Epinephelus fuscoguttatus (brown-marbled grouper): 125902124
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Entry
125902124 CDS
T08419
Symbol
cdh16
Name
(RefSeq) cadherin-16
KO
K06810
cadherin 16, KSP-cadherin
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
125902124 (cdh16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efo04515
]
125902124 (cdh16)
Cell adhesion molecules [BR:
efo04515
]
Cadherins
Major cadherins
125902124 (cdh16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Ig_CLSTN
Ig_Cad99C_N
Cadherin_CELSR2_9th
RET_CLD1
Big_9
REC-like_halo
InlK_D3
Protocadherin
Motif
Other DBs
NCBI-GeneID:
125902124
NCBI-ProteinID:
XP_049454227
LinkDB
All DBs
Position
LG2:complement(32192437..32229594)
Genome browser
AA seq
824 aa
AA seq
DB search
MADRGATTMLIIALILVILYTFAPCSGANVKIGVPENYDGIFPWYLAKLNSLPDNYSDLV
VTGDDEGIFGVDAQFLYAQKPLDREKQPSYSLQVSFRTSEQHRQSFTVEVCVNDKNDNVP
TFIEESMRGSVQLGLLKGIPFMQVEALDRDDRNTAHAELRFSLMEQTPRIPSSQMFFIDS
ITGEVSLTEEGASALDPEMCGRYKLLVMVKDMAGRANAFFTTGLVTVEVTGNTWASPDPV
RLQENLPGPYPIPISQVKWSGSQAEYSLEGEFPEMLFTISREGVIYLNAPLDRETQDQFQ
ISIVVERPDGREIAKPVELRVMVGDANDNRPTFPQAQYHTVVKELAARGTEILTVQAADN
DDPKTDNVRIFYRLVGQIPESPRALFRVDRDSGVISVQADSMEGTAPQYTLTITAEDAKG
LNSSCTVVVTVQDENNNPPVFSQHEYGPFHIPEDAPVGTTVTAVLAGDADVRGGDSWQVD
YRLESGNEEEAFTLVTDKQTNEVSLILSKVLDFERESEYILVLSAQNPVALVRGRYGPAS
TATVSIYVDDVNEGPILSQSHYEVTVREGEEPGRVIATIRGYDPDSHPIRYSLQGDTKKY
FSIGKYSGELKTVQALDREENSTYTMEVIAVDGRNSSLSASTLVTVQILDVNDNSPVLVG
DYSWKYLCTPRWEDQALVLASRDSDGPQHGGRLNFSLRSDATVRRNWKLTPINDTHTNLS
LNIPYLAPEVYTVPFTISDSSSPPRSTFINLPVTVCPCNVRGNCKMAAKQLEGMPTIQSA
VGILLGTFAVIGTILIVVFVRLSYQNPKEPSKTNQERVPLKISI
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagaggcgctacgacaatgctcatcatagctctcatattggtgatactttac
acttttgcaccatgctctggagcaaatgttaaaattggtgtccctgaaaactatgacggc
attttcccatggtatctagccaagctcaacagcctgccagataattacagcgacctggtg
gtgacaggggatgatgaggggatattcggagtcgacgctcagtttctgtacgctcaaaaa
ccactggacagagagaaacagccatcttactctcttcaggtgtccttcagaacatcagag
cagcaccgtcagagctttactgtcgaagtgtgtgtcaacgacaagaatgacaacgtgccc
actttcatagaggagagcatgagaggcagcgtgcagctcgggcttctcaaagggatccca
ttcatgcaagtggaagcgctagatcgtgatgaccgcaacaccgcccacgccgagctgcgg
ttcagcctcatggagcagacacccaggattccctccagccaaatgttcttcattgactcc
atcaccggagaggtttctctcactgaggaaggagcctctgctctggaccccgaaatgtgc
ggccgatacaagctcctagtgatggtgaaggacatggccgggagggcgaatgccttcttc
accaccggccttgttactgttgaggtgacaggaaacacctgggcatcgcctgaccctgtg
cgactccaggagaacctcccaggcccgtaccccatccccatctcacaggtcaaatggagt
ggaagtcaggcagagtacagtctggagggggagtttccagagatgctcttcaccatcagc
agagaaggagtcatttatctcaacgcccctctggacagagagacacaggaccagttccag
atcagcattgtggttgagcgtccagatggcagagagattgccaagcctgtggagctgaga
gtgatggtgggcgacgccaatgataacagacccacctttccacaggcacagtaccatact
gtggtgaaagaactggctgctcgagggacagaaatcctgacagtgcaggcagccgataat
gacgatcccaagacagacaacgtgcggatcttctaccgtttagtcggacaaattccagag
agtcctcgtgccctcttcagagtggaccgtgactcaggggtcatctctgttcaagcagac
agtatggagggcacagcacctcagtacaccctcaccatcactgctgaggatgccaaaggt
cttaacagttcgtgcactgtggttgtgacggtgcaggatgagaacaacaacccaccagtc
ttctcccaacacgagtatggaccatttcacattccagaggacgctccagtgggcaccacc
gtaacagctgtgctggcaggggatgcagatgttcggggaggagacagctggcaggtggac
taccgtttagagtctggaaacgaggaggaggcctttacattagtgactgacaagcagacc
aatgaggtctcactcatcctgtcaaaggtcttggactttgagcgtgagagtgagtacatc
ctcgtgctcagcgctcagaacccagtggctcttgtccgaggccgatacggacctgcatcc
acagcaaccgtctccatctatgtggatgatgtaaatgaaggtccaatcctgtctcaaagc
cattatgaggtgactgtcagggagggcgaggaaccaggacgggttatcgctaccatccga
ggttacgaccctgattctcatccaatcagatactctcttcaaggagacaccaagaaatac
ttttcaatagggaagtattctggtgaactgaagactgtgcaggccttggacagagaggag
aacagcacatacaccatggaggtcattgcagtggatgggcgaaactcttccttatctgcg
tccaccctggtgacggtccaaatcctggatgtgaacgacaacagtccagtgctggttgga
gactactcctggaagtacctgtgtacgcctcgctgggaggaccaagctctggtgctggcc
tcgcgggacagtgatgggccacagcatggaggaagactcaacttctccctgcgcagtgac
gccacagttcgacggaactggaagctgacacctattaatgacactcacaccaacctgtcc
ttaaacatcccatacctggcccccgaagtgtacactgtgcccttcaccatctctgacagc
agctcgcctcccaggagcaccttcataaacttgccagtgacagtgtgtccctgcaacgtc
agagggaactgcaaaatggctgccaagcagctggagggcatgccaactattcagtctgca
gttgggattctgctcggcacctttgcagtcataggaacgatcctaattgttgtgtttgtg
agactctcctaccagaaccccaaagagccgagcaaaactaaccaggagagagttcctctt
aagatttcaatctaa
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