Epinephelus fuscoguttatus (brown-marbled grouper): 125900829
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Entry
125900829 CDS
T08419
Symbol
alms1
Name
(RefSeq) platelet binding protein GspB
KO
K16741
alstrom syndrome protein 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
efo03036
]
125900829 (alms1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
efo03037
]
125900829 (alms1)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
125900829 (alms1)
Cilium and associated proteins [BR:
efo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125900829 (alms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
125900829
NCBI-ProteinID:
XP_049452030
LinkDB
All DBs
Position
LG14:2489356..2512784
Genome browser
AA seq
2288 aa
AA seq
DB search
MEPPQRAAASPQSPADEDVSPSVGQTSTNQLEAQSHSDANQDQRQPRLETDCRELQQPLG
RSFQPEFQDSNLSPALSLLPGAGLNFTDYSLFQQSDNEFVPLRAYPDISLASERFHSASQ
DRTTQASEQDSLSQHPLAQVTRLSEEGVSSCCSLSQHSLSLTDKHRQEETIHSPLTDKQR
VPGSRENVSKTLTDPSNKSAGEAAENETFFLSKDVPAQRLLELLQKDIGMPSSSSSAVSS
ASETSVKAAAVSQSLEVTKPHTDQSMFRREGPPGEASLPQQQTQQPDRDSHSNQSRSLSS
EVCNITTGPRSTKPDDSSEALHRELLSEVEKSSSREAAEFENQQLKSSTPPGQSLTPHPT
ATFEGKPSVTRTNPGGVPWTGPFSVGVLRGHREQDLWSSGNQTGIDGSYLGFLPQSQSTP
GAFKAPPKSSVKAKLGQLSAIESNKENSYQSGISPQPAAPVADVHLPDIVNQSQEEATSA
KVQSLPSLNFMQKVDAWRTNQSSGKTSLFDSLALQGFSGISPKKKAYDAVSDSLNRILSQ
QAMSLQQPPVSIAANQDVTQSSSTAPSGSSSTRRGEAVGSAPSDKDNTGSAARPSTSSFG
RSQSHSSLSTVVMSGQKNQPVERPAEEENSQTQDDVRHQPAATVQPAARVSLSQFSDVSL
DRDLTLSSSQGSYSSGVKLGTSVGASSAVSLEVDNYAPYWTSKLSTPPPVPRPRELNIEE
RIPLYLHNLGIEQSPSTILTPFVPRGPIREPEFSPTDLCTIKGSVGTPTKSTQPSEGDSP
HKGEFSRSSILSVDSSMSIPLSLDSLGPGVSVPERTTRASPFSDTDDAQSERRLARSSPP
NEDLYPSTLQTTQQEHMNSSLTSSQNTIQLGDRFDSEPSVDTKARCGDRDSDSTLQTSRS
LERSAADSVVSSKALLEIRKLLSQAENMVSTGSSGGSSPSPAAPRLLSDEDIFLSLRKKT
SRLQDSSFSSFSATVDPRTGSSPLWVRSSSDSMLTSERLRETSIGRESVTSPGQPHYPST
QALITTGAYIRPQDSSVDRGAGSSLVLSQSARRAEPEGCSAAPPDNTVPPQPPVSKPLPG
LSAQQIPSTPADSAGVSDNDRSPAQSTSSSPIQEDSDQGVMSDGSSESSLAVRVAKLLQS
ESPATMVSSTPSVTDQEESKAREWIKLKISGQQCEPLELDKEDRKRIEEIKRELLLRNPL
KSQGSTDTESSAASSVRVHKEQVQLQPTDTVTAFHDSNNQPSQPLQRLSSHIPSDLSTDS
SVQLQNPPRPDLEAQIREIAAREGVTLARTNPQALTSITIATRRRSTSPSPSTSPAPPIS
PAPGLLHLAELSTGAPEQPKANRQLPSTIDEEDEATRDPASVFEPSSSLSIGNQNLTSTR
SQRRQDAVGGQFEELSKDLGGEDVKAKEDNTQSVRRDGEISVHDSSVSGAVHKAEQTTGS
SPTRTGHVSHVHLTLSPKATDVFPSHADAVTGLPRKEFVPLRHSSAATSPDEGVGLSSPP
EWYDTRDPIRLRRPERADTSTLFKTTVPRDRMISTSTQSFTPRHRVVVSPRPSTTEAPAV
PVLLPYKPRGSEEVFYIPQTEADVTSNDPSDTTMESSHTGSDDAVPPRFSSEVLGHQDAG
LDRGVTIRHSEGIYSKRLKTATFKMNEPKHGGAPVSADGTSQTTRVTGTPKTSSHESAAV
TRVPSSSSRGASKRDQGTSPVHFPSNDHPEPSRVRFQPVHVDVDYDMASHHLDQSSALQT
