Epinephelus fuscoguttatus (brown-marbled grouper): 125900837
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Entry
125900837 CDS
T08419
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125900837
Transcription factors [BR:
efo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125900837
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
125900837
NCBI-ProteinID:
XP_049452044
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All DBs
Position
LG14:3188841..3678712
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AA seq
1070 aa
AA seq
DB search
MIRIFPDFSVQVTASGAGGPGGGGGGGGGGMVTGPQVGRVPVPIPGATNGTPQSVQGITA
YQQSDPYWERPANAGSCSAARPKTLHLAGQQHTSSPWLQALRKEKSRDAARSRRGKENFE
FYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKAI
GTQRRRSPSAIASEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELT
GSSVFDYIHPGDHVEMAEQLGMKLPPGRGMSLSQGAVNEDGASSASSSSHSETPEPVESS
SPSLLAPDNSLERSFFIRMKSTLTKRGVHIKSSGYKVIHVTGRLRIRMALTHSRSVPNQI
MGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLKIVYCENRISDYMDLTPVDIVGKRCYQ
FIHAEDVEGIRQCHLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATISINAKNANEKNVIW
VNYVLSNPEYKDTPMDIAQLPNLPEKTSESSETSDSDSESKENSDNENAKSEGKPGHQSE
REDPETDSKRQQQPGQPHCSSEQEMKRQEEGDSSSNPESQDSDDSLEPSDGEGEEQEEAR
GGGGGGGGGGGGGGGRLGRLAGLGGLGGLGAIGGLGNLSGLHIKVEHYGEGEEVQLHNSQ
TSSSEEEEEEEDDDDEEEEDGGVQDCESANAGNKLQKRRKRRKVQKWDGSRSRRLRLSST
TPSPVAMGDTTPLVDPSQATPANSSHLLTSADSPNSANATSSVLKIKTEMAEPINFDNDS
SIWNFPPNREISRNESPYSMTSKPAAPGNHETFPSPQGGSLQVAIPDSVLTPPGTEGGAG
GVRKPPYNGSSAPSSASSAASLAPPSSASSADPLSPPLSASPRDKQQGTPTTSSSTSSSS
SSSSSTSSSSLLYSGDLEALQRLQAGNVVLPLVHRVTGTLASTSTTAPRVYTTGTIRYAP
ADVTLAMAQGNLLPNAAMNFVDSSGFGLDPKTPMEMLYHHVHRLNMSAAAAAGPFVGSPA
ATGGNNALGGQMTTAANVFTTAEGLFSTLPFPVYSNGIHTTQTTLERKED
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagcgtccaggtgacggcttcgggagccggaggaccc
ggtggcggaggaggcggcggaggcggtgggatggtgacgggaccccaggtgggtcgggtg
cctgtgccgatccccggagccacgaacgggaccccgcagagcgtgcaggggatcaccgcc
taccagcaaagtgacccctactgggagcggccggctaatgcaggcagctgctccgccgcc
cggcccaagacccttcacctggccggccagcagcatacctcctcaccatggctgcaggct
ctgaggaaggagaagtcacgggacgcggcgcgatcgcggcggggaaaggagaactttgag
ttttacgaactggccaagatgctgccgctgccgggcgccatcaccagccagctggacaag
gcctccatcatccggctcaccatcagctacctgaagatgagggacttcgccaaccaggga
gacccgccgtggaacctgcgcatggagggaccaccgcccaacacctctgtcaaagctatc
ggcacccagcgaaggaggagtcccagcgccattgcctcggagatcttcgaacctcacctg
ggcagccacattttacagtctctggacgggtttgtatttgcactaaacaaggagggacgc
ttcctctacatctctgagaccgtctccatctacctgggactgtcgcaggtggagctgacc
ggcagcagcgtcttcgactacatccaccccggcgatcacgtggagatggcagagcagctc
