Epinephelus fuscoguttatus (brown-marbled grouper): 125902038
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Entry
125902038 CDS
T08419
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125902038 (copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
efo04147
]
125902038 (copa)
Membrane trafficking [BR:
efo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
125902038 (copa)
Exosome [BR:
efo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125902038 (copa)
Exosomal proteins of bladder cancer cells
125902038 (copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WDR55
TPR_COPA_B
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
125902038
NCBI-ProteinID:
XP_049454083
LinkDB
All DBs
Position
LG15:complement(14951066..14965884)
Genome browser
AA seq
1222 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPAEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETE
VRGISGVDLFGASDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSADTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAEALKETFDP
EKETVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGKAGQMAADLDMDAP
GGEGWGDDAELQLDEDGFMDAQEGFGEEGGIKEEGGGWEVEEDLDLPPELDMPAGGGGGA
EDGFFVPPTKGMSPTQMWCNNSQLPVDHILAGSFETAMRLLHDQVGVVNFDPYKSLFMQT
LSRGRTCYLGLPSLPCLRGHPQRNWKDCGAKQGLPAVGLRLSDLIARLQQCYQLTTSGRF
EEAVERFRVILLSVPLLVVDNKQEIAEAQQLITICREYIVGLTMETERKKLPKDTLDQQK
RLCEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPDVAQQTR
KILAACEKTLTDAHQLNYDPHNPFDLCAASFVPLYRGRPVEKCPLSGACYCPTYKGQICR
VTQVTEIGKDVIGLRVSPLQFR
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaaaatttgagacgaagtcggcccgtgtcaaaggcctcagtttccatcccaag
aggccatgggttctcgcaagtttgcacaacggagtcatccagttgtgggactatcggatg
tgcacactgatagacaagtttgacgagcatgatggccccgtcagagggattgatttccac
aaacagcagcctttgtttgtgtctggaggagatgattacaaaatcaaggtgtggaactac
aagttgagacgctgcctcttcactctccttggacacctcgactacatcagaaccaccttc
ttccaccatgagtacccctggattctgagtgcctcagatgaccagactattcgcatctgg
aactggcagtccaggacctgcgtctgtgtgctgacaggccataatcactatgtgatgtgt
gcccagttccatccagctgaggacctagtggtgtcagccagtctggaccagacagtgcga
gtgtgggatatttctggtctgaggaagaagaacctgtctccaggagctgtggagacagag
gtgcgcggcatctctggtgttgacttgttcggtgcctcggatgctgttgtcaagcatgtc
cttgagggtcatgaccgtggggtcaactgggctgccttccatcccaccatgcctctcatt
gtgtctggagctgacgacaggcaggtcaagatctggagaatgaatgaatccaaggcctgg
gagctggatacgtgccgtggtcactacaacaacgtgtcctgtgctgtcttccacccacgc
caggagctcatcctgtccaactctgaggacaagagcatccgggtgtgggatatgtccaag
aggactggagtacagaccttccgaagggaccacgatcgcttctgggtgctgggggctcac
ccaaacctcaacttgtttgctgctggtcatgacagcggcatgattgtgtttaagctggag
cgtgagcgtccagcatacgctgtgcacggcaacatgctgtactacgtcaaggaccgtttc
ctccgccagctggacttcaacagcagcaaggacactgctgtcatgcagctacgcagtggg
tccaagttcccagtgttcagcatgtcttacaaccctgctgagaatgctgtcctgctctgc
