Epinephelus fuscoguttatus (brown-marbled grouper): 125900924
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Entry
125900924 CDS
T08419
Symbol
apoba
Name
(RefSeq) apolipoprotein B-100 isoform X1
KO
K14462
apolipoprotein B
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
125900924 (apoba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
efo04147
]
125900924 (apoba)
00536 Glycosaminoglycan binding proteins [BR:
efo00536
]
125900924 (apoba)
Exosome [BR:
efo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
125900924 (apoba)
Glycosaminoglycan binding proteins [BR:
efo00536
]
Heparan sulfate / Heparin
Others
125900924 (apoba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FliH
ApoLp-III
Motif
Other DBs
NCBI-GeneID:
125900924
NCBI-ProteinID:
XP_049452171
LinkDB
All DBs
Position
LG14:complement(42878986..42890308)
Genome browser
AA seq
3014 aa
AA seq
DB search
MMSGRDNDNLKYLLNSSFSHSLVDTSISVLETLRVTNKLNARANYKIEASSPVGLQAFLY
YSAQSTSTLDSDEVSGDGTVDGSLKIGSFYTNTSYTHNYNVHPLDREGRGESTLHFDSPF
IKVHNMIYGTYTNSVLNIVSKTNTQDDALKHLAELKYKDAQLTLKLNAIATAMGNSLSNK
VELGVSSHMAILRIESQADDDIHRAYSLITGSLDSDGLKVNSDGSLTFDTGRGLHKASVM
ADRHGLTTSGTNSFQCSPITVENIFHGAIDNNGASLSSRTKAMAEESRGELNIEGKITAA
EASLNGVLKANAYDTATRNNMDIVLNRRALTFTSYSIGTLKQMNTENSHTLTLTLWTLAL
QSKTNNVICEDIYYKQDTKVNMKPFVMSFDMTNYLKFYDVTLNTEGHMKLEPVKVDLSGS
MKGSYGEEHNIKHIYELKYDDMAGTMKYRTFGNVMDAQLSHSCELEFAGLSSKSNCETRI
NSEALSFESTIRTMALPFSLTVDVLVNSDGEINIYGRHTGQLYSKLLIKTEPLAVAYSHD
SRVSVTHMLPNGNFSTNLDNKFDGLLTPSDQSLTWKVKSKLNNHAYNQDIGTYNNPEKIG
LELSGIMLTDIFSKMSEDKISDIQEFSMAGFLIYDKNSDCHIIYIPFIESFPVAFEQLKN
TFVQALESLQQFINSLDFNQLITDFRAKLDQLPMQVGDFMRVTDIENKVNQAKAKLDYLI
NEFAVTMDDFEVAMNNLRKNMENIVMNIATKISELILTVKDYVKTRHFADKITNILSQLG
NKLWELNEKYQIKQSLVKALDAIEDIIGQIDLQKLTEGNATWLQELDSKYGILGKIKDKL
SKMKHATENVDIHMFFQNIKDYLLSSDLIMYVEQLSYKTPSTEIAKVMESINDVIVSWID
EYEIPNKINTMYSYIRDLIVKYGLDDKFKELMDQVVILIEEFKIEETVQSMVDALKFLDF
EFVYDKIIQLLHSLKGQLRATEFMKSINDLNKQISSMLKSMKEFDYSAFIDETNKKFAEV
ANYINEQIKMYEIVQKIEAVRKFFREIQSTIFAYLDELKNTKVVDALKKLKNVIDNTFYN
DIKMKMQDILEDMRQRILDMDIRNEMYIYLKRASESYSNVTAYISTQFNQLIEKIREVAS
QYEFITQMQQTIDGVLDALKRAEIAVPTFTVPFTNLVIPAFTINLNKLQEIRIPAQISVP
EVTVLNSYKSPAFTIDFDEIKADIVAIIDDIREFEIQMPDPEVFFGDLKVVYFPKVPDLT
FTEISLSEIKFPVLSITKLNQKGFEITMLPIPEIKLPDVPSDICIPAFGKLHGEFRVNSP
QYTLATIGKIDNSTSTPKNPQFTATITSCAKSAIKPLEYTFEATAQLETPRMKKLLFTET
MKATHVAFSIDHEGSLTLTGSSTEAAVKTTTKATTQMYTADLVNKMTLTLKNGISATIDT
TYNHNLDILSIETSSQASIKQNVAAIMELGRITMTGETSGNGKWSIQDYSDEGTHNSNVK
LNIDVSTATLTFVGQTDCKTMKTKQILTAESVTLNHITVEARCETEVPFVKKSVMVLNGE
TDIGNLKVAVTASHNAEFTESLTGFIANSLEFMTHPFETVLDVKNKVNLKMFFPLKLTGK
VDLQHDYGVTLNSEKQHACWFALARFNQYKYNHNFTAENNEMDFLLHSSASGEANLDFLT
VPLSIPEIVVPYLKIKTPEIRDLSLWKNAGFETLLTTPQQSFDMNLKLHYYKNPDTHCFE