ggcatgaagctccctccgggccgagggatgtcgctgtcccagggagccgtcaacgaagat
ggggcgtcctcggcttcttcgtcgtcgcactctgagacgcccgaaccagtggagtccagc
agtcccagtcttctggctcctgataacagtctggaacgatccttcttcatcaggatgaag
tcgacgctcacgaagagaggagtgcacatcaagtcctcaggatataaggtgatccacgtc
acggggcgtctgcgcatcaggatggctttgacgcacagccgctcggtgcccaatcagatc
atgggaatggtggtggtggctcacgccctcccgccgccgaccatcaacgaagttcgcatc
gactgtcaaatgttcgtcacccgagtcaacatggacctcaagatcgtctactgtgagaac
aggatcagcgactacatggacctgacgccagtggacatcgtggggaagaggtgttaccag
ttcattcatgctgaagacgtggagggaatcagacagtgtcacctggacttgatgaataag
ggtcagtgtgtgacgaagtattaccggtggatccagaagaacggcggttacatctggatc
cagtccagcgctaccatctccatcaacgccaagaacgccaacgagaagaacgtcatctgg
gtcaactatgtcctcagtaatccagagtataaagacacgcccatggacatcgcccagctg
cccaacctgcctgagaaaacctctgagtcatctgaaacctcagactctgactctgagtcc
aaagaaaactctgacaatgagaacgccaagtccgaggggaagccaggccaccaatcagaa
cgtgaggacccagagacagacagcaagcgtcagcagcaacccggccaaccacattgctcc
tctgaacaggaaatgaagcgtcaggaggaaggagacagctcaagtaaccccgagagccag
gacagtgatgacagtctggaaccttcagatggagagggggaggaacaggaggaggcaagg
ggaggaggtggaggaggagggggcggaggtggaggtggaggaggaaggttggggaggtta
gcaggactgggagggttggggggactgggcgccatcggaggactgggtaatctgagtggg
cttcatatcaaagtagagcactatggagagggggaagaagtacagctgcacaactcgcaa
acttcttcatcagaggaggaggaagaagaggaggatgatgatgacgaagaggaagaggac
ggtggcgtgcaggattgtgagagcgccaatgctggaaacaagctccagaagaggcggaag
agaaggaaagtgcagaaatgggacggatcccgaagtaggaggctccgtctctcctcaacc
acgcccagccctgtcgccatgggagataccacaccgctggttgaccccagccaggccacg
cctgccaactcctcccacctcctcacctccgctgactccccaaacagtgcaaatgcgaca
tcctcggtcctaaaaatcaagacggagatggcagagccaatcaacttcgacaacgacagc
agcatctggaacttcccgcccaacagagagatttccagaaacgagtccccgtacagcatg
acctccaagcccgccgctccggggaaccacgagaccttcccctcaccccagggaggctct
ctccaggtagccattcccgactcggtcctcacccctcctggaactgagggaggagcagga
ggagtgaggaagcctccttacaatggtagctctgcgccatcctctgcttccagcgctgcc
agtttagcacctccctccagcgcctcctctgcagaccccctgtcccctcctctctccgcc
tctccgcgggacaagcaacaaggcactcccaccacctcctcttctacttcctcatcctcg
tcctcgtcctcatcaacctcttcctcctcgctgctgtactctggtgaccttgaggcacta
cagcgtctgcaggctggtaacgtggtgctccctttggtccaccgggtcacagggactctg
gcctctaccagcacgacagctccacgggtctacaccaccggcaccatcaggtacgcaccg
gcagacgtcaccctggccatggcccaaggcaatctcctccccaatgctgccatgaacttt
gtcgacagctcggggttcggtctggaccccaagacgcccatggagatgctgtaccaccac
gtccacaggctcaacatgtcagcagcggcagccgccggcccatttgtcggatctccggca
gccacgggtgggaacaacgccctgggaggccagatgacgaccgcagccaacgttttcacc
acagcggagggacttttctcgacgctaccgttcccggtgtacagcaacgggatccacacc
acgcagacgactctggagaggaaggaggattaa
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