Epinephelus fuscoguttatus (brown-marbled grouper): 125901811
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Entry
125901811 CDS
T08419
Name
(RefSeq) integrin beta-1-like
KO
K05719
integrin beta 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03271
Virion - Rotavirus
efo04145
Phagosome
efo04510
Focal adhesion
efo04512
ECM-receptor interaction
efo04514
Cell adhesion molecules
efo04530
Tight junction
efo04810
Regulation of actin cytoskeleton
efo04820
Cytoskeleton in muscle cells
efo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
125901811
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125901811
04514 Cell adhesion molecules
125901811
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125901811
09144 Cellular community - eukaryotes
04510 Focal adhesion
125901811
04530 Tight junction
125901811
09142 Cell motility
04820 Cytoskeleton in muscle cells
125901811
04810 Regulation of actin cytoskeleton
125901811
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125901811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125901811
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
efo04147
]
125901811
04515 Cell adhesion molecules [BR:
efo04515
]
125901811
04090 CD molecules [BR:
efo04090
]
125901811
Membrane trafficking [BR:
efo04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
125901811
Exosome [BR:
efo04147
]
Exosomal proteins
Proteins found in most exosomes
125901811
Cell adhesion molecules [BR:
efo04515
]
Integrins
Integrin beta subunits
125901811
CD molecules [BR:
efo04090
]
Proteins
125901811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
125901811
NCBI-ProteinID:
XP_049453697
LinkDB
All DBs
Position
LG15:12839299..12867722
Genome browser
AA seq
800 aa
AA seq
DB search
MDLRLLLIATLSAILGGSWAQQEGSICIKANAQSCGECIQVSESCGWCSDEKFLTEGESK
SARCDDLESLKNRKCNLSKIENPRGRIDINMNKDVTNRKDDKVPKKLSPEQITQIQPQKL
TLTLRSGEPQTFDLKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTDLMEEMQKITSD
FRIGFGSFVEKTVMPYISTTPARLNNPCTGNQNCTSPFSYKNVLKLTNEGNEFNRLVSQQ
QISGNLDSPEGGFDAIMQVAVCEEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDG
RCHLEDNKYTMSHYYDYPSIAHLVQKLSDHNIQTIFAVTEEFQPVYKELKNLIPKSAVGT
LSSNSSNVIKLIIDAYNSLSSEVILENSRLPEGVTINYKSICKNSVEGTGENGRKCSNIS
IGDEVSFKISIESQKCPSHGKSEVIKIKPLGFNEEVEVVLNFICDCQCAAEGEPNSDQCY
EGNGTFECGACKCNEGRIGRVCECSKDEVRTEDLDANCRKDNGTDICSNNGDCVCGTCEC
KKRENAAEVYSGKYCECDNFNCDRSNNKLCGGHGRCECRKCICDANYTGSACDCSLDTST
CLAKNGQECNGRGKCECGICKCEDPKFQGPTCEICPTCPGVCTEHKDCVHCRAFEAGEKK
DTCEQRCNYFQLIKVKDRDKLPQPTDQSFPLTHCKERDANDCWFYYTYAIRNGTKEVYVV
ETLECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTG
ENPIYKSAVTTVVNPKYEGK
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcggttacttttaatagcaacgttatcagcgatccttggtggcagctgggca
cagcaagagggaagcatatgcatcaaagccaacgcacagtcgtgtggggaatgcatccag
gtctctgagtcgtgtggatggtgctcagatgaaaaattcctcaccgagggcgagtccaag
tcggctcgctgtgatgatctggagtccctgaagaatagaaaatgcaatttgtccaaaatt
gagaacccacgtggaaggatcgacatcaacatgaacaaggatgtcaccaaccgcaaggat
gacaaagtgcctaagaaactgtcaccagagcagatcacccaaatccagccacagaaactc
accctaactctcagatctggtgagccccagacttttgacctgaaattcaagcgtgctgag
gactaccccatcgacctgtattaccttatggacctctcgttctccatgaaagatgatttg
gaaaatgtcaagaacctcggcactgacctcatggaggaaatgcagaagattacctcagat
ttcaggattggatttgggtcatttgtggagaagacagtcatgccttacatcagcaccact
ccagccaggctcaacaacccctgcacaggaaaccagaactgcaccagccccttcagctat
aagaatgtattgaagctgaccaacgagggaaacgagttcaatcggttggtcagtcagcag
cagatctcaggaaacctggactctccagaggggggcttcgatgccatcatgcaggtggcg
gtctgtgaggagcaaatcggctggaggaatgtgactcgactgctggtgttttccactgat
gctggtttccacttcgctggagacggcaaactgggtggcatcgtgctgccaaacgatggc
aggtgtcacctggaggacaacaagtacaccatgagccactattatgactacccctccatc
gcccatttggttcagaaactgagtgaccacaacatccagaccatctttgcggtcactgag
gaattccagcctgtttacaaggagctgaaaaatctcatcccaaaatcagctgttggcacg
ctgtcctccaactccagcaatgtgatcaaactgattattgatgcttacaattctttgtcc
tctgaggtcattctggaaaacagccggctgccagagggagttaccatcaactataagtcc
atctgtaagaacagcgtggagggaacaggggagaacggcaggaagtgctccaacatctcc
atcggagacgaggtgtctttcaagatttccatcgagtcccagaagtgtccgtcacatggc
aagtctgaggtcattaaaattaaaccactgggcttcaatgaggaggttgaggtagttctg
aacttcatctgcgactgtcagtgtgccgcagaaggagagcctaacagtgaccagtgttat
gagggcaatgggaccttcgagtgtggagcctgcaagtgtaatgaaggacgtattgggcgt
gtttgcgagtgcagcaaagacgaggtgcggacagaggaccttgatgccaactgccgaaaa
gacaacggtacagatatctgcagcaacaatggtgactgtgtctgcggcacctgtgaatgc
aagaagagggagaacgctgcagaggtctacagtggcaagtactgcgagtgcgacaacttc
aactgtgaccgctccaacaacaagctctgtggaggacatgggcgctgcgagtgcaggaag
tgcatctgtgacgccaactacacaggcagtgcctgcgactgctcccttgacacttccacc
tgcctcgccaagaacgggcaggaatgtaatggccgcggtaaatgcgaatgtggcatctgc
aaatgcgaggaccccaaattccagggtccaacttgtgagatttgtcccacctgcccaggt
gtctgcactgagcacaaagattgtgtgcactgccgagcattcgaggctggcgagaaaaag
gatacctgtgagcaacgctgcaactacttccagctgatcaaggtgaaggaccgcgacaag
ctgccccagcctacagaccagagcttcccactgactcactgcaaagagcgagacgccaac
gactgctggttctactacacctatgccatcaggaacggcaccaaggaggtctacgtggtg
gagacgctggagtgcccatcaggacctgacatcatccccatcgtggcaggtgtggtagca
ggcattgtgctgattggccttgccctgctgctcatctggaagctgctcatgatcatccac
gaccgccgagagtttgccaagtttgagaaggagaagatgaatgccaagtgggacacgggt
gagaatccgatctacaaaagtgccgtaacaactgtcgtcaatccaaagtacgagggcaaa
tga
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