggacaatgctgcatcaagtgcagatgcgagc
aaagaccacatatcagctgaagactggagcagggggacggctttgaccgaccctgtatca
cgagaacccttactgcccgtcagaatccaccagccctcaaagaacaataattccgactca
gatgagatcaagtgtccagacagctctaacaaaaagatgttcaatgctataacagagaag
cgggctgctctgacagcctacgacctgatcagcaaccgtgccatgagggcaccactgtct
cctgccgccctgttcgagaaggaggccagaacagagatcctcagggagaagcctacagcc
agcctgcaggatatcagcatcaccgttcatgagaggtggaaaaatctgagggaggaagac
cgtaagaagtatgaggagaaggcaagaaaacacctggaacaccacgaccaaaggaccaag
ttggcctctgctgaaggccccagagagacgagcgttagcaccccaaggggacatgcacag
ggccagaaacgcaaggccccactgtccaaccagcagctgttagaccagctcttctctgca
cagccccaaaagaagacaaggagccctgcacctaagccctcgcagcccctcccctgcagt
gtagctgcccttcggctgcagcttcagcgcctttcatcccagagcagcacagtgccacgg
ggcctccgtcttgtaaaccggctggcctctctgagcgcctgggtcattttatgtggtcag
aggctcatgttgttaaacccatttcgagtggaggaggccttgctgtttaagagactccta
gagaataatatacttccagcagtgagtctgcagaaccctatacagttaacagatggaaat
ctagggggagctgaatatactgaagctttgtgcaacatggagaaacaaagccctgagcta
aatggaggggccctcttctctgatcccaggcttgtggctaatgggtttaaaatccaactc
actccaggcctcacgtcagccgagagacatctggaagtgacagcaatggcagactgcgtg
cctttcctcggtgtggaggaccttagggagatcctgactgcagttcttcacagaaaggcc
aggaccgtgcaagagtgccggccacttaaagtcacaaactacctacaaggtgaagcagta
cgacttgcccgtcagttacctacaaagttatccagggaagatgtggaggaaacccttcta
cggatggataagcagctcgctgagagcaaccggacctgcatccatggacgaccatttctc
caacacctatctgacatccctactacagaccaggaagctaaagttctgctgaagccttta
gagctgtga
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