Epinephelus fuscoguttatus (brown-marbled grouper): 125903003
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Entry
125903003 CDS
T08419
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
125903003 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
efo03036
]
125903003 (ercc6)
03400 DNA repair and recombination proteins [BR:
efo03400
]
125903003 (ercc6)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
125903003 (ercc6)
DNA repair and recombination proteins [BR:
efo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
125903003 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
125903003
NCBI-ProteinID:
XP_049455535
LinkDB
All DBs
Position
LG16:complement(22533778..22550696)
Genome browser
AA seq
1451 aa
AA seq
DB search
MPVDGSEDQVPSSLSSPASAALTPGGSEEDGATGGSAVNSFPDNSQGSEAASAYPVNTGP
GEGSSGGKRSGALLQIDRQRIQAASASSGADELQGLGVAVYDQDVLEQGVLQQVDEAIQE
ASHAAAKAEAEKEYQSVLDDVRSVTASLKQINKIIEQLSPYAASSKDISRKIESVKRQKE
NKEKQLKKVKAKQKRLQAILGGEDVARVEAELLAEGDDEEEEAGPSTLGSMLMPAQETEW
EELIRKGHMTPFGTRIPQKEEKKEPRKVMLAENSAFDLYLADQAKIATERKRLPLLKKKM
SSGLSPGVEARGKTNKKVSSSKDKKMKKRMRKLQITALKAHPKARPKIEPQLPKPKKKCH
IEGEETDSEESEYLPSDEGIDPDQEEREAMEEGFGEDDDEEYELKPYKQKSEKKARKKIK
KREESEEEYYPESSDGEEGVKGKNKKNKDDGDVKYYRQRIRRWKRQRLREREEKRERGEF
TDDSDEEFDEGFKVPGFLWKKLYKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQIISF
LAGLSYSKLRTRGSNYRYVGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSFTS
NKQKLIPEIAACHGILITSYSAVRNMQDILQRYDWHYIILDEGHKIRNPNAGVTTACKQF
RTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQ
TAFKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEDQRQVYQTFLDSKEV
YQILNGDMQVFSGLIALRKICNHPDLFSGGPRILRGIPEDQLTKEEHFGYWKRSGKLIVV
ESLLRLWFKQGHRVLLFTQSRQMLDILEVFTMENNYSYLKMDGTTTIASRQPLIARYNED
KSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQTQQVTVYRLLT
AGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLADPDGAQGTETSAIFAG
TGSDVKAPKKLQRPRPSHTVNHSSNKHKHSSANQNETGADSRQSAANIPTLRDGNTSQRS
KNSPGKPNGLTDSQSTDRNGLDAEPNISANTQRTGQNNRDWDAAKPAVKNSNSSSSHQHT
DKDSALTSPQKHREKRKHCDSADSDKHKHKRHKHSKDSRFEGHRISHLVKKKTYEKAEDE
DEAQKKSDDYVLAKLFKKSGIHSVMQHDTIMESSNPDYVLVEAEANRVAKDALKALKVSR
QQCRLVLNRPPPPPARKRFGQKNNSLLVAPSVQSAANPGKCKDAAIVKKSVSKKPGSGAH
FSGEGMEGDSASAPLSSSSLLAKMKARNHLSMPSSQREDTEEEEDSSGAPVRSSPPAPPT
EHDELLVDVRNFIAFQANVDGQATTQEVLEYFKPRLTESQAPVFRELLRSICDFQRTSGQ
EGMWRLKESFR
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtagacggttcagaggaccaggtgccctcctctctctccagccctgccagtgct
gccctcaccccgggagggtctgaggaagatggggccacagggggctcagctgtcaactct
ttccctgataacagtcagggctccgaggctgcttcggcctatcctgtcaacactggacct
ggggagggcagcagtggtggtaagaggtctggagccttgctgcagattgaccgacagcgt
atccaagcagcatctgccagttctggggctgatgaactccagggccttggtgtggctgtg
tatgaccaggacgtccttgagcaaggtgtcttgcagcaagtggacgaggcaatccaggag
gccagtcatgctgctgctaaagcagaggcagagaaagagtaccagtctgtgctcgatgat
gtcaggtccgtcacagcatctctgaaacaaataaacaagattattgagcagctgtctccc
tatgctgcctccagcaaagatatcagtaggaagattgaatctgtcaaacgacagaaagaa
aataaggagaaacagctgaagaaagtcaaagccaaacaaaagcgacttcaggccattctg
ggaggagaggatgttgcaagggtggaggctgagcttctggcagagggtgatgatgaagag
gaagaagccgggccgtccacactgggcagcatgctcatgcccgctcaggagactgaatgg
gaggagttaatccggaaaggtcacatgactccttttggaacccgaatcccgcagaaggag
gaaaaaaaggagcctcgaaaagttatgcttgctgagaactctgccttcgacctgtacttg
gcggaccaggccaagattgctactgagaggaagagactccctcttcttaagaagaagatg
agctccggactcagccctggtgtagaggccagggggaaaaccaacaaaaaagtttcctct
tccaaggataaaaaaatgaagaagcgtatgcgaaaactccagataactgctctaaaggcc
catcctaaggctcggcccaagattgagccacagctccctaagccaaagaagaagtgtcac
