KEGG   Epinephelus fuscoguttatus (brown-marbled grouper): 125900478
Entry
125900478         CDS       T08419                                 
Symbol
actn1
Name
(RefSeq) alpha-actinin-1 isoform X1
  KO
K05699  actinin alpha 1/4
Organism
efo  Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04510  Focal adhesion
efo04517  IgSF CAM signaling
efo04518  Integrin signaling
efo04519  Cadherin signaling
efo04520  Adherens junction
efo04530  Tight junction
efo04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:efo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    125900478 (actn1)
   04518 Integrin signaling
    125900478 (actn1)
   04519 Cadherin signaling
    125900478 (actn1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125900478 (actn1)
   04520 Adherens junction
    125900478 (actn1)
   04530 Tight junction
    125900478 (actn1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    125900478 (actn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:efo04131]
    125900478 (actn1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:efo04812]
    125900478 (actn1)
   04147 Exosome [BR:efo04147]
    125900478 (actn1)
Membrane trafficking [BR:efo04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    125900478 (actn1)
Cytoskeleton proteins [BR:efo04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     125900478 (actn1)
Exosome [BR:efo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   125900478 (actn1)
  Exosomal proteins of colorectal cancer cells
   125900478 (actn1)
  Exosomal proteins of bladder cancer cells
   125900478 (actn1)
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_7 EF-hand_5 XisI
Other DBs
NCBI-GeneID: 125900478
NCBI-ProteinID: XP_049451459
LinkDB
Position
LG14:complement(9182523..9274621)
AA seq 890 aa
MDQYDGDQDYMQQEDDWDRDMLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDG
LKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNAKM
TLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCAL
IHRHRPELIDYGKLRKDDPMTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYV
SSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRMP
ENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVS
DINNAWGNLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEAWTEGKEEMLQKRDY
ETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQRICDQ
WDTLGALTQKRSEALQRTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQDTFIVHTIE
EIQGLSTAHEQFKATLPEADKERQAILGIHNEIAKIVQTYHVNIAGTNPYTTINPQEINA
KWDKVRQLVPQRDQALIEEHARQQNNERLRRQFANQANVIGPWIQTKMEEIGRISIEMHG
TLEDQLTHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLT
TIARTINEIENQILTRDAKGISQEQLNEFRASFNHFDRDHSGTLGAEEFKACLISLGFDI
ANDAQGENEFSRIMSIVDPNRMGIVTFQAFIDFMSRETADTDTADQVMASFKVLAGDKNY
ILADELRRELPPDQAEYCIARMAPYTGPDGVPGALDYMSFSTALYGESDL
NT seq 2673 nt   +upstreamnt  +downstreamnt
atggatcagtatgacggagaccaagactacatgcagcaggaagatgactgggatcgggat
atgctcctggatcctgcatgggagaagcagcagagaaagacattcacagcttggtgtaac
tctcacctgaggaaagcaggaacgcagatcgagaacatcgaggaggacttccgggatggg
ctgaaactcatgctgctgctggaggtcatctcaggcgaacgcttggccaaaccagaaaga
ggcaagatgagagtccacaagatctccaacgttaacaaagcactcgacttcatcgccagc
aaaggagtgaagctggtgtctatcggcgcagaggagattgtagatggcaacgctaagatg
accctgggaatgatctggaccataatcctccgcttcgccatccaagacatttctgtggaa
gagacatctgccaaagagggcctcctgttgtggtgccagaggaagactgcgccctacaag
aatgtcaacatccagaactttcacatcagctggaaagatggtttgggtttctgtgcgctc
attcatcgacaccgtccagagctcatcgactatggaaaactgcgcaaggacgatcccatg
accaacctgaacacagccttcgacgtggcagagaagtacctggacatccccaagatgttg
gacgcagaagacattgtgggcactgcccgtccggacgagaaggcgatcatgacctacgtc
tctagcttctaccacgccttctcaggcgcccagaaggcagagacagcggccaacaggatc
tgcaaggtgctggctgtcaaccaagagaatgagcagctgatggaggactatgagaagctg
gccagcgatctgctggagtggatccgtcgcaccatcccctggctggagaaccgcatgccg
gagaacaccatgcaggccatgcagcagaagctggaggatttcagagattaccgccgcctc
cacaagccgcccaaagtgcaggagaagtgccagctggagatcaacttcaacaccctgcag
accaagctgaggctcagcaacaggcccgccttcatgccctcggaggggaagatggtctcg
gacattaacaatgcatggggaaacctggagggagcagagaagggctatgaagagtggctc
ctcaatgagattcgcaggctggaaagactcgaccacctggcggagaaattccgccagaaa
gcagccatccatgaagcctggactgaaggtaaggaagagatgctgcagaagcgtgactat
gagacggcctctctgtcagagatcaaggccctgctgaagaaacacgaggcctttgagagc
gacctggctgcacatcaggaccgtgtggagcagatcgctgccatcgcacaggagttaaat
gagctggactactacgactcccccagtgtaaacgctcgctgccagcggatctgtgaccag
tgggacaccctgggagctctgacccagaaacgcagcgaggctttgcagagaactgagaag
ctgcttgaaaccatcgaccagctgtaccttgagtttgccaaaagggcggctccgttcaac
aactggatggagggcgccatggaggacctgcaggacacctttatcgtccacaccatcgaa
gaaatccagggattaagcacagcccacgagcagttcaaagccacgcttccagaggccgac
aaagagcgccaggccatcctgggcatccacaatgagattgccaagattgtgcagacctat
catgtgaatatcgccggcaccaacccgtacactaccatcaacccacaggagatcaatgcc
aaatgggacaaggtcagacagctggtgcctcagcgcgaccaggctctgattgaggagcac
gcccggcagcagaacaacgagcgtctgcgccgacagtttgccaaccaggccaatgtcatc
gggccctggatccagaccaagatggaggaaatcggccgcatctcaatcgagatgcacggc
accctggaggaccagttgacacacctacgccagtacgagaagagcatcgtcaactacaag
ccaaagatcgaccagctggagggagaccaccagctcattcaggaagctctcatcttcgac
aacaagcacaccaactacaccatggagcacatccgcgtgggttgggagcagctactcacc
accatcgctcgtaccatcaacgaaatcgagaaccagatcttgacgcgagacgccaagggc
atcagccaggagcagctgaacgagttccgggcttccttcaaccacttcgacagggaccac
tcgggcactctgggcgcggaggagttcaaggcctgcctgatcagcctgggcttcgatatc
gccaacgatgcacagggtgagaacgagttctcccgcatcatgagcatagtggatccaaac
cggatgggcattgtcaccttccaggccttcatcgacttcatgtcccgcgagacggccgac
acagacactgccgaccaagtcatggcctccttcaaagtcctggcaggagacaagaactac
attttagccgacgagctgcgccgggagctgcctccagaccaggccgagtactgcatagcc
cgcatggccccctacaccggccccgacggcgtgcccggagccctcgactacatgtccttc
tctacggctctgtacggagagagcgacctctga

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