Epinephelus fuscoguttatus (brown-marbled grouper): 125901311
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Entry
125901311 CDS
T08419
Symbol
si:ch211-266g18.9
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125901311 (si:ch211-266g18.9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125901311 (si:ch211-266g18.9)
Membrane trafficking [BR:
efo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125901311 (si:ch211-266g18.9)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
TPR_Vps41
Clathrin
Motif
Other DBs
NCBI-GeneID:
125901311
NCBI-ProteinID:
XP_049452913
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Position
LG14:complement(15337900..15348846)
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AA seq
857 aa
AA seq
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MAFRAFTQTHIYEKQSAPKEKDKSSIQCLECYDRNVYIGTKDATVQHLILPSSTNADLSP
GQSKIREGKARKLGSSNQVTQLRVVPLFNHLLVLWDRSVTALNMFSLEPVHALKKIQHVS
LFEVRDSSLSAQAACVEMVTSSSRRKVIRIHVVGVDRWEVVKEVPLLQDPVALAVDGASV
CVATSDRYLLCDTETGSSEELFPHDHSRQRVIVTSVGRGEFLLNGPGSLGMFVMKTGICQ
RPPLQWPQEVLAVGVCFPYILTLQPQVLSVYSMVDQQRKQTVSLSGGKGLLSTSDGVLAF
TERDIFSLRLVPVEEQIQALVQDERVEEALSLLDGVQSHRPLDSFKELQKAITCLAGFVH
FYQEGFSEARDLFITGELDPREIIRLYPDMQWCLSEDFQSQLDQVNKGRDLRVLRHEDRN
TFHHYLVFLGDFLRAVRGTEQGLKCVQEVDCALLRLYVELEDAENLQQLVAFPNECRLKY
CVPVLEQHNRFFALGSLYQSHGSQIDAIKTWVKIADGLHKDPSCSDVYGHIVWTLSQLQD
RDAVWKFADWTLQSNQEIGVQIFNKRHPHDQFETQDVLALLEKYPLALLLYLEFLIHDLK
SEEERHHNRLALAYVTQMLQEEEEADLRETRGKLQQLLWESKFYDISAVYESVKSATLHT
EKAILLGRSGQHSQALQVLVHEKGDLQAAEAYCCRAAQGRDSQFRQTLLFTLLQIYLSSE
DLTSAAVDLLNNNPGVFATERIIQLLPDSWSVQLVSQFLIGSLRETFHQRRMARLQKALG
QVELMRHKVICRPQKQCSDWTRGGSVRYVRETSQSHSLPVTSTASRCTPAALAFHHHEDA
DVAIYCLLMQICASLHS
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcttttagagcttttacacaaacacatatctatgaaaagcaatcagcccctaaagaa
aaggacaaatctagcatccagtgccttgaatgctatgaccgaaatgtgtatatagggacc
aaagatgcaacagtccagcatctaattcttcctagtagcacaaatgcagacctgagtcca
ggccagagcaaaataagagagggcaaggcgagaaaactaggctcaagcaaccaagtaacc
caactgagagtagtcccacttttcaaccatctgctggtcctgtgggaccggagcgttact
gccctcaacatgttctccttagagcccgttcatgctttgaaaaagatccagcacgtgtct
ttattcgaggtgcgcgactcatcgctctcagcccaggcagcatgtgtggagatggtgact
tcgtccagccgcaggaaggtgatccggatccacgtggtgggagtggacaggtgggaggtt
gtaaaagaagtccctctgctccaggaccctgtggccttggcggtagatggtgccagtgtg
tgtgtggcgaccagcgacaggtatctgctctgtgatactgagactgggagcagcgaggag
ctctttcctcacgatcacagcaggcagcgcgtcattgttacctcagtgggacggggggaa
ttcctcctgaacgggccaggatctctgggcatgtttgtgatgaagacagggatatgccag
cgccctcccctgcagtggcctcaggaggtgctggcagtcggagtatgtttcccttacatc
ctaaccctgcagccccaagtgctgtctgtctacagcatggtagatcagcagcgcaaacag
actgtgagtctcagcggaggaaagggtctcctctccacatcagatggtgtgttagcgttc
acagagagagacattttcagcctgcgtctggtgccagtcgaagagcagatccaggcactt
gtacaggatgagagggttgaggaggcattgtcgctgctggatggagttcaaagccatcgt
ccacttgactcattcaaggagctgcagaaggccatcacttgcctggctggatttgttcat
ttttaccaggagggtttttccgaggccagagatctcttcatcacaggtgagctggacccc
agagaaatcatccgcctctacccagacatgcagtggtgtctcagcgaggactttcaatcc
cagcttgatcaagtgaacaagggcagggatctccgggtgctccgccacgaggacaggaac
acatttcatcattacctggtctttctgggagattttctcagagcagtcagagggacggag
caaggcctgaagtgtgttcaggaggtggactgcgccctcctgaggctgtacgtagaactg
gaagatgctgaaaatctgcagcagcttgtagcattccccaatgagtgcagactgaaatac
tgtgttcctgttttggagcaacacaacagattttttgcattaggttccctctatcaaagc
catggaagtcaaattgatgccattaagacttgggtgaaaatcgcagatggcctccacaaa
gacccctcttgctcagatgtatatggacacatagtgtggactctcagtcagctgcaagac
agagatgctgtgtggaaatttgcagattggactcttcaaagcaatcaagagataggggtg
cagattttcaacaagcgtcacccacatgatcaatttgagacacaagatgtcctcgctctc
ctggagaagtacccactggcgctgcttttgtatcttgagttcttaatccatgatttgaag
agtgaggaggagagacatcacaaccgtctggccctggcatatgttactcagatgctgcaa
gaggaagaggaagcagatttgagggagaccagagggaagttgcagcagctgctatgggaa
tccaagttctacgacatctccgctgtgtatgagagtgtcaagtcagcaaccctgcataca
gagaaagcgattctcctggggaggagcggtcagcactctcaggcactgcaggtgcttgtt
cacgagaagggagacctccaggctgcagaggcctactgctgcagggctgcccagggccgg
gactcccagttcaggcagaccctgctgttcaccctgcttcagatctacctgagctcggag
gatctcaccagcgctgctgtggatcttctcaacaacaaccctggagtctttgcaacagag
aggatcatccagctgctgcccgattcgtggtctgttcaactggtctctcagttcttaatt
ggatccctcagagagaccttccaccagaggcggatggcgaggctgcaaaaggctttgggc
caggtggagctcatgcggcacaaggtcatatgcaggcctcaaaaacaatgttcagactgg
acaaggggcggaagtgtaaggtatgtcagggagacctcacagagccacagtttgcctgta
acctccacagcgagccggtgcacaccagctgcactggcctttcatcatcatgaagacgcc
gatgtagcaatctattgtttgcttatgcaaatatgtgcatctctgcactcttaa
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