GEERDEVRRDSDLCHPAAQQSSSTLDQLWERFCDQWSLEESRPTSDREASLLQRLERLSR
LIRSTRGANMSERRGGDAPERDGKKGSGEVKRSGGGEARGGRKVEGKPPVLRQASTQRLQ
ETSQPADEDRRDSFTSCFSQDSSQSPHLCPADRDESETLSSMSGSMSTVDTARLVRAFGA
HRVQILKTSSSLSKLYSTINKQKEGRERRRGRYKEPPHIIALSETTVTDESTVTADSASS
TSTYTLPSHRGPSRTLAAKKAVKLVSRGIQAGDLELVSNGTRRHTRDVGTTFPSPGEART
SRQVSSSSSSLDRGRGGRKSPSKSQDSQKQRKSKRTPPKTYPEGVSWFIAADELKSEARK
ENRPEEEESTWRPSTAWFEPYSQTHPWREPLRQRQVHQDRNQPQPEPDVDPRTKTPSSGL
TRISLQDALLMRRPEFISESRQRVKRLALQVEERRLQADFSRERDELFSRPGGPGRLPKP
AGTALLRRAVPRKEMIQRSKQIYENLPEVQRRREEERRKAEYRSYRLNAQLYNKRITNRV
LGRRTAWH
NT seq
6867 nt
NT seq
+upstream
nt +downstream
nt
atggagcctccgcagcgggcggcagcgtctcctcagtcaccagcagatgaagatgtgagt
ccgtctgttggacaaacatccacaaaccaacttgaagctcaaagtcacagtgatgcgaat
caggaccagaggcagcccaggctggaaacagattgcagggagcttcagcagccgttggga
cgctcttttcaaccagaatttcaggacagtaacctgtctccagccctctccctgcttcct
ggagcgggactcaacttcactgattattctttattccaacaaagtgacaatgaatttgtc
cctttaagggcatatccagacatttccctggcatcagagaggtttcactctgcatcccag
gatcgcaccactcaggcctcagagcaggactcactgtcccagcatcctttggctcaggtg
accagactgtctgaagaaggagtgagcagctgctgttcactgtcccagcacagtttgtct
ctaacagataagcacagacaagaggaaactattcactcaccactgactgacaaacagaga
gtaccagggagcagagagaacgtctccaagacactgactgacccgtcaaacaagtcagca
ggagaagctgctgaaaatgagacgttcttcctgagtaaggacgttcctgctcagcgtctt
ctggagctccttcagaaagatatcggtatgccaagcagcagcagcagtgccgtttcttct
gcttctgaaacctctgtgaaggcagctgcagtgtctcaaagccttgaagttaccaaacca
cacactgaccaaagtatgtttagaagagagggtcctccaggtgaagcttctcttccccag
cagcagacacaacaacctgacagagattcacactctaaccaatcacgatcattgtcgtct
gaggtctgtaacatcaccacggggcctcgcagcacgaaacctgatgacagtagtgaagcg
ttacacagagagctgctgtctgaggtagagaagagcagcagccgtgaagcagctgaattt
gaaaaccagcagctgaaaagctccacaccacctggtcagtccctcacaccgcatcccaca
gcaacgtttgaaggcaagcccagtgtgaccagaacaaatccaggtggggtgccgtggaca
ggaccattttcagtaggtgtcttgcggggtcacagagaacaggacctttggtcctcaggg
aaccaaacagggatcgatgggtcctacctgggtttccttccacagtctcagtccactcct
ggggcgtttaaggccccgcccaagtccagcgtcaaggctaaattagggcaactttctgcc
atagaatccaataaagagaactcatatcagtcagggatctctccacagccagctgctcct
gtggctgatgtccatctcccagacatagtaaatcagagccaagaggaagctacctctgca
aaagtccagtctctcccaagtctcaactttatgcagaaagtagacgcctggaggacaaat
caaagttcaggaaagacatcactatttgatagtttagcactgcagggattctctggcatc
tctcccaaaaagaaagcttacgatgcagtatctgactccctgaatcgcatcctgagtcag
caggcgatgagtttacaacagcctcctgtttcaattgctgccaaccaggatgtcacacag
agctcctccacggctccctcgggctcttcttctacaagaagaggggaggcagtgggcagc
gctcccagtgacaaagacaacactggttctgcagcaagaccctccacctcgtccttcggc
aggtcacagtcccactcctccctcagtaccgtggtcatgtcaggtcagaaaaatcagcca
gtggagagacctgcagaagaagagaacagtcagactcaggacgatgtccgtcaccagcca
