Epinephelus fuscoguttatus (brown-marbled grouper): 125901108
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Entry
125901108 CDS
T08419
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03013
Nucleocytoplasmic transport
efo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125901108 (pnn)
03015 mRNA surveillance pathway
125901108 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125901108 (pnn)
03041 Spliceosome [BR:
efo03041
]
125901108 (pnn)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125901108 (pnn)
Spliceosome [BR:
efo03041
]
Complex C
Other components
EJC/TREX
125901108 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Beta-barrel_CAF17_C
Toxin_trans
Motif
Other DBs
NCBI-GeneID:
125901108
NCBI-ProteinID:
XP_049452470
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Position
LG14:complement(31512380..31518188)
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AA seq
693 aa
AA seq
DB search
MAVAVRSLQDQLEKAKESLKNVDDNIRKLTGRDPNESRPGQIRRLGGPMAGPGGGRGRGI
NLLRRSLSDMGSGGPPAKQRDIEGALLRLAGDQRARRDMRHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVSTEKQKRRSEIEQK
LEVQAEAEKKKVESEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNRLVKYIRTK
TKPHIFYVPGKMCSASQKLLDDSTKKLNAVFEERREAFAEHLSKMESRPRRQPNRDQDGN
TAATGMDHSAEGKPAGQVVKVTGNKGIAVMEEEEEEDEEEEEEKERRKEGDRKVKEKDKG
EEREEREKEVLKKVEEKVEGMELSEEGSEEKKEGEEGVKGGEDSEEKGEKEASPRSEEME
VEVGPEQADRSKGEGGETDSKQEPTDLQNEKTQNTQSSEPTVTSQDAPDISHQPQLSHAT
EEPAEKSSEAQGSSPPLEPQTAFMVPGQDCIIPGLEVQNSATETQAVEGKPGGEAPPKLP
DSQEAPSITPAPSKEEEDVGRGRKKEKEPKKGRSHSNSSSSSSSGSSSSGSSSSSSGSSR
SSSSSSSSSSSSSNSSSRSRSRDSGKRKRRPSDRARDRKKGEERGHRKRGGSGGGGRDSK
GSKERRKRSEEGRGRSSRSDREHKDRDRKDKRR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcggagcttgcaagaccagctcgaaaaagcaaaggaaagcctgaaa
aatgtggacgataacattcgtaaattaacgggacgtgatcctaatgaatcgagaccgggt
cagatccgtcggctcggcggccccatggcaggccccggtggaggtagaggcagaggaatc
aacctgctcaggcgtagtctctcagacatgggaagcggcggcccccctgccaagcagagg
gacatcgaaggagccctgctgaggctggcaggggaccagagggccaggagagacatgcgc
cacgacagcgacgccgaggacgatgacgatgtcaaaaagccggcgttgcagtcgtctgta
gtagctacctccaaggagagaacacgcagagacctcattcaagatcaaaccatggatgag
aggggcaaacagaggaatcggcgtatgttcggcctgctgatggggaccctacaaaaattt
aaacaagagtccaacgtctccacagagaagcaaaagcgacgttcagagattgagcagaag
cttgaggttcaagctgaggctgagaaaaagaaggtggagagtgaaaagagggagctgttt
gaagagaggagagccaaacagactgagctgaggctactggaacagaaagtggaattagct
cagctgcaagaggagtggacaagccacaacaatcgtctggtgaaatacattcgtaccaag
accaagcctcatatcttctatgtgcctggaaaaatgtgctccgcctcacagaaactcctc
gatgactccaccaagaaactaaatgctgtgtttgaggagaggcgcgaggcttttgccgag
cacctcagcaagatggagtcccgcccccggcgacagccaaaccgtgaccaggatggcaac
acggcagcaacagggatggaccactcggcggagggtaagccagcaggtcaggtagtcaag
gtgacaggtaacaaggggattgcagttatggaggaagaggaggaggaagatgaggaggag
gaggaagagaaggagaggagaaaggagggggatagaaaggtgaaggagaaggacaagggt
gaggagagggaggaaagggagaaggaggtgttgaagaaggtggaagaaaaggtggaggga
atggagttgagtgaggaggggagtgaggagaagaaggaaggagaggagggggttaaagga
ggagaggacagcgaggagaagggagagaaggaggcaagtccaaggtcagaggagatggag
gtggaggttgggccagagcaggcagacaggagtaagggtgaggggggagaaacagacagt
aaacaggagcccacagacctccagaatgaaaagacccagaacacccagtcctctgaacca
actgtaaccagccaagatgcaccagacatcagtcaccagccccagctcagccacgctaca
gaggaaccagcagaaaagtcctctgaggcccagggatcctctccacccttagaaccccaa
acagccttcatggtgcctgggcaggattgcatcatccctggccttgaggtccagaactca
gccactgagacccaggctgtggaagggaaaccagggggcgaagcacccccaaaacttcct
gactcccaggaggcccccagcattacccctgcaccctctaaggaggaagaggacgttggg
agagggaggaagaaggaaaaggagccaaagaagggccgcagtcatagcaacagctcctcc
tcttcctcctccggctcctcctccagcggaagctcgtcctcttcctccggatctagccgc
tcctcttcgtcgtcctcatcctcttcgtcctcatcatccaacagcagcagccgcagtcgc
agccgagacagtggcaagcgcaagaggaggccgtcggatagggccagggacaggaagaaa
ggagaggagcgaggtcaccgcaagagaggagggagtggcggaggagggagggactcgaag
ggatccaaggagaggaggaagaggagcgaggaagggaggggcaggtcgtcccgcagcgat
agggagcataaagatagagacaggaaggacaagagacgctaa
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