Epinephelus fuscoguttatus (brown-marbled grouper): 125901809
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Entry
125901809 CDS
T08419
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125901809 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
efo03036
]
125901809 (chd8)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125901809 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HDA2-3
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
125901809
NCBI-ProteinID:
XP_049453694
LinkDB
All DBs
Position
LG15:10316457..10338118
Genome browser
AA seq
2584 aa
AA seq
DB search
MADPIMDLFEDTPLFNLDALPDDSFSQGSSDPVEEALKLALGQVDPPTEPELTVNAGLGV
SVAAPTIPDPAPVQVPTQQSVPVATAQTVSIAAAPAVAPVPAPVPVDTVPQIQAQTTIPI
VSSTSVATSSTVLLSSPLTVSSSPVTTTATTQQQLTQITHQITPQQLAAITQQAGGKIVI
LKGPQGQAQVLQTVSGATGQTSGKVIRVLSGTPLKPGMSILQGGTVLNQASPGQAQVKVG
AAGVQRLLQSPNGPVKQMLLTSVPQQVQQTQGQTVQVQIPAQAQMAQGQTQVQVQPQAQA
AQIQVQTQGQVQLQPAMQAQTQGGEAKRITLVLQQPSQAGSAAPAGQAQQQVTQVQQVQT
AQGGQQQQQQQQQQAPARLVLGQLPGGKLVLQGSQLAALTQARAAGQAGGQPKVLTIQLQ
VQQQPNQQGGIKYQLVSGAGNTGSPQVLQISQGQGGQRVAVPLKMLLQPQTSSASSAGGT
VSVVKVINTSTAGPSTTTTTPSQAIRITKAPGEPASVRRVEILCKQEKANRIVAEAIARA
KARGEKNLPRVLNQDELPATQTSPELGGTVTVVSAAKKKTSGGGSKKKSPIAGATTPKTT
GGADKKGKVKTPGGTTGVAGGTIIPGAGNKSKSKTKTNTITLVGAKKRKRNASSDHSDGE
LSPASPAALDDDMIMKRRSNRVVKRKKYTEDLDIKITDDEDEQEDVDVTTTAAAVASISG
GTAAQLKQELELDVDGQPSMQFFVENPSEEDAAIVDKVLSLRLTKKEVSPGQYTNVEEFF
VKYKNYSYLHCEWASLEQLEKDKRIHQKIKRFKTKHAQMRHIFQEDEEPFNPDYVEVDRI
LDVSHSVDKDNGEPVIYYLVKWCSLPYEDATWELKEDVDEGKVEEFSKIQNRQPRLKRTP
RPSASSWKKLEETREYKNGNTLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAL
LSEVYAAGIQGPFLVIAPLSTITNWEREFSTWTNMNAIVYHGSLASRQMIQQYEMYCKDD
KEHLIPGAYKFDALITTFEMVLSDCPELREISWRCVIIDEAHRLKNRNCKLLDSLKMLDL
EHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSETEFLRDFGDLKTEEQVQKLQAILKPMM
LRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSLGANSNSNVPNLLNTM
MELRKCCNHPYLINGAEEKIVAELREVYDPMAPDFHLQALIRSAGKLVLLDKLLPRLKAG
GHKVLIFSQMVRCLDILEDYLINKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC
TRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREML
DKASLKLGLDRAVLQSMSGNKESNVNGIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCE
EDIDQILQRRATTITIESEGKGSTFSKASFVASENRNDIALDDPEFWQKWAKKADIDMDS
MNRKNTLVIDTPRVRKQTRQFSSLRGEGGDLSDLDSDDEYPPANSRQSRASRRSDRHSGG
GYGRTDCFRVEKHLLVYGWGRWRDILSHARCKRRLSERDVETICRVILVFCLLHYRGDEN
IKSFIWELITPPENGREPQTLLNHSGLSIPVPRGRKGKRVKAQSTFDVQKVEWIRKYNPD
TLLLDDSYRKHLKHQCNKVLLRVRMLYYLKQEVIGEHAESVLKGADIRDVDIWMPEMEQQ
EVPAGWWDTEADRSLLAGVFKHGYEMYTTMRADPCLCFLERAGRPDDKAIDAEQHTGDAE
LGDDADYDKYSEDPEFKPASRHAKDLFEEPDSMNVDDEISVEDKVGPVITESFSSQSGAC
DWPSSSSLTARLRRLITAYQRSYRQEQLKIEAEAKGDRRRRRCEQASKLKEIARQERQQR
WTRREECDFYRVVSTFGVEKIKKELGVPEGGDPEFDWNRFRTFARLDKKTDESLSRYFRS
FVAMCRRVCHLRPGRGEDPSELSQTVAPITEERASRTLYRISLLRRLRERVLPHPSLEER
LPLAPTSSELPAWWNIPEHDRQLMLGAALHGVSRTELSIYSDPQFTFSQAREEFIQNQQA