LHLEPIYSAINDNANIINAQFEQSRDIVVALLKDSYNQAKSQYIKHKIDTSNLPPRIFAV
PGYKIPIFNVKVSAFRAEMPAFSYFFPKEFSTPSFKIPALGFSVPSYTLVLPSLELPIIY
VPEMLSEIKLPTFTLPAIQNNILIPAMGNITCDFSFKSTVISLSTNAGLYNVTDIVAQLS
ASSTSIFEILNGKIDGTTSLTKKRGIKLSASVSLEHNNVEANHECAVSLTEMSVEVSVAN
NAKINLPSLNLELNQEFTGNTKTKPNAAFKKKIKYMFIIPLIESGGKGNLDMNWALEVLS
SCVSLETSFQGKSDILIMDSFNLAGDVENEASFCLNANRLRSTVRTALNSNIDKQEIKKQ
NSNNNILQFNVNKNLALEVSLRRMFATVDYTSNNNVNFASFNTNGKHIVKGELDFVPLTT
FKTTLNIDVSQPSSLGHAGLIQSINLAINSEKQSFTWSSVEQLASLMHACDLLLSNDDSE
ARMDLTGSVEGHLAFVKLVKLPVYQKTLWDVLKCGQVTNIDNLQFLNISSSIVYTKTVGG
QKYTMPFKLFENSITFSIPEISITVPSWVKDIPHSIRNIDLRFENPDVPNYLTFPPSISV
PAFDVPFTNLHLEPFTIDPQNLNIPNVITTAAFEIMLPGLPIMSVPSYNIDTTYLEGRVS
FLSFKMPQYEITVSSLTLPKSFIIGKHTIGLNEITNHILNFELPTIIIPEQKIEIPEFAL
HLPSSVCIPAFGTLSVTMKVSSPIYNVSTSANLEKNDSSFLTSLHSICTSTMIFLEYDLF
ASSTLEFDNGLINVNGKCNLIHSDVNVNWQHVSAQNLRESHHSINVDIISQTFADVSFHF
AYHKDGITVSMSCPSSGFLGMQFQQRSPSQLYGKLFGRYLSTPERDTDVFTAKVTLRNST
KLILQTSWNWDFLHDVIEGTKDRIPVMTNTVLKFINKYHTIHFGFDLNRGGMKLKNTVSN
VIERAYHEVPLSFNTLQNSVKHVSDQVKDMYRTASDGLMSMSVQDVIDRLAHEARQVLKH
IGDKIYVLFDAVTQFLSDTKFTLPGSEEKLSGLEMFQRACQSVSKATDRAVQRFASLAEK
TSRYIRGMTFTVPGTDVVVNGNKIMDKLMSSVRSAFDQLRHSVSRGFSWLHKTFNGLLQV
ITENAENFITYLQNENVEIASQVDAISAKVLQSSNQHTNEAKRYVADYKDLTKLRIQEAY
NALSMVQVNNDAKEFISIFQSDLYRGLNETVDLLRRTSLCTAPYIRVSSERLDFEIPLPF
LWKSFSEWPMQSSP
NT seq
9045 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaggaagagacaacgacaatctcaagtatcttctgaatagttccttcagccat
agcctcgttgacacaagtatcagtgtcttagaaacattaagggtaacgaataaattaaat
gcaagagctaactataagattgaagcctctagtccagtaggcctacaagcctttctctac
tattctgctcagtcaacctcaactctagattcagatgaagtctcgggagatggcactgtg
gacggatcacttaaaattggttcattctacaccaacacctcctacacccacaactacaat
gtgcatccactagatagagaaggaagaggagagtccaccctacattttgactcaccattc
atcaaagttcacaacatgatctatggaacctacacaaactctgtgttgaacattgtttcc
aaaaccaatacccaggatgatgccctcaagcatttagcagagctcaaatataaagatgca
caactgactctgaagcttaatgctattgccactgccatgggcaattcacttagtaacaag
gttgagcttggtgtgtccagtcacatggccatcctcagaattgagtcacaggcagatgat
gacatacatagggcatactcacttataacaggatccctggattcagatgggcttaaggta
aactctgacggttccctcacctttgacacaggtcgtggattacacaaagcttctgttatg
gctgacagacatggtctgaccacaagtggaactaacagctttcagtgcagccctatcaca
gtagagaatatcttccatggcgctatagacaacaatggagcctccctgtcctccaggaca
aaagcaatggctgaggagagcagaggagagctgaacattgagggtaaaatcacagctgca
gaagcttctttgaatggtgttctcaaggccaatgcatatgatacagccacaagaaacaac
atggatattgttctaaaccgaagggctctgacctttactagctatagcattggaacattg
aagcagatgaatacagaaaatagccacacgctgacgctcactctgtggaccctagccctt
cagtccaagactaacaacgttatctgtgaagatatttactataagcaagacaccaaggtt
aatatgaaaccatttgtaatgtcatttgatatgacaaattatctcaagttttatgatgtc
actttgaacactgaaggccacatgaagcttgagccagttaaggttgaccttagtggaagt