attgagggagaggagacggacagcgaggagtcagaatacctgcccagtgacgaaggcata
gatcctgaccaggaggaaagagaagccatggaggagggctttggggaggatgatgatgag
gaatatgagttgaaaccatacaagcaaaaaagtgagaagaaagcgaggaagaaaataaag
aaaagagaggagagcgaggaagaatactaccctgagagttcagatggagaggagggcgtg
aagggcaaaaacaagaaaaacaaagatgacggagatgtgaaatactacagacagagaata
aggaggtggaagcgacagcgtcttcgagaaagagaggagaagagagaaagaggcgagttt
acagacgacagtgatgaagaatttgatgaaggcttcaaagtgcctggtttcctctggaaa
aaactttacaagtaccagcagacaggtgtgcggtggatgtgggaactccactgtcagcag
gcaggtggcatcctgggagatgagatgggattgggcaaaaccatccagatcatcagcttc
ctggctggactgagctacagcaaactgaggacgagaggatccaactacaggtatgttggt
ctgggtccgacagtcatcgtgtgcccggccacagtcatgcaccagtgggtaaaggagttc
cacacctggtggcctcctttcagagtggctgttctgcatgaaaccggctcgttcaccagc
aacaagcaaaagcttattccagagatagcggcgtgtcatgggatcttgataacctcatat
tcagctgtgaggaatatgcaagacatcttgcagcgctatgattggcactatattatactg
gatgagggccataagatcaggaatccaaatgctggagttaccactgcctgcaaacagttt
cgcactccccacaggttcatcctgtcaggctctcccatgcagaacaacttgaaggagctg
tggtctctgtttgactttgtcttccccggtaaactggggacattacccgtctttatggag
cagttctctgtgccgatcaccatgggaggatacagtaacgcctcgcctgtacaggtccaa
acagcatttaagtgcgcatgcgtgctgagagacactataaatccttacctgctcagaaga
atgaaagcagacgtcaaggccaacctctccttacctgacaaaaatgaacaggttctgttt
tgcagattaacagaggaccagcggcaggtttatcagaccttcctagattccaaagaggtc
taccagatacttaacggggacatgcaggtgttctctggtttgatagctctacgcaagatc
tgtaaccaccccgaccttttctcgggcggccctcggatactgaggggaatcccagaggac
cagctaactaaggaggaacactttggctattggaaacgctcgggcaagctgatcgtggtg
gagtctctgctgcgactctggttcaaacagggccacagagtcctgctcttcactcagtca
agacagatgttggacatcttggaggtattcacgatggagaataactactcatacctgaaa
atggacggcactaccacaatagcttcccgacagcccctcatcgctcgctacaacgaggac
aaatccatttttatcttcttgttgaccactaaagttggaggtctgggagtcaatctgact
ggagccaatagagtcatcatctatgacccagactggaaccccagtactgacacacaggct
cgggagcgagcatggagaatcggtcagacgcagcaagtgacagtctacagactgctgact
gcagggaccattgaggagaaaatctaccacaggcaaatcttcaaacagtttctgaccaac
cgcgttctgaaggaccccaaacaaagacggttcttcaagtcgaatgacatttatgagctc
ttcactctggctgaccccgatggagctcagggaacagagaccagtgccatatttgcaggt
acaggctctgatgtcaaggcacctaagaagcttcagaggccaaggccatcacacacggta
aaccatagcagcaataaacacaaacactcctcggcaaaccagaatgaaaccggtgcagac
agccgacagtctgcagcaaacattcctacattaagagatggaaacacttctcagcgcagt
aaaaactctccgggtaaaccaaatggcctgacagacagtcaaagcaccgaccgaaatggt
ctggatgcagagccaaatatttcagcaaatacacagcgtacaggacaaaataacagagac
tgggacgcagccaagccagcagttaaaaactcaaactcatccagttctcaccaacacaca
gacaaagactctgccctgacaagcccacagaaacacagggaaaagaggaagcactgtgac
tcagctgactcggacaaacacaaacataagaggcataaacactccaaagattctcggttt
gaaggccatcgcatctctcatttggtgaagaaaaagacctatgagaaagcggaggatgaa
gatgaggcacagaagaaatcagacgattacgttttggcaaagctcttcaaaaaatctggt
atccacagtgtgatgcagcatgacaccatcatggagtcctctaaccctgactatgttcta
gtggaggcagaagctaatagggtggctaaagatgccctgaaagcacttaaggtttctcgc
cagcagtgtaggctggtcttaaatagaccccctcctccacctgcaaggaaacggtttgga
caaaagaataattctctcctggttgcaccttctgttcaatctgccgccaatccaggcaaa
tgcaaggatgctgctattgtaaagaagtctgtgtcaaagaagcctggttcgggcgctcat
ttcagcggagaagggatggaaggtgactcagcctccgccccactctcctcctcctccctg
ctggccaagatgaaagcccggaatcacctcagcatgccctccagccagagagaagacaca
gaagaagaggaggacagctccggggctccagtaaggagctcccccccggctccgcccacg
gagcatgacgagctgttggtggatgtgcgcaacttcatagccttccaggccaatgtggac
ggacaggctaccacccaggaagtgctggagtatttcaaaccaagactgactgagagtcag
gcgcctgttttcagagagctgctcaggagcatctgtgacttccagaggacgtctggtcag
gagggcatgtggagactgaaggagagcttccgctga
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