Epinephelus fuscoguttatus (brown-marbled grouper): 125901868
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Entry
125901868 CDS
T08419
Symbol
tnr
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04510
Focal adhesion
efo04512
ECM-receptor interaction
efo04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125901868 (tnr)
04518 Integrin signaling
125901868 (tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125901868 (tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
efo00536
]
125901868 (tnr)
Glycosaminoglycan binding proteins [BR:
efo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125901868 (tnr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Fn3_PBP1
EGF_Tenascin
EGF_2
Pur_ac_phosph_N
FN3_Tor_3rd
Fn3_Dep-1_2nd
Interfer-bind
Fn3_VIN3
DUF4998
DUF7949
Ig-like_NNF2
SPE9_EGF_3rd
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
125901868
NCBI-ProteinID:
XP_049453802
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All DBs
Position
LG15:complement(33223165..33492593)
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AA seq
1422 aa
AA seq
DB search
MLSRTGAESERETGNKRTKYSQKRCEWTGVVRFLPSMPLAQQHHRATAPAAGWILALALF
LALQGAAHAAPSGDNKLVRTTRVRRQIPGGNQSPSASSANETLRDQTVVFNHVYNINVPL
ESLCSVDLDASAPPAPGDGSRAELGSRPSVEGPVDPSGPAEYTEQTLDADSQVTFTHRIN
IPKAACGCPATTTIQQLATRVEMLEREVSLLRAQCGSGCCGESSAMGHMDFVPGCSGHGS
FSFDLCGCICEEGWAGKNCSEPRCPDDCSGQGVCVEGECVCDRDFGGENCSEPRCPSDCS
GRGLCIDGECVCEESFTGEDCMVGRCLNDCSDQGLCINGTCQCRPGYMGEDCSLVYCANN
CSKKGVCKEGFCVCQDGFAGDDCNSVAPAMNLRVRGVTDRTIDVEWEGSVVLTDFLVTYT
PSSPGGVQREIRIPGTTTTCIISDLEAGMEYNINVFAVINNSISVPASITVSTYLSNPDG
LVFKSITETSVEVQWLPFYYSFDGWEISFIPKDNDGGMTAQLPSTITSFVQTGLRPGEEY
TVNLVALRDQGRSQPVTATVTTLIDGPTQLIVRDVSDTVAFVEWTPPKAKIDQIVLRYGL
VGGEGPRTTFRLQPTLSQYSLQVLRPGSRYEVSVSGVRKGNESGSISTEFTTALSFFSEI
DAPKNLRLLSKTSTTLELEWDNSEAEVDGYQVVYSTLAGDQYDKVIVPRNEGATTKTSLT
DLLPGTEYGIGISAMKGSNQSTPATMNARTGLDVPMDLTVTASTDNTITLVWGVVQGPID
HYKVTYTSSSGISTELTVPKDVTTTTLVDLEPGTEYTITVAARRGRQQSSAATIDAFTGI
RPVTHLYLSEVTSDSVSVAWSAPAPPADLFILSYSSADGTDTSKVTLDGSKTRSLVQGLL
PSTQYTISLITIQGDVTSEPITASLTTGMDPPKEMTVSDVTEDAVTISWIKPLAPFEYYK
LSYQSARGRVDSVVIDSDVTNYTLSSLFPATEYEISLNAVRGSQESKVVSTSVFTAMDMP
SELTALNITPQGALLRWNPPVSSVDNYVLTLTHNQVTADTFLVEGNKQEHQLSKLKPSTT
YSVALYATKGPLTSGTVITNLQTPMDAPLNLTASEVNHRSALISWQPPITEIDNYMLTYK
STDGSRKELILDAEDTWIRLEGLAETTEYTVKLQAARGLDTSAVVSTTFTTGSRLFATPQ
NCAQHLLNGEILSGVYTIYINRDPSQGVQVYCDMTTDEGGWIVFQRRQNGLTDFSRKWSD
YRVGFGNLEDEFWLGLDNIQRIAAQGRYELRIDMKDGQESVYANYDKFSIGDARNLYKLR
IGEYNGTAGDSLSYHQGRPFSTKDRDNDIAVTNCALSYKGAWWYKNCHRANLNGKYGESR
HSQGINWYHWKGHEFSIPFVEMKMRPFNFRSISSKRRRSAPV
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgctctcaaggacaggtgcagagtcagagagagagactggcaacaagagaacaaagtac
tcacagaaaaggtgtgagtggacaggagtggtgaggtttcttcccagcatgccactggca
cagcagcatcacagggccactgcgcccgcagcaggctggatcctggctctggctctgttt
cttgctctacagggtgctgctcacgctgctccatcaggagacaacaagctggttcgtacc
accagagtgaggagacagatcccaggggggaatcagtccccctctgcttcctcagccaac
gagaccctgcgggaccaaaccgtggtcttcaaccatgtgtacaacatcaatgtacccttg
gagtctctgtgctctgtcgacctggacgcctccgcaccacctgccccaggtgatggttct
cgtgctgagttgggatccagaccttctgtggagggtccagtggatccaagtggaccagca
gaatacactgagcagacgctggatgctgacagccaggtaacattcacccaccgcatcaac
atccctaaagctgcatgtggttgtcctgcaacaactacaatccaacagcttgccactagg
gtggagatgctggagagagaagtgtccctgctcagagcacagtgtggatctggatgctgt
ggggagagctcagccatgggtcatatggattttgtcccaggctgcagtggccatggcagc
ttcagctttgacctgtgcggctgcatctgtgaggaaggctgggccggcaaaaactgctcc
gagccccgctgcccggacgactgctccggccagggcgtgtgcgtggaaggggagtgtgtg
tgcgaccgtgactttggaggcgagaactgctcagagccgcggtgcccttcagactgctca