actagggcgaccaacctggagaacagcacctatgacctgtactctattcccaaagaaagc
gactctcagaaccctgatgcaccggaggggaagaggtcctctggtctaactgcagtctgg
gtggccaggaacagatttgccgttctggaccgtatgcactctctgctgatcaagaacctg
aagaatgaaattgtaaagaaggtacaggtgccaagctgcgaggaaatcttctatgccggg
acaggctctctgctgctgcgcgatgccgatggtgtcacgctgttcgacgtgcagcagaaa
cgctctctggccactgtaaagattgccaaggtcaagtacgtggtgtggagtgctgacacc
agccacgtagctctgctggctaaacatgccatcatgatttgcaaccgtaagctggagagt
ctgtgcaacattcatgagaacatcagagtgaagagtggagcctgggacgagagtggagtc
ttcatctacaccacctccaaccacatcaaatatgcccttacctctggtgatcatggcatc
atcagaaccctggacctgcccatctatgtgacccgtgtgagaggaaacagtgtttactgc
ctagacagggagtgcaggcctcgtgtcctcaccattgaccccactgagtaccgctttaaa
ctggccctggtcaaccgcaaatatgatgaggtgctccacatggtgcgtaatgccaagctg
gtgggccagtccatcatcgcctacctgcagaagaagggttaccctgaggtggcactgcac
tttgtcaaagatgagaagacacgtttcagtctggctctggagtgtggaaacattgaggtc
gctctggaggcagccaaggccctggatgagcgcagctgctgggagcgtctgggtgaagcg
gcactgctgcagggtcaccaccaggtcgtggaaatgtgctaccagaggacgaagaacttt
gacaagctcaccttcctctacctcatcactggcaacttggccaagctgcgcaagatgatg
aagatcgctgagatcaggaaggacatgagtggtcactatcaggcagctctctacttggga
gatgtcagtgagagggtccgcatcctgaagaactgtgggcaaaagtctctagcttacctg
actgcagccactcatgggctggatgaagaggctgaggcactaaaggagacctttgaccca
gaaaaggagacggtgccagaggttgatcccaatgcacagctgctgcagcctcctccaccc
atcaaccctctcgacaccaactggcctctgctcactgtatcaaagggcttctttgaggga
gctattgcagcaaagggtaaggcaggtcagatggctgccgaccttgacatggacgcccca
ggaggtgagggctggggagacgatgcagagcttcagctggatgaagatggcttcatggat
gctcaggaaggatttggggaagaagggggaatcaaagaggagggaggaggctgggaggtg
gaggaagacctggaccttcctccagagctggacatgccggctggtggaggtggtggagca
gaagatggcttctttgtcccacctactaagggcatgagtcccacacagatgtggtgcaac
aactcccagctgccagtcgatcacatcttggctggctctttcgaaactgccatgagattg
ctccatgaccaggtaggagttgtaaacttcgacccctacaagtcactgttcatgcagaca
ctgtccagaggccgcacctgttacctggggctgccttccctgccctgcctgcgtggccat
ccccagagaaactggaaggactgtggcgcaaagcaaggactgcctgctgtgggcctgcgc
ctctccgacctcatcgcccgcctgcagcagtgctaccagctgactacgtctgggcgcttt
gaagaagctgttgagcgcttcagagtcatcctgctgtctgtacctctgctggtggttgat
aacaagcaggagattgcagaggctcagcagctgataacaatttgtagggagtacatagtg
ggtctgaccatggagacggagaggaagaagttgcctaaagacacattggaccagcagaag
aggctgtgtgagatggctgcgtatttcactcactgtaatctccagccagtccatatggtg
ctggtgctgcgcacagcactgaacctcttcttcaaactgcgtaacttcaagacagctgca
ggctttgctcgacgcctgctcgagctggggccgaagccagatgttgcacagcagacccgc
aagattttggcagcctgtgagaagaccctcacagatgcccaccagttgaactacgacccc
cacaatccattcgacctgtgtgccgcctccttcgtccctctgtaccgtggacgccctgtt
gagaagtgccctctgtctggagcctgctactgtcctacttacaaaggccaaatctgcagg
gtcacacaggtgacagagattggtaaggatgtgatcggtctgcgcgtcagtccccttcag
ttccgctaa
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integrated database retrieval system
