Epinephelus fuscoguttatus (brown-marbled grouper): 125902812
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Entry
125902812 CDS
T08419
Symbol
shhb
Name
(RefSeq) tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125902812 (shhb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
efo01002
]
125902812 (shhb)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
efo00536
]
125902812 (shhb)
Peptidases and inhibitors [BR:
efo01002
]
Cysteine peptidases
Family C46: hedgehog family
125902812 (shhb)
Glycosaminoglycan binding proteins [BR:
efo00536
]
Heparan sulfate / Heparin
Morphogens
125902812 (shhb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Hom_end_hint
Hint_2
DHQS
Ribosomal_S6e
DUF6212
Motif
Other DBs
NCBI-GeneID:
125902812
NCBI-ProteinID:
XP_049455392
LinkDB
All DBs
Position
LG15:complement(4990428..4995722)
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AA seq
410 aa
AA seq
DB search
MVLMRVMLSVSLCLLLTSIASGCGPGRGYGKRRHPKKLTPLALKQFIPNVAEKTLGASGK
YEGKITRNSDRFKDLTPNYNPDVIFKDEENTNADRLMTQRCKDKLNSLAISVMNQWPGVK
LRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYESKAHI
HCSVKAENSVAAKSGGCFPGSSIVILADGRTKPLKELQVGDKVLTADQQGNVVPSDFLMF
MDQDRQIIREFHVLETDEPRCRLTLTPAHLVFVMNSNSTNSRDIKAVFASDVKLGQRLLV
VGKYQPDRLIPARVTRIHVENYRGSYAPVTSHGTIIVDWVLASCYAVVEDHDLAHWVFVP
VRLWCSFLSLVGMVKELSSVYQTDGVHWYPELLHHVGSWILDSSSFHPQS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgatgagagtgatgctgtcggtgtctctctgcctgctgctgacgtccatcgcc
tcgggctgtggaccgggcagggggtacggaaagcggaggcacccaaagaagctgacaccg
ctggctctgaaacaattcatccccaacgtggcagagaaaaccctgggagccagcggcaag
tacgaaggcaagatcacgcgcaactcggacaggttcaaggacctgactcccaactacaac
cccgatgtcatttttaaggatgaggaaaacaccaacgcagaccgactcatgacacaaagg
tgtaaggacaaactgaactctttggctatttcagtcatgaatcagtggcccggggttaaa
cttcgagtcacagagggctgggatgaggacggccatcactctgaggagtctttgcactat
gagggcagagcggtggacatcaccacctcagaccgggacaagagcaagtatggcatgctg
tccaggctggctgtggaggcgggctttgactgggtctactatgagtccaaagcccacatc
cactgctctgtgaaagcagaaaactctgtggcagcgaagtctggaggttgcttccctggt
tcgtccatcgtgatcctggcagacggacggactaaaccactgaaggagctccaggtggga
gacaaggtgctgactgctgaccaacaaggaaatgttgttcctagtgactttctcatgttc
atggaccaggaccgacagattatcagagagttccatgtcctggagactgacgagcctcgt
tgcagactgacactgactccagctcaccttgtctttgttatgaacagcaacagtaccaac
agcagggacattaaggccgtgtttgccagtgatgtaaagctaggacagcggcttcttgtt
gttgggaaataccagcccgaccgcctcattcctgcaagagtgacaagaattcatgtggag
aattatcgagggtcttatgcgcctgtaacgtctcatggaaccatcatagttgactgggtt
ttggcgtcttgctatgcagtggttgaagatcatgaccttgcacactgggtttttgtgcca
gtccgactgtggtgctcattcttgtcgctggttgggatggtgaaagagctcagcagtgta
taccaaacagatggagtccactggtacccagagctcctccaccatgtgggaagttggatt
ttggacagtagttcttttcacccacaaagctga
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