ggtcgtgggctgtgtatcgacggggagtgtgtgtgcgaggagtccttcacaggcgaggac
tgcatggtcgggaggtgtctcaatgactgctcagaccaggggctgtgcatcaacgggaca
tgccagtgcaggcccgggtacatgggagaggactgctcgctggtctactgtgccaacaac
tgcagcaagaagggagtctgcaaggagggattctgtgtgtgccaggatggctttgcagga
gatgactgcaactctgtggcaccggccatgaacctgagggtacgaggcgtgacggatcgc
actattgacgtggagtgggaggggtcagttgtgctgacagatttcttagtgacctacaca
ccaagcagccctggaggtgttcaacgggagataaggattccaggcactactaccacctgc
attatctcagacctggaggcaggcatggagtacaacatcaacgtgttcgctgtcattaac
aacagtatcagcgtccccgccagcatcaccgtttcgacctatctctccaatcccgacggt
ttagtcttcaaatccatcacagagacgtcagtggaggtccagtggttacccttctactat
tccttcgatggatgggagatcagcttcatccccaaggacaatgacggggggatgactgca
cagctgcccagcaccatcacttcctttgtgcagactggtttgagaccaggggaggagtat
actgttaaccttgtggctctccgagaccagggtcgaagccagccggtcactgccactgtc
acaacactgattgatggccccactcagctgattgtgcgggatgtgtcagacactgtagcg
tttgtagaatggacaccacccaaagcaaagattgatcagattgtgttacggtacggcctg
gtgggaggagaaggtccacggaccaccttccgccttcagcccacactcagccagtactcc
ctgcaggttctgcgtcctggctctcgctacgaggtatctgtgagcggagtgagaaaagga
aatgagagcggatctatttccactgaatttactaccgctttatcgttcttctcagagatc
gatgcccctaagaacctgcggctgctgtccaagacatccaccaccctggagctggagtgg
gacaacagtgaggctgaggtggatggctaccaggtggtgtacagcactttagcaggagac
cagtatgataaagtgattgtgccacgcaacgagggagccaccacaaagacctctctcaca
gacctgcttccaggcacggagtatggcattggcatttctgccatgaaaggaagcaaccag
agcacaccagcaacaatgaacgccaggacaggtctggatgtgcccatggatctaactgta
acggcctctacagacaacaccatcactctggtgtggggcgtggtccagggccccattgac
cattacaaggtcacctacacttcctcctctggcatcagtactgagttgacggtgcctaaa
gatgtgaccactacgactctggtcgaccttgagcctgggactgagtacacaatcactgtg
gcagcaagaagaggacgacagcagagctctgcagctactatagatgccttcacaggaatc
aggcccgtaacccacctctacttgtcagaggtgacttcagactcagtgtcggtggcgtgg
agcgccccagcaccgcctgctgacctcttcatcctgagctacagctctgcagatgggacc
gacacctctaaggtgacgctggacggctccaagacgaggtcactggttcaggggctgctg
ccgtccactcagtacaccatcagtctaatcacaatacagggggatgttacctctgagccc
attacagcatcactcactacaggcatggacccaccaaaagagatgacggtgtcagatgtg
actgaagacgcagtgactatctcttggatcaaaccactggctccatttgaatactacaag
ctgtcctaccagtcagccagaggtcgagtggacagcgtggtgattgacagcgatgtgacc
aactacaccttgtccagcctgtttcctgctacggaatacgagatcagcctcaacgcagtg
agagggagtcaggagagcaaagtggtcagcacctccgtcttcacagcaatggacatgccg
tcagagttgacagctctcaacatcactccacaaggagccctgctgaggtggaatccacct
gtttccagtgtcgacaactacgtgctgaccctcacacacaaccaggtgacagctgatact
ttcctcgtggagggcaacaagcaggagcaccagctgtccaagctgaagccaagcaccacc
tactctgtagccctctacgccaccaaaggacccctcaccagcggcaccgtcatcaccaac
ctccaaacacccatggacgcacccctgaacctgacggccagtgaagtgaatcaccgcagt
gctctcatctcctggcaaccgccaatcacagaaattgacaactacatgctcacctacaag
tcaaccgacggcagccgcaaggagctgatccttgatgcagaggacacatggatacgactg
gagggactggctgagaccacagagtacaccgtcaagctccaggctgcaagaggacttgac
accagcgccgtagtttccactaccttcaccacagggagtcgtctatttgcaacacctcaa
aactgtgcccagcacctgctgaatggagagatactgagcggagtctacaccatttacatc
aacagggacccgagccagggcgtgcaggtgtactgtgacatgaccactgatgaaggaggc
tggattgtatttcagcgtcgtcagaatggcctgacagacttttccaggaagtggagtgac
tatcgggtcggctttggaaacctggaggacgaattctggcttggtttagacaacatccag
aggattgctgctcagggccgttacgagctgagaattgacatgaaggacggacaggagtca
gtctacgccaactatgacaagttctccattggagatgcaagaaacctctacaagctcagg
ataggagagtacaacggcaccgctggtgactctctgagctaccaccaaggccgacccttc
tctacaaaagacagagacaatgacatcgctgtcactaactgtgccttgtcttacaaagga
gcctggtggtacaagaactgccaccgggccaacctcaacggcaaatacggagagtccaga
cacagtcagggtattaactggtaccactggaaaggccacgagttctctattcctttcgtg
gagatgaagatgaggccattcaacttccgtagcatcagcagcaagaggaggcggtctgcc
cctgtataa
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