atgaagggatcttatggagaagaacacaacattaaacatatctatgaactcaagtatgat
gatatggctggcacaatgaaatacagaacgtttggaaatgtaatggatgcccagttaagt
cacagctgtgaacttgagtttgctggactttcctccaagtcaaactgtgagacacggata
aattctgaagctctatcttttgaaagtactattcgcaccatggcactgccttttagcctc
acggtcgatgtgcttgtcaacagtgatggtgaaattaatatatatgggaggcacactgga
cagctgtacagcaagttgttaattaaaacggagcccctagctgttgcatattcgcatgac
agtcgggtatcagttacacatatgcttccaaatgggaatttttccaccaatttagacaac
aaatttgatggcctcctgactccaagtgaccaatctctgacctggaaagtgaaatctaaa
ctaaacaatcatgcttacaaccaggacattggtacttacaataatcctgagaagattgga
cttgagttgtcaggaataatgttaaccgacattttcagcaaaatgagcgaagataagatt
tcagatatacaagaatttagtatggctggttttctcatttatgacaagaacagtgactgt
catatcatttacatcccattcattgagagctttcctgttgcttttgagcagctgaagaat
acatttgtgcaagccttagaatcacttcaacagttcatcaacagtttagactttaatcag
ctaatcacagactttagagccaagttggatcagctaccaatgcaagtgggtgacttcatg
cgagtcacagacatagagaacaaagtgaatcaagcaaaagcaaaactggattatttgatc
aatgaatttgctgtaacaatggatgactttgaggtcgcaatgaacaacttgagaaagaac
atggaaaatattgtcatgaacattgccaccaaaattagtgaactcatccttacagtcaaa
gactatgttaagaccagacactttgctgacaagataacaaatatactttcacaacttgga
aataagctttgggaattaaatgaaaagtatcagatcaagcagtcacttgtcaaagcactt
gatgccatcgaggatattatcggacagattgacttacagaagctcacagagggcaatgcc
acatggctgcaagaacttgattctaaatatggaatcttggggaaaatcaaagacaaactg
tccaaaatgaaacatgccactgagaacgtagacatccacatgtttttccaaaatataaag
gattaccttctctcaagtgatttgatcatgtatgttgagcagctatcatataaaaccccc
tctacggagatagcaaaagtgatggaatctataaatgatgttattgtcagctggattgat
gaatatgaaattcccaacaaaatcaatacaatgtattcttacattagggatctaattgta
aaatatggtcttgatgataaattcaaagaattaatggatcaggtagtgattctcattgag
gaattcaagattgaagagactgtgcagtcaatggtagatgctctgaaatttcttgacttt
gaatttgtgtatgataaaattatacaacttctacacagcctgaaaggacagctaagagca
actgagtttatgaaaagcattaatgacctcaataaacaaatttcctcaatgcttaagtca
atgaaggaatttgactacagtgcgttcattgatgagaccaacaagaagtttgctgaagtg
gcaaactatatcaatgagcagattaaaatgtatgagattgtgcaaaaaattgaggcagtt
aggaaatttttcagagagatccaaagtaccatctttgcatatttggatgaactcaaaaac
acaaaggttgttgacgctctaaagaagctgaaaaatgtgattgacaatacattttataat
gacatcaagatgaaaatgcaggacatccttgaggacatgcgtcaaagaatccttgacatg
gatatcagaaatgaaatgtacatttacctcaaaagagcaagtgaatcctacagcaatgtg
actgcctacatttctacacagtttaaccaactgattgagaagatcagagaagtggccagc
caatacgagttcattacacagatgcaacaaactatagatggagttctggatgcacttaaa
agagctgagattgcagttcccacttttactgtacctttcactaaccttgtcattccagca
tttacaatcaacctgaacaaactgcaggaaataagaatcccagctcaaatttcagtccct
gaggtcaccgtcctcaactcctacaaaagtcctgctttcaccatagactttgatgaaatc
aaagcagatatagttgcaatcatagatgacatcagagaatttgagattcaaatgcctgac
cctgaggtattctttggtgatcttaaagttgtctattttcctaaagtaccagatctcacc
ttcacagaaataagtctctcagaaatcaaatttccagtcctcagcattaccaaattaaat
cagaagggttttgaaatcacaatgcttccaattccagagataaaattacctgatgttccc