PPPPPPPQALPIMPLSQPKIEQDMPGVRDEVGEEDARLLGGEISADLQNTPLSHHDGKAR
GQGWSLKRSRGRVGKTGRKGEGGSDSDSDSDSGSSSSERSGSSDDSGESEEEVERAGMKL
CDVDEDNSLLSMTTSQDGIPPPDPLRVDWPKDRVLINRLDSLCTLVLTGQWPSGRRYLPE
AQLNPSSELVGDEMAYTRVIRKPSSTPGGPGEDGEDGEFTVKLLKEEGLKLTFSKQALMP
NGSGGESSSRKRRKDQELSDPDGLGDPLERTPRRRDPPTWLKENPDYEVEGDMLELLVNR
SKRKRRRRADKALTGSEKVKVINMRTGRKVGAALCPMLQDLREYLEENPDNAVAPDWSET
VRNSGFLPETFFHRLLTEHSEIPKKSRRRHHHHHHHHHAPEPTPEDPNLDGVEEETLVSD
GAYMMDEEDLETSHHFLTSPDFDVKIEGGDSLSQGDYDSSDQEALLDDVIIAQKDSDSSS
SSED
NT seq
7755 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggacctctttgaggacacacccctgtttaacctggatgccctc
ccggatgattccttctctcagggttcctcagaccctgtggaggaggcccttaagctggcg
ttgggccaagtggacccaccaactgagcctgaactcacagtcaacgcaggccttggtgta
tctgtagcagctcccaccatcccggaccctgctcccgttcaagtccccacacagcagtca
gtgccggtggcgactgctcagactgtttccatagctgcagctcctgctgtagccccagta
cccgctcctgtcccggttgacactgtacctcagatccaggcccagaccaccatacccatt
gtcagcagcaccagcgtggccaccagtagcactgtcctgctgagctcacctctgactgtt
tccagctccccagtcaccaccaccgccaccacacagcaacagctcacacagataactcac
cagataactccacagcagttagctgccatcacacagcaggctggtggcaaaattgtcatt
ctcaaaggtccccagggtcaagcccaggtgctgcagactgtatcaggagccacaggccag
accagtggaaaggtaatccgtgtgttgtctggcactcctcttaaacctggcatgtccata
ctgcagggggggacagtcttgaatcaggcaagcccagggcaagcccaagtcaaggtgggt
gctgcaggggtgcagaggctgctgcagtctcccaatgggccagtgaaacagatgctgctg
acctccgtgccccagcaggtgcagcagacgcaaggccagacagtccaggtgcagattcct
gcccaagcacagatggctcaagggcagactcaagtccaagtccagccccaggctcaagct
gctcagatccaagtccagacccaaggtcaggtgcagctccagccagcaatgcaggcccaa
actcagggtggcgaagcaaagcggatcaccctggttctccagcagccctcccaggctggc
tctgctgcgccagcgggtcaagcccagcagcaggtcacacaagtccagcaggttcagaca
gcccaaggggggcagcagcagcagcagcagcagcagcagcaggccccagctagactagtg
ctggggcagctccctggaggcaaactggtgcttcagggaagccagctagcagccctgacc
caggctcgggctgcaggccaggctggagggcagcccaaagtcctcacgattcagctgcag
gtgcagcagcagccgaaccaacaaggaggtattaagtaccagctcgtctctggagctggc
aatactggcagtccacaggtgttgcaaatctcacagggccaaggaggacagagagttgca
gtgccactcaaaatgcttctgcagccacagacaagctcagcatcctcggctggtggcaca
gtctctgtggtgaaggtcatcaacacgtcgactgcaggcccctccaccacaaccaccact
ccgtcccaggctatccgcatcaccaaggcccctggcgagcctgcctctgtgcgacgcgtg
gagatcctctgcaagcaggagaaagcaaaccgtattgtggctgaagctatagctcgggct
aaggcacgtggtgagaagaacctgcctagagtcctgaaccaggatgaacttccagccaca
cagacctccccagaattggggggcactgtgactgtggtgtctgctgctaagaaaaagacc
agtggaggaggaagcaagaagaaaagccccatagctggagcaacgacacccaaaaccact
ggaggggccgacaaaaagggcaaagtgaagacaccaggaggaacaactggagtagctgga
ggcacaataatacctggggctgggaacaagagcaaaagcaagactaagacaaacactatt
actctagtgggagctaagaaaagaaagagaaacgcatcttcagaccactctgatggggag
ttgagccctgcctcacctgctgcactggacgatgacatgattatgaagagacgctccaat
cgtgtggtgaagaggaagaagtacacagaggacctggacatcaagatcacggacgacgag
gatgaacaggaagatgtagatgttactacaaccgcagcagctgtggcctccatcagtggc
gggacagcagcgcagctgaaacaggaattagagctggatgttgatggacagcccagcatg
