Epinephelus fuscoguttatus (brown-marbled grouper): 125902073
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Entry
125902073 CDS
T08419
Symbol
lmo7b
Name
(RefSeq) LIM domain only protein 7b isoform X1
KO
K06084
F-box protein 20
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125902073 (lmo7b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efo04121
]
125902073 (lmo7b)
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125902073 (lmo7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
PDZ_6
PDZ
LIM
PDZ_2
Motif
Other DBs
NCBI-GeneID:
125902073
NCBI-ProteinID:
XP_049454145
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All DBs
Position
LG2:complement(32436441..32481610)
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AA seq
1341 aa
AA seq
DB search
MYLGREFQRVRAAMEKTLPPQVWWLVLVGGQDVGISRPESVGGSVLAEELRQEVTGKSFG
CNDFRAALENGVLLCDLINQLKPGIIKRVNRLSTPIAGLDNVNVFLKACGKLGLNVSQLF
HPGDLQDLSTRANLRRDESNRRLKNVLITIYWLGRKANLDAFYSGPQLNFKAFEGLLGLA
LSKALDEGSNVFVKDSWFPERTSYKTENSADGTDSLESRVLRPNSDGCGSDAEAEQVFKM
ENTQPSTPQNKGCIQAPLLRGKQGWEANGRGSTSPLSRANQIQVTRERPVQVNPGWIWSK
SLSDIPMVYPVRKVPDGSTIYDVDQDAGMAGEWNQEDKRKCSVAAKDSEAQWHDDLNKWK
NRRRSTKSDLRRKSQDREHVINQMSNGSVTKSESQVGLLKRDQQSPRRHNPAPRPYPTSP
PTKSSSSDLRPHTRALLARSYATEAPFSPTAPLSSHSSPHTQGPSVGAMPASDGNILGEE
THLASLASDGAGVTTPSLDCPFSSQTQVTAQGSPAPTQPTSELAKPENVFTNQISTLTTT
LKPNVTTKSTNTRDPPGSMWSHKELPSCADAVSPPGGDPQEDLSHQSHKSQEEIQKTSAE
PAVEQGRGQQAAGSYKFLSRAGSWSSSASLPRGYRRSEGSSRLSSAITARPFGTKQSRVS
SLPRLCNVDNNQGVLLKSEIEESLSPATKSSLKRQTATAHLETPHQASLTHRQAHQVKQN
GTEQGEEVKAATLSSQISFQTNGYHHQPYTQTQLLPQPYSNQQTHYNKSSTLPSKASVDL
LKVDHSDMRVSLSLKPNSRPDFGFQTHWDSTGARVKYIQPGSPAELCQLCVDDEIVAVNG
VSVAHMNYNQWKDKMTSSLQTGSLTMDIRRYGNKDWSTSEGSHHNQQGQSRVTLNLTTAS
PVLMGYPDHKANSGASTETAVRTVSKFNGQTDNVLQGKVMHGELGDNHKTARSKDFDNIS
RKNQKRRAEFFKEKGGSESAISDLQVPSLSPSSSSWSWDREEDRRRQEKWQEEQERLLQE
QYRRDQERLESEWRRAQQEVKGELYRKSGQNTFEMTNGGERPASAQPHVNGLTNKSREEE
RSPDRNELKVTGSKPQSKAQGEQHDKITEHAWAEDSCGFAQLSPAHRAKSLSTPALAGPH
QQARGDEKKRLGQSASKAEIDRQQILEEMKKRTQLLTDNSWIRQRSSSFYKEPIYVGVPM
KRYESLDNLDIVRQSPLSAATFSYPRPHSAAAGYCAPSRNASSRYSTGALLSQRNTFDSS
HPGRMVSGRRTCCVCERVLGSGAAMVIEALSLCFHLACFQCVGCHRHLGGTETGVQVRIR
KGRPHCEPCYFRLKFPGAPSM
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgtatttagggagagagttccagagggtgagagcagcaatggagaagaccctgcccccc
caggtgtggtggttagtcctggtagggggacaggacgttggcatcagcagacctgagagc
gtgggagggagtgtgctagcggaggagctcagacaggaagtgaccggaaaatcgtttggt
tgcaacgacttccgtgcggccttagagaatggagtcctgctttgcgacttgatcaaccag
ttgaaacctggtatcattaagagagtaaacaggctttctactcccattgctggcctggat
aatgtgaatgtattcctgaaagcctgtgggaaactgggactgaacgtgtctcagctgttt
catcccggagacctgcaggacctctccactcgcgcaaacctcaggcgagatgaaagcaac
agaagactcaaaaatgttctcatcacaatctactggctgggtcgcaaggcaaacctagat
gctttctacagcggccctcagctgaacttcaaagcctttgaggggctgttagggttggcc
ttgtccaaggctctagatgagggcagtaatgtgtttgtgaaagacagctggttcccagag
aggacgagctacaagacggagaactctgcagatggcaccgactctctagagtcccgagtc
ctccgcccaaacagtgacggttgtggaagtgacgcggaagctgagcaggtgttcaagatg
gagaacacacagccctccaccccgcaaaacaaaggttgtattcaggcaccactactccgg
ggaaaacaaggatgggaggcgaatggaaggggctccacaagtccgctctccagagcaaat
caaatccaggtcacacgtgagagaccagttcaggtcaaccctggctggatttggagcaaa
tcactcagcgacatcccgatggtttaccctgtgcgtaaagttcctgatgggagcaccatt