gctgccacagttcaacccgcggctcgcgtgagcctcagtcagttcagtgacgtgtcgctt
gatcgagatttgacactctcaagttcccaaggtagttacagcagtggagttaaattagga
acttcggtcggagcgtcttctgctgtcagtctagaggtcgataactacgctccttactgg
acgtccaaactatcaacaccacctcctgtgcccaggccgcgagagctcaacattgaagaa
cgaattccgttgtatctccataacctgggtattgaacagtctccctcaacaatcttgact
ccatttgtgcccagagggccaatcagagagcctgaattctctcccactgatctctgtaca
attaaaggatctgttggaaccccgaccaagagcacgcagccctctgaaggtgacagtccc
cataaaggagagttttccaggtccagcattctgtcagtggactccagtatgtccatacca
ctgagcctggacagtctcggtccaggtgtatctgtcccagagcggaccacacgggcttct
cccttttcagacacagatgatgcccagagtgaacgcagactggcacgctcctccccgccc
aatgaagacttgtatccctccacactgcagaccacccagcaggagcacatgaacagcagc
ttaaccagcagccagaacaccatccagctcggggacaggtttgactctgagccctcggta
gatactaaggctaggtgtggggacagagactcagactcaaccttacaaacgagccgtagt
ttggagcgaagtgcagcagattctgtcgttagctccaaagctttgttggagatccgtaaa
cttctctctcaggcggagaacatggtgtctactgggtcttcagggggctcctcaccctcc
cctgctgcgcctcgtctactctctgatgaggacatcttcctctcactgaggaagaaaacc
agcaggctccaggactcctcgttctcctccttctctgcaactgtggatcccaggactgga
tcctccccgctgtgggtgaggtcctcgtctgactccatgttgacctcagagagacttaga
gaaacctctattggtcgagagagtgtgacctcaccagggcagcctcattatccatccaca
caagctctcattaccacaggtgcatacattaggccacaggatagctctgttgatagaggt
gcagggtcgtccctcgtcctctcccagtcagcccgacgtgcagaacctgagggctgcagc
gctgctcctcctgataacacagtcccaccacagccaccagtcagcaagcctctaccaggt
ttgagtgcacaacagatcccctctactcctgcagactcagcaggtgtctcagacaacgac
agaagtcctgcacagagcacatcctcctcacccatccaagaggacagtgatcagggcgtg
atgagtgacgggagcagtgagagctcgctggcagtcagagtggccaagttactgcagagt
gaatctccggccactatggtgtccagtacacccagcgtcactgaccaagaggagagcaaa
gccagagagtggatcaaactgaagatatcaggacagcagtgtgagccgctggagttggac
aaagaagacaggaagcggattgaagagatcaagagagagctgctgttgagaaaccctctg
aagagtcaggggagcacagatacagagagcagtgcagcatccagcgtcagagtccacaag
gagcaggttcagcttcagccaacggacacagtcactgcctttcatgactccaacaaccag
ccgtcccagccgctgcagcgcctcagctctcacatcccctcagatctctccactgactcc
agtgtgcagcttcagaaccctcctcgtccagatctagaggctcagatacgtgagatcgct
gccagagaaggggtaaccctcgctcggacaaaccctcaggccctcacgtctatcaccatc
gccacacgcaggcgctccacctccccctctccctccacgtctcctgcacctcccatcagt
ccagcacctgggctgctccacctggctgagctctccacaggagcacctgaacaacctaaa
gctaacaggcagcttccctcaaccatagatgaagaggatgaggcaaccagagacccggcg
tcagtgtttgaaccaagcagtagtctcagtatcggaaaccaaaacttgacttctacgagg
agtcagaggaggcaggacgctgtaggaggccagtttgaagagctgtcaaaggatttaggt
ggagaggatgtgaaagctaaagaggacaacacacagtctgtaaggcgagatggcgagata
tctgtccacgacagttctgtttctggtgctgttcacaaagctgaacagaccacaggttcg
tccccgaccaggacaggtcacgtctcacatgtccacctcacgctgtcccccaaagccact
gacgtctttcccagtcacgctgatgctgtaacggggctgccacgtaaagaattcgtcccc