agtgacatttgtatcccagctttcggtaaactccatggagaatttagagtgaactcccca
cagtacactcttgcaactataggaaagattgacaactcaacatctacaccaaaaaaccca
cagtttactgccactattacttcttgtgccaaatcagccatcaagcccctcgaatacacc
tttgaagccactgctcagttggaaactcccagaatgaagaagttgctcttcacagaaaca
atgaaagctacgcatgtggccttctccattgatcacgaaggatccctaacactcaccggc
tcatctactgaggctgctgttaagactactaccaaggccacaacccaaatgtacacagca
gacttggtcaacaaaatgacacttacattaaagaatggaatctctgcaaccatagacaca
acctacaaccacaacttggacatcctatcaattgaaacttctagtcaggcatcaataaaa
cagaatgtagcagccatcatggaattaggcagaattactatgaccggtgaaacttctggt
aatggaaagtggtccattcaagactactctgatgaaggtacacacaatagcaatgtaaaa
ttaaacattgatgttagcactgccacgttaacttttgtaggacaaacagactgtaagact
atgaaaacaaagcaaatattgactgctgaatcagtgaccttaaaccacatcacagttgaa
gcaagatgtgaaaccgaagttccatttgtcaagaagagtgttatggttttaaatggagag
actgatattgggaacttgaaagttgcagtgacagcctctcataatgctgaattcactgaa
agtctgactggattcattgcaaactcgctggaattcatgacccatccatttgagactgta
cttgatgttaagaataaagtaaacttaaagatgttctttcccctgaaacttaccggtaag
gtggatctccagcatgattatggtgttacactaaattctgagaagcagcatgcttgttgg
tttgctttggcaagattcaaccagtacaagtataaccacaatttcactgcagaaaacaat
gaaatggacttcctcctccattcatcagcttctggagaggctaatttggactttttgact
gttcctctatctatcccagagatagttgtgccttatcttaaaattaaaacccctgagatc
agagacctctcactttggaaaaatgctggattcgaaaccttgcttaccactcctcaacag
tcatttgatatgaacctgaagcttcattactacaagaaccctgatacacattgctttgaa
ttacaccttgaaccaatttacagtgcaataaatgacaatgccaacatcatcaatgctcaa
tttgaacaaagtagagacatagtagttgcacttctaaaagattcttacaaccaagcaaag
tcacagtacatcaaacacaaaatagacacttctaatctgccccctaggatctttgctgtc
cctggatacaaaataccaatattcaatgttaaagtttctgctttcagggctgagatgcca
gcctttagctacttttttcccaaggagtttagtacaccaagctttaagattccagcactg
ggtttctctgtgccatcctatacccttgtgctaccgtctctggaattacccataatctat
gttccagaaatgttgagtgaaataaagctgcccactttcacacttccagccattcaaaac
aacattttgatcccagccatgggaaacatcacttgtgatttctccttcaaatctactgtg
atttccttaagtactaatgctggcctttacaatgtgactgacattgttgctcagttaagt
gcttcctcaacatctatctttgaaattttgaatggaaaaattgatggtaccaccagtttg
acaaagaagagaggaataaaactgtccgcctctgtttccctggagcataacaatgtggag
gcaaaccatgaatgtgctgtcagtctcaccgaaatgagcgtggaagtctctgtggccaac
aatgcaaaaatcaatctaccctctctcaatctagaattgaatcaggaattcacaggaaat
accaagaccaagccaaatgctgctttcaagaaaaaaataaaatacatgtttatcattcct
ctgattgagtctggaggcaaaggaaaccttgatatgaactgggcactggaagtactttct
tcctgtgtgtcactggagacctctttccaaggaaagtcagacatattgataatggacagt
tttaaccttgctggagatgtagaaaatgaggccagtttctgccttaatgccaatagactg
cgttcaactgtcaggactgccttaaactcaaacattgacaaacaggagataaaaaaacaa
aactcaaacaataacatcctccagtttaatgtgaataagaacttagctcttgaggtctcc
ttgcggcggatgtttgcaacagttgattacaccagcaataacaatgtaaattttgcatct
ttcaacacaaatggaaagcacattgttaaaggagaactagactttgttcctttaacaacc
