Epinephelus fuscoguttatus (brown-marbled grouper): 125903023
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Entry
125903023 CDS
T08419
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04010
MAPK signaling pathway
efo04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125903023 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
125903023 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125903023 (nfkb2)
Transcription factors [BR:
efo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
125903023 (nfkb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
ZK643_helical
Motif
Other DBs
NCBI-GeneID:
125903023
NCBI-ProteinID:
XP_049455564
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All DBs
Position
LG16:complement(1203289..1233834)
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AA seq
924 aa
AA seq
DB search
MAGALRMTEAQFINVYDNDLQMNLMQYDYIPPVDIKTEPYIPETAHGPYIQIIEEPKQRG
FRFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYMGHARVEVQLVTHTDPPRVHAHSLV
GRHCTENGTCTLDVGPNDLTASFSNLGILHVTKKGVVDVLSRRLREERKRQKGAHYHLTE
AEEHSILKEAKELGKAMDLNIVRLKFTAYLQDSNGGFTRGLKPVVSNCIYDSKSPNASNL
KISRMDKTCGSVLGGDEIFLLCDKVQKDDIEIRFYEEDDEGGWEAFGDFSPTDVHKQYAI
VFKTPPYHSAEIERPVTVFLQLKRKKAGDSSDPKQFTYIPQVQDKEEVLRKKQKPLPHYE
AWRGGGGGGGGRGGGAGGFGGGGGAGGAGGAGGGGGFQFNQQMNGGGGGGGTGGVFFPGG
FTGFGGGAQMSGSAPQTGVTQQQTEGETGGHTGGHTGGQTGGQTGSPLQQQLFQLAAALH
SRASQSARQTAAALLQYCSTGDVRVLLAIQRHLCGVQDGNGDTPLHLAIIHQQTGVIQQL
IHTLLSSQQQNILNTANHLRQTPLHLAVITRQVKVVEVLLRAGADPSLLDKDGRSPLHLA
ALAGDNATLRPLLAHLGERHAHLVNTPDFHGLHPLHLAVRRDGERCLRLLVEGGAKINAP
EQKSGNTALHLAVRENLFKVACTLITELKADVNASTFGGNTPLHLAASLGSPTLCSMLIA
AGADKNVENDEPLFFSSSSDEEQDEDEPIREQEATSQPINPRKRPAGGHTPLDLAKCQKV
RNLLNSRQSPKSSRHSSKKMKPSSSEEAEASGLDEDTLSRLVEVLSVGDVPWRKLAEKLG
MMTLTHLYMDSPTPCHHLLQHYQLGGGAVEGLVDALQSLGLTEGVRLLRHAELRDDKHST
DATVDSGFGSQPMEEEEEPPVANQ
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagctctaaggatgