KEGG   Epinephelus fuscoguttatus (brown-marbled grouper): 125901093
Entry
125901093         CDS       T08419                                 
Symbol
hltf
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
efo  Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:efo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:efo04121]
    125901093 (hltf)
   03400 DNA repair and recombination proteins [BR:efo03400]
    125901093 (hltf)
Enzymes [BR:efo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     125901093 (hltf)
Ubiquitin system [BR:efo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    125901093 (hltf)
DNA repair and recombination proteins [BR:efo03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    125901093 (hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 RING_XB3-XBAT31 zf-RING_5 DEAD zf-C3HC4_4 ResIII zf-ANAPC11 Prok-RING_4 HDA2-3 DUF5817 zf-rbx1 zf-Nse zf-RING_6 zf-RING_4
Other DBs
NCBI-GeneID: 125901093
NCBI-ProteinID: XP_049452443
LinkDB
Position
LG14:complement(13466055..13484248)
AA seq 1011 aa
MFSRRWRFGWDRFSEVDLFTDRHEADAETLSQAIRAAASEEPDADSVLFGHMKGTVVGLR
YYTGVVNRGEMVGLVRQPQNPYDRNAVMVANIYGNQVGHIKRELAAAMAHVMDNNLAKVE
GVVHSGTNNAFSMPVMLSFWGKEENKKTVIERMARHGYKLAPGAVSVTGTSQNSYSQGVF
AVPPQKGVTTLLTAEQENCLRSDDLFYEHGLTKMAALKKRKHTQSRKAQKGKRKKENTHK
LKNAFDNLFDDLMESKEGEKQEAESVGTPLLLHQRQALSWMCARENKSTLPPFWEKRGEL
YYNTVTCFSAKEIPERVRGGILADDMGLGKTLTTIALILTNFHNGKPLPVEKCEEQSSPI
KAKTKPKMASKLEGSSSTGDRAGVSDAAAGSQCSDLPQMEVICADSADVVEIVDKPDKSS
SKGKTKATKRKPSKEAPVLLDDLDFAAALGGGASDTGFKKKKTAKKATPTPSAESSIPAS
ADDLSARTTLIICPLSVISNWLDQFEQHVRSDVKLNVYLYYGPERNRSKTFLSSQDVVIT
TYNILSADFGNKSPLHGINWLRVVLDEGHIVRNPNAQMSKAVLELKAQRRWILSGTPIQN
GVKDLWMLLAFLRLKPFDVRDWWNRVIQRPVTQGVRAGLQNLQTLVKCITLRRTKNSELN
GRPLVSLPEKTVCVEQVELSQSERDEYELARNEGRKTIRRYVAEGSVLRNYADVLAILMR
LRQHCCHPDLLAKTSSDLGAAATPAELRERLIEKLRLVLASGSDEECSVCLDSVRLPVIT
HCAHVYCRPCIAQVISSQQETARCPLCRSEIKTSELVEFPQEEVEEETSANSKWRTSSKV
QALMGNLLRLRHEDSSIKCLVVSQFTRFLTILETPLREHGFSFLRLDGTMSQKKRTQVIQ
EFQSSAADSPSIMLLSLKAGGVGLNLTAASRVFLMDPAWNPATEDQCIDRCHRLGQTRKV
FVTKFIVKNSVEENMVKIQRQKQDLVEKAFGSSNAKRETSRIDDIKALMEL
NT seq 3036 nt   +upstreamnt  +downstreamnt
atgttttcccgcaggtggaggttcggctgggacaggttcagtgaggtggacctgttcaca
gaccgccatgaggccgatgcagagaccctttcccaggccatcagagctgcagcgtctgag
gagccggacgcagacagcgtgctgtttggacacatgaaaggcactgtggtcggcctcaga
tattatacaggggtggtgaatcgtggggaaatggttggtttagtgcgacagccccagaac
ccatacgaccgcaatgcagtgatggtcgccaacatttatggcaaccaagtgggtcacatc
aagcgggagctggcagcagctatggcccatgtcatggacaacaatttggccaaagtagag
ggggtggtacactctgggacgaataacgccttcagcatgccagtcatgctttccttctgg
gggaaggaagagaacaagaagacagtgatagaacgcatggcacgacacggttataaactg
gccccaggtgcagtcagtgtgacaggtacatcccagaattcttatagtcaaggagttttt
gcagtaccacctcaaaaaggagtgaccaccctactaactgcagagcaggaaaactgcttg
agatcagatgatctcttttacgagcatggccttaccaaaatggcagcattgaagaaaaga
aaacacacacaaagcaggaaagcacagaaaggaaagagaaaaaaagaaaacacccacaag
ctgaagaatgcgtttgacaacctctttgatgacctgatggagagtaaggaaggagagaaa
caagaagcagagtctgtgggcactcctctcctgcttcaccagaggcaggcgctgtcctgg
atgtgcgctcgagaaaacaaatctacgctgccacctttttgggagaagagaggtgagctc
tactacaacactgtcacgtgtttctctgccaaagagataccagagagagttcgtggggga
atactggcagatgacatggggctgggaaaaactctgacgaccatagcgctgattctcacc
aactttcacaatgggaagcctttgcctgtggagaaatgtgaggagcagtcttcacctatc
aaagccaaaacgaaaccaaagatggcctccaaactggaaggaagcagcagtacaggcgac
agagcaggagtgagtgatgcagcagctggctctcagtgctcagaccttcctcagatggag
gtgatctgtgctgattcggcagacgtagtggagatagtggacaagccagataaaagttcg
agcaaaggaaagacgaaagctaccaagcgcaagcccagtaaagaggccccagtattgctg
gatgatctggactttgctgcagcactgggtggtggagcatcagataccggcttcaagaag
aagaaaactgccaaaaaggccactcccacaccgagtgcggaatcatccattcctgcaagt
gcagatgacttgtcagcgagaacaactctcatcatctgcccgctctctgtaatcagcaac
tggctggatcagtttgagcagcatgtgcgttctgacgtgaagttaaatgtgtatctgtat
tacggcccggagcgcaacaggagcaagacctttctgtcctcccaggatgtggtgatcaca
acctacaacatcctctctgctgactttgggaataaaagtcccctccatgggatcaattgg
ctgagggtcgtgctggacgaagggcacattgtaagaaaccctaatgcacagatgagtaag
gccgtgctcgaactaaaagctcagcggcgctggattttgtcaggtactcctatccagaac
ggtgtgaaggacctgtggatgctgctggccttcctgcgcctgaagcccttcgatgtgaga
gactggtggaatcgagtgatccagagacccgtcactcagggagtcagggctggcctgcag
aaccttcagaccctggtgaagtgcatcaccctgcggcggaccaagaacagtgagctgaat
ggccgccctctggtgtctctgcctgagaagacagtgtgtgtggaacaggtcgagctgagc
cagtcagagagagacgagtatgagctggcacgaaatgagggaagaaaaaccatccgcaga
tacgtagctgaagggtcagtcttaaggaattatgctgatgtgctggccatcctgatgagg
cttcgacaacactgctgccaccctgacctgctggcaaaaacatcctcagacctgggtgct
gcagcgacacctgcagagctgcgggagcgtctaatagagaagctgcggttggtgttggcc
agcggctctgacgaggagtgctctgtgtgtctggattcagtgcgtctgcccgtcattaca
cactgtgcgcacgtttactgccggccctgcatcgcccaggttatcagctctcagcaggaa
acagcacgctgtcctctctgtcgaagtgagatcaagaccagcgagctcgtggagtttcca
caggaggaagtggaggaggagaccagtgcaaactctaagtggaggacaagctccaaggtg
caggcgctgatgggaaacctgctcaggctgagacatgaagacagcagcattaaatgtttg
gtcgtctcgcagttcacacgcttcctcaccatactggagactccgctcagagagcatggt
ttcagttttctgcgtttagatggcaccatgagccagaagaagaggacccaggtcatccag
gagtttcagagctctgcagccgacagcccctccatcatgcttctgtcactcaaagccgga
ggggtggggcttaacttgacggccgcctctagagtttttctcatggaccctgcctggaat
cctgctactgaggaccagtgtattgaccgctgccaccgtttgggacagacaaggaaggtc
tttgtcaccaagttcattgtcaaaaactcggtggaggagaacatggtgaagatccagagg
cagaagcaggacctggtggagaaggcttttggctcgtcaaacgctaaaagggaaacctct
cgtattgatgacatcaaagctctgatggagctgtag

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