tttaagactacattaaacattgatgtaagtcagccaagtagtttgggtcatgctggactc
attcagagcatcaaccttgccatcaactcagagaagcaatctttcacctggagtagtgtt
gaacagctggcatctctcatgcatgcttgtgatttactcctgtccaatgatgactctgaa
gcacgcatggacttgactggatcagtggaaggccacctagctttcgtgaagttagttaag
cttcctgtatatcagaagaccctctgggatgttctgaagtgtggtcaagtcacaaatata
gacaatttacaattccttaacatatcttccagcattgtttacacaaagacagtgggtggc
cagaagtatacaatgccatttaaactgtttgaaaacagcataacttttagcatacctgag
attagcattacagtgccttcttgggtaaaagacattcctcactctataaggaacatagac
ctgcgatttgaaaacccagatgtccctaattatcttacctttcccccttcaatctcagtt
ccagcatttgatgtgccatttaccaacttgcacctggaaccttttacaattgatcctcag
aaccttaacatccctaatgtgatcaccactgcagcctttgaaatcatgctgcctggcttg
ccaataatgtcagtacccagttacaatattgacacaacgtatctggaggggagagtatca
ttcctttcatttaagatgccacaatatgaaatcacagtctcatctttaacactaccaaaa
tcctttatcattggaaagcacactattggcctaaatgaaatcacaaaccatattttaaat
tttgaactaccaaccatcatcatcccagagcaaaagattgaaatccctgaatttgcctta
catctgccttcaagtgtatgtattccagcttttggaaccctcagtgtaacaatgaaggtt
tcctctcctatttataatgtgtcaacttctgccaacctggagaaaaacgactctagtttt
ttaacttcactacattccatctgtacttctaccatgatattcttggaatatgacctcttt
gccagttcaacccttgaatttgataatggactaatcaatgtaaatgggaagtgcaatttg
attcacagtgatgtaaatgtcaactggcaacatgtttcagcacaaaacctgagggagtct
catcatagtatcaatgttgacattatcagtcaaacatttgctgatgtgagctttcacttt
gcttaccacaaagacggcatcacggtatctatgtcttgtccatcatctggtttcctcgga
atgcagtttcagcagaggtctccatcacagttgtatggaaaactgtttggtcgctacctg
tctactcctgaaagggatactgatgttttcactgccaaagtcacactgagaaactctacg
aagttgattttacagacatcatggaattgggactttcttcatgatgtgattgagggtacc
aaggacaggattcctgttatgactaatactgtgctcaagttcattaacaagtatcacacc
attcactttggctttgatctcaaccgtggtggcatgaaactgaaaaacacagtttccaac
gtcatagagagagcctatcatgaagtgcctttgtcttttaacacactgcagaattcagtc
aaacacgtcagtgatcaagtaaaagacatgtacaggacagcatctgatggcttgatgtcc
atgagtgtgcaggatgttatagacaggttggctcacgaggcaagacaagtcttgaaacac
attggagacaagatttatgtcttgtttgatgcggtcacgcagtttttgagtgacacaaag
tttacattgcctggatctgaagaaaaactctctggcctagagatgttccagcgagcatgt
cagtctgtatcaaaagccactgacagggcagttcaaaggtttgccagccttgcagagaaa
acttctagatacattaggggaatgacgttcactgtacctggaactgatgttgttgtcaat
ggaaacaagatcatggataaactgatgtcttctgtcagatctgcatttgatcagctaaga
cattcagtgagcagggggttcagttggcttcacaaaacatttaatggcctcctccaggtg
attactgaaaatgcagagaatttcatcacataccttcaaaatgaaaatgttgaaatcgcc
tctcaagttgatgctatctctgcaaaggttctgcagtcctcaaaccaacatactaatgag
gccaagagatatgtggctgattataaagacctcaccaaactgaggattcaagaggcttat
aatgctttaagtatggtgcaggtaaataatgatgccaaggagtttatcagtatttttcag
tccgatctctacagagggcttaatgaaactgtagatctattgagaaggacatccctgtgc
acagcaccatacattagagtgagcagtgaaaggttggactttgaaattcctttacccttt
ctttggaagtcttttagcgaatggccaatgcaatccagtccgtga
DBGET
integrated database retrieval system