cagttctttgtggaaaacccaagtgaggaagacgctgctattgtagacaaagttctgtct
ttgaggctaaccaagaaagaagtgtctccgggccagtataccaatgttgaggaattcttt
gtaaaatacaagaactattcatatttacactgtgagtgggccagtttggagcagctggag
aaagataaaaggatccatcaaaagatcaagaggttcaagaccaagcacgcccagatgagg
cacatctttcaggaggatgaggagccttttaatccagactatgtagaggtggacaggatc
ctggatgtttcccacagtgtggacaaggataatggcgagcctgttatctactacttggtc
aagtggtgctctctgccttatgaagacgccacttgggaactgaaagaggacgtagacgag
ggcaaggtcgaagaatttagcaaaatccaaaaccgacaacctcgcctaaagagaacgcca
cggccgtctgccagttcatggaagaagttggaggagaccagagagtacaagaatggcaac
acactcagagagtaccagctggaaggagtcaactggctgctcttcaactggtacaacagg
cagaactgtatcctggcagatgagatgggtctggggaagaccatccagtctatcgcgctg
ttgtctgaggtgtacgctgctggcatccaaggccctttccttgtcattgctcccctctcc
accatcactaactgggagagggagttctccacatggaccaacatgaacgcaatcgtctac
catggcagcctggccagccgacagatgatccagcagtatgagatgtactgcaaggatgac
aaggagcacttgatcccaggtgcgtacaagtttgacgccctcatcacaacctttgagatg
gtgttatctgactgcccagagctgagggagatttcctggcgttgtgtgatcattgatgag
gctcaccgtcttaagaatcgcaactgcaagctgttggacagcttgaagatgctggatctg
gaacacaaggtgttgttgaccggcactcctctccagaacactgtggaggaacttttcagt
ctgcttcatttcctggagcctgctcagttcccttctgagactgaattcctcagagacttt
ggagacctcaaaacagaggaacaggttcagaagctgcaggccatcttgaaacctatgatg
ttacgaaggctcaaggaggatgttgagaagaacttggcacccaaacaagagaccatcatt
gaggttgagttgacggatgtccagaagaagtactaccgggccatcctggagaggaacttt
agtttccttagtttaggggcaaacagtaacagcaatgtccccaacctgctcaacactatg
atggagctacgcaagtgctgcaaccacccctacctcatcaatggcgcggaagagaagatt
gtagcggaattgcgggaggtgtatgaccccatggctcccgacttccatttgcaggccctg
attcggtcagccggcaagctggtgctactggacaaactgctgcctcgcctcaaggctggt
ggccacaaagtgctcatcttctcccagatggtgcgctgcttagacattctggaggactac
ctcatcaacaagagatacctttatgagcgaattgatggcagagtgcgtgggaacttacga
caagctgctatcgatcgcttcagcaagcccgactctgaccgctttgtcttcctgctgtgt
acccgtgctggtggcctgggtattaacctcactgctgcggacacttgtgtcatatttgac
tctgactggaaccctcagaatgacctgcaggcccaagcacggtgtcatcgtattggccag
tctaaggcggtaaaggtctaccgtctgattactaggaactcgtatgagagggagatgctg
gataaagcaagccttaagcttggcctggaccgtgctgtcctgcagagcatgagtggcaac
aaagaaagcaacgtcaatgggattcagcagttctccaagaaggagattgaggacctgctg
aggaagggtgcctatgctgccatcatggatgagaacgatgaaggaagtcgcttctgcgag
gaggacattgaccagatccttcaacgaagagccactaccatcaccattgagagtgagggc
aagggctccacattctccaaggccagctttgttgcctctgagaaccgcaatgacattgcc
cttgatgaccctgaattctggcagaaatgggccaagaaagctgacatagacatggactcc
atgaacagaaagaacacccttgtgatcgacactcccagagtccgcaagcagacccgtcag
ttctccagtttacgaggcgaaggtggagatctgtctgatctagacagcgatgatgagtat
ccacctgccaattccagacagtcgcgtgcctcccggcgctctgaccgccacagtggaggg
ggttacggccgaactgactgtttccgggtggagaaacacctgcttgtctatggttggggt
cgctggcgggacatcttatcccatgcaagatgtaaacgtcgtcttagtgaacgtgacgtg
gagaccatctgccgtgtcatcctggtcttttgtctgctccactatcgtggggatgagaac
atcaagagtttcatctgggagctcatcacaccgcctgagaatgggcgtgaacctcaaaca
ctacttaaccactctggcctgtctatccctgttccaagaggcagaaagggtaagagagta
aaggcccaaagcacatttgatgttcagaaggtagagtggatccgcaagtacaaccctgac