ctcagacactcctctgctgccaccagcccggacgaaggcgtcgggttgtccagtccgcca
gagtggtacgacaccagagatccaataagactgcggcggcctgaaagagccgacacctcc
acgcttttcaaaaccaccgtgcctcgggacaggatgatctccacgtccacgcagtctttc
acaccacgtcacagagttgttgtgtcaccaagaccctcaaccactgaagcaccagcagtg
cctgtcctgttgccttacaaaccacgaggcagtgaggaggtcttctacatccctcagaca
gaagctgacgtcacctccaacgacccctctgacaccaccatggagagctcccacacaggc
tcagacgacgccgtccccccacgcttcagcagcgaggtcctcgggcaccaagatgctggg
ttggaccgaggcgtcaccatcagacactcagaggggatctacagcaagaggttaaaaaca
gccacctttaaaatgaacgagcccaaacacggaggtgctcctgtatcagcagatggaacc
tcacaaacaacacgtgttactggaactccaaaaacatcttctcatgaatcagctgccgtc
accagagtgccttcatccagcagccgaggagcctccaagagggaccagggcaccagccca
gtccacttccccagtaacgatcatccagagccgagccgtgtgagatttcagccagttcat
gtggatgtggactacgacatggcgagccatcacctggaccaaagctctgctcttcagaca
ggagaggagcgagacgaggtgaggagagactctgacctctgtcaccccgccgcccagcag
agcagcagcactctggaccagctgtgggagcggttctgtgatcagtggagcctggaggag
tccagaccgaccagcgacagagaggcgtcgctgctgcagcggctggaacgcctgtcccgt
cttattcggagcacaagaggtgctaacatgtcagagaggaggggaggagatgctccagag
agagacggaaagaagggcagtggagaggtgaagaggagcggaggtggtgaagccagagga
ggaagaaaggttgaaggtaaacctcccgtccttcgtcaggcctccacacagaggctgcag
gaaacttctcaacctgcagacgaggaccgccgagactccttcacctcctgcttctcccag
gactcctctcagagtccacacctctgtcctgcagaccgggacgagtcagagaccctgtcc
tccatgtctggctccatgtccaccgtggacacagcgcggctggtccgagccttcggcgcc
cacagggtccagatcctgaaaacaagctccagcctcagtaaactgtacagcaccatcaac
aagcagaaggaagggagggagcggaggagaggaagatacaaagagccgcctcacatcatc
gcgctgtcagagaccaccgtcacagatgagtccacggttactgctgattctgcatcatca
accagcacttacacgctcccgtcacaccgcggcccctccaggacgctggcagctaagaag
gccgttaaactggtcagcagaggcatccaggcaggtgacctggaactcgtcagtaacggg
actcgacgacacactagagacgttggaaccaccttcccttcacctggtgaggccagaact
tccaggcaggtctcatcttcctcatccagtttggacagaggaagaggagggaggaagagc
ccatctaagagccaggactcacaaaaacagaggaagagcaagaggaccccaccaaagacc
taccctgaaggtgtgtcatggttcattgctgctgacgagctgaagtcagaggcgaggaag
gagaaccggccggaggaagaggagtcgacctggaggccgagcaccgcctggtttgaaccg
tacagccaaacccatccgtggagagaaccactcagacagagacaagtccaccaagacaga
aaccaacctcagcctgaacctgatgtagatccaagaaccaaaacgccgtcctctggtctg
acacggatctctctacaggacgctctgctgatgcgtcgtccagagttcatctctgagtcg
aggcagagggtgaagcgtctggctctgcaggtggaggagaggaggctccaggctgatttc
agcagagagcgcgatgaactgttcagccggcctggaggaccggggaggctgccgaagcct
gcaggcaccgctctgctcaggagagctgttcccaggaaggagatgatccagagatccaaa
cagatttatgagaatcttccggaggtgcagaggaggagagaggaggaaagaaggaaagca
gagtatcgatcttaccgactgaacgctcaactctacaacaagcggatcactaaccgtgtc
ctgggcaggagaacagcgtggcactga
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integrated database retrieval system
