Epinephelus fuscoguttatus (brown-marbled grouper): 125900375
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Entry
125900375 CDS
T08419
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04137
Mitophagy - animal
efo04140
Autophagy - animal
efo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125900375 (hif1aa)
04137 Mitophagy - animal
125900375 (hif1aa)
04148 Efferocytosis
125900375 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125900375 (hif1aa)
Transcription factors [BR:
efo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125900375 (hif1aa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
125900375
NCBI-ProteinID:
XP_049451276
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Position
LG14:complement(21499503..21517740)
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AA seq
754 aa
AA seq
DB search
MDTGIVPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAQQLPLPHSVSSGLDKASIMR
LTISYLRMRKLLSAADEPVADEETELEIQLNSSYLKVLDGFLMVLSEDGDMIYLSENVNR
CLGLAQFDLTGHSVYDFIHPCDQEELREMLIHKIGSKKTKEPNTERSFFLRMKCTLTSRG
RTVNVKSATWKVLHCAGHIRVYDNNVEDTSNGHKEPPVPYLVLICDPIQHPSNIEVPLDT
KTFLSRHTMDMKFTYCDERITELMGYDPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQ
VSTGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKMIFSLEQTED
VKPVKEEQVGEEKVVVKSSQPDMSPTLLKEEEKVPELDVIRLFTQAVEAQPLVSLYDQLK
EEPEALTLLAPAAGDAIISLDFSCPDSDIQLLKEVPLYNDVMLPSTSDKLALPLSPLPPS
EPLDVTTTSSEVAKAESFAPAPSTTSTSHSSSETDSSLDFCFPMDSEMSSDFKLDLVEKL
FAIDTEPKTPFSTQTMDDLDLEMLAPYIPMDDDFQLRSLTPDEPLSCGSVKSLQSSPVHV
TQDIHSYPSSPFSAPSSRTASPAPLSARHPVTIVTKRTPQLDKEVSLRTLAAQNAQRKRK
LDDVREMIEQGTLSKEHVEKGKKLKPSESGTTRTILLLPTDVASRLLGSTAEGTSSLFTL
PQLTRYDCEVNAPLQGRQYLLQGEELLRALDHIN
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtacccgaaaagaaaagggtgagctcggagcgaaggaaggagaag
tcaagggatgcagcacgatgccggcgtgggaaggagtcggaggtgttctacgagctggcc
cagcagctgcccctgccccacagcgtcagctccggcctggacaaggcctcgataatgagg
ctcaccatcagctacctgcgcatgaggaaactgctcagtgctgcagatgagccagtggca
gatgaggaaacagagcttgagatacaactaaacagctcctacctaaaggttctcgatggc
tttctcatggtgctgtctgaagacggagatatgatctatctctctgagaatgtcaacagg
tgcctggggctggcacagtttgacctgactggacacagtgtgtatgacttcatacatccc
tgcgaccaggaagagctgagggagatgctgatccacaaaataggctccaaaaagaccaag
gaaccaaacacagagcgcagcttcttcctccgaatgaagtgcactctcacaagcagaggc
cgtactgtcaacgtcaaatcagctacatggaaggtgctccactgcgcaggtcatatccgt
gtatatgacaacaatgttgaggacacttccaatgggcacaaggagccacctgtcccctac
ctggttttgatctgtgaccccatccaacacccttccaacatcgaggtccccctggacacc
aagacatttctcagccgccacacaatggacatgaagttcacgtattgtgacgagaggatc
actgagctcatgggttatgatccagatgacctgttgaatcgctctgtgtatgagtactat
cacgctctggactcagaccatcttaccaagactcaccacaacttgtttgcaaagggccag
gtcagcacaggccagtaccggatgttggctaagaggggaggctttgtgtgggtggaaaca
caagccactgtcatctacaacaacaagaactcccagccacagtgtgttgtctgtgtcaac
tttgtgctcagtggcatccaggaggagaaaatgatcttttctctggagcaaactgaggat
gtgaagccagtgaaggaggaacaggtgggggaagaaaaggttgtagtcaagagcagccag
cccgacatgtctccaaccttgctgaaggaggaggagaaagttccagagctggacgtgatc
agactgttcactcaggcggtagaggcccagcctctggttagcctgtatgaccaactgaaa
gaagagccagaggccctgaccctgctggcgccagctgctggagatgccatcatctccctg
gacttcagctgccctgattcggacatccagctgctgaaggaggtgcctctctacaatgat
gtaatgcttccctctaccagtgacaagctggctctgcctctttcccctctgccacccagc
gagcctctcgatgtcaccaccaccagctctgaggttgccaaagctgagagctttgctcca
gcaccttccacaacatcgaccagccacagctcctcagagaccgacagttcgctggacttt
tgtttccccatggactcagagatgagctcagatttcaaactagacctggtggagaagctg
tttgccattgatacagagccgaagacccccttcagcacacagacaatggatgacttagat
ctagagatgttagcgccctacatccccatggatgatgacttccagctgcgcagtctgacc
ccagatgagcctctttcttgtgggtcagtcaaatccctccagagttctccagtccacgtc
acgcaggacatccacagctatcccagctccccattcagcgcaccaagcagtcgcacagct
tccccagcaccacttagcgcccgtcatcctgtcaccatcgttactaagaggaccccacag
ctggacaaagaagtctcgctcaggaccctggcagctcaaaatgcacaacgcaaaagaaaa
ctggatgacgtaagagagatgattgaacaggggactttgtccaaggaacacgtggagaag
ggcaaaaagctgaagccctcagagtcgggaacaaccaggaccatacttctgctgcctaca
gatgtggccagtcgtctgctgggcagcacagcagagggcaccagctccctttttaccctg
ccacagcttacccgctacgactgcgaggtcaacgcccccttgcagggtcgccagtacctg
ctgcagggggaggaactgctgcgcgctctggaccacatcaattga
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