tatgatgtggaccaggacgctggcatggcaggagagtggaatcaagaagacaaacgcaag
tgtagcgttgctgccaaggacagtgaagctcagtggcacgatgacttgaataagtggaag
aatcgtcgcaggagcaccaagtctgacctccgcaggaagtcccaagacagagagcatgtc
attaaccagatgtccaatgggtctgtgactaagagtgaatcacaagttggactgctaaag
agagaccagcagtcaccacgcagacataaccctgcccctcgtccttaccccacctctccc
ccaacaaaatcatccagctctgatctccggccacatactcgggctctgctggcccgcagc
tacgccacagaggcacctttcagccccacggctccactgagctcccacagctcacctcac
acccagggaccgtcagttggagccatgcctgcctctgatgggaacatcctgggagaggag
acccaccttgcctccttggcctcagatggagcaggagttaccacaccttctctggactgc
cccttcagctcccagactcaagtcacagcacagggcagcccagctcctacccagccaaca
tctgaactggctaagcctgaaaatgtttttacaaaccaaatctccaccctgaccacaact
ttaaagccaaatgtgaccacgaagtcaaccaacaccagggatccacctggatccatgtgg
agtcacaaggaacttccatcctgcgctgacgctgttagtccgccaggaggtgatcctcag
gaggacttgtcccaccagagccacaagtctcaggaagagatccagaagacatcagcggaa
ccagctgtggaacaaggcagaggccagcaggctgcaggctcttataagttcctctccaga
gctgggtcgtggtccagctcagccagccttcctcgtggttaccggaggtccgagggctcg
tctcgtctctcctctgcaatcacagccaggccctttgggaccaaacagtccagggtgtcc
tcacttccgagactgtgcaatgtcgacaacaaccagggtgtgctgctgaaaagtgagata
gaggaatctctctctccagccaccaaatcttccctcaagagacagactgcgaccgcccat
ctggagactccacaccaggcttcactcacacacaggcaagctcaccaggtgaagcagaat
ggcacagagcagggagaggaggtgaaagctgccactctctccagccagatctccttccaa
accaatggctaccaccatcagccctacacccaaacccagctactaccacagccttattcc
aaccagcagacccactacaacaaaagctcgaccctgccatctaaggcaagcgttgacctc
ctgaaggtggatcacagtgacatgagagtgagcctgtctctaaaacccaacagcagacca
gactttggtttccagactcactgggactccaccggggcgagagtcaagtacattcaacct
ggcagtccagcggagctttgccagctgtgtgtggacgatgagattgtggctgttaatgga
gtttcggtggcacacatgaactacaaccagtggaaggataaaatgacatcttccctgcag
accggcagtctgaccatggacattcggcgctatggcaacaaggattggagcaccagtgag
gggagtcatcacaaccagcagggccagagcagggtgaccctcaatctgactaccgcatcg
cccgttctgatgggctaccctgatcacaaagccaacagtggtgcctctacagaaaccgca
gtcaggacagtgtccaaattcaatgggcagacagacaatgttttacagggcaaagtcatg
cacggagagctcggtgacaaccacaagacagccaggagtaaagattttgataatattagt
aggaaaaatcagaaaaggagggctgaatttttcaaagagaaaggaggctcagaatctgca
atatctgatctccaggtgccatctctcagcccctcctcatccagctggtcgtgggaccgc
gaggaggatcgaaggcgtcaggagaagtggcaggaagagcaggagcgcctcctacaggag
caatacaggcgggatcaggagaggcttgaatcagaatggcggagagcacaacaagaagta
aagggggagctatacaggaagtcagggcagaacacatttgagatgaccaatggaggtgag
agacctgccagcgcccagccacacgtgaatgggttgacaaacaaaagcagagaagaggag
cggagccccgacagaaatgagctgaaagtgacgggatcaaaacctcaaagtaaagcacaa
ggagagcagcatgacaagattactgagcacgcctgggctgaagactcctgtggctttgct
cagctgtctcctgcacacagggcaaagtccttatctaccccagcattagctggcccccac
caacaggcacgaggtgatgagaaaaaaagactaggacagtccgcatctaaggctgagata
gacaggcagcagattctggaggagatgaagaaaaggactcagcttctgaccgacaacagc
tggatacgtcagcgcagcagcagcttttacaaagaaccgatctatgttggggttcccatg
aagaggtatgagtctctggacaacctggacattgtgcgtcagtccccgctctcggccgct
acgttcagctaccctcgtccacactcagctgcggcaggttactgcgctccgagtaggaac
gcctcttcccgctacagcactggagcactgttatcccagagaaatacatttgactcctct
catcctggcaggatggtcagtggcaggaggacttgctgtgtgtgtgagcgtgtcctgggt
agtggggcagccatggtcatagaggcccttagtctctgcttccacctcgcctgtttccag
tgtgtgggctgccaccgacatctcggaggaactgagactggagtccaggttcgaatccga
aaagggaggccccactgtgagccctgctatttcagactcaagttccctggtgccccctcc
atgtga
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