accctgcttctggacgacagctaccgcaaacacctcaagcaccagtgcaacaaggtgttg
ctgagggtgcgaatgctctactacctgaaacaggaggtgattggtgaacatgccgaatct
gttctgaaaggggcggacatcagggatgttgatatctggatgcctgagatggagcagcag
gaagtccccgcaggatggtgggatactgaggcagaccgctcactgcttgctggcgtattc
aaacatggttatgagatgtacaccactatgcgtgctgatccctgcctctgcttcctggag
agagctggtcggcccgatgacaaggccattgatgccgagcagcacactggtgatgccgag
cttggagatgatgctgactatgataagtactcagaggacccagagttcaagcctgcatca
agacacgccaaagatctttttgaggagcctgactccatgaacgtggatgatgagatttct
gtagaagacaaagtggggccagtgataacagaaagcttttccagccagagtggtgcatgt
gattggccatcgagctcatcactcacagcgcggttgcggcggctgattacagcttaccag
cgcagctacaggcaggagcagttgaagatcgaagcagaggcaaagggtgaccgcaggcgc
aggcggtgcgaacaggccagcaagctgaaggagattgcacggcaggagcgccagcagagg
tggacacgtagggaagaatgtgacttctaccgtgtggtatcgacttttggtgtggaaaag
ataaagaaggagcttggggttcctgagggaggagatcctgaatttgactggaaccgcttc
cgtacctttgctcgtctggacaaaaaaactgatgagagcctcagccgatacttccgctct
tttgtcgcaatgtgccggagagtttgccacctgcgcccgggccgtggtgaagatccatca
gagctttcccaaactgtggcccccatcactgaggagcgtgcttcccgtaccctttaccgt
ataagcctcctgcgtcgcctccgtgagagagtcctgccccacccatccctagaggagcgt
ctgcctctggctcctaccagctccgagctgccagcttggtggaatattccagaacatgat
cgtcagctgatgctgggtgctgcactgcatggtgtcagccgcactgagctctccatctac
tcagacccacagttcactttcagtcaggcacgagaagagttcatccagaaccagcaggct
ccaccacctccacctccgcctcaggcactgcccatcatgcccctcagccagccgaagatt
gagcaggacatgccaggtgtgagggacgaggtaggggaagaggacgcacggttgcttgga
ggtgaaatcagtgctgacctgcagaatacacccttgagtcaccatgacggcaaggcacga
gggcagggctggagcctcaagaggagcaggggcagggtcgggaaaacgggaaggaaggga
gagggaggctcagattcggattcggattctgattcaggctcatcgtcatccgagcgatca
ggcagcagtgacgacagtggagagagtgaggaagaggtggaaagagcgggcatgaagctg
tgtgacgtggatgaggacaacagtttactctctatgactacgtctcaggatggcattcct
cctcctgatcctctcagagtggattggcccaaggatcgtgtgttgatcaaccgtctggac
agtttgtgtacgctggtgttgactggtcagtggccctcagggcggcgctacctgcctgag
gctcaactgaatcctagctcagagctggtgggagacgagatggcctacacaagggtgatc
cgtaaacccagcagcacgcctggtggccctggggaagatggagaagatggagagttcact
gtcaagctccttaaggaggagggactgaagctgaccttctctaagcaggccctgatgccc
aatgggtcagggggagagagcagtagccgcaagcggcgcaaggaccaagagttatcagac
ccagatggactcggtgatccactggagcgtactcctcggcgcagggaccctcccacctgg
ttgaaggagaacccagattatgaggtggagggagacatgctagagcttcttgtgaaccgg
agcaagaggaagaggaggaggagggcagacaaagccctgacaggcagcgagaaggtcaaa
gtcattaacatgaggacaggaaggaaggttggagctgctttatgtccgatgctgcaagac
ctgagggaatatctggaggagaatcctgataacgctgtagcacccgactggtctgaaact
gttcggaactctggctttctgcccgagaccttcttccaccgactgctgacggagcattca
gagatcccgaagaaaagccgacgccgccatcaccatcaccaccatcatcaccacgctcca
gagcccacccctgaagaccccaacttggacggagttgaagaggagacactggtgtcagat
ggagcctacatgatggacgaggaggacctggagacctcccatcacttcctcaccagtcca
gactttgacgttaaaatagagggtggcgacagcctttcccaaggtgactatgacagctcg
gatcaggaggcgctattggacgatgtcatcatagcacagaaggactctgactcctcatca
agctcagaggattga
DBGET
integrated database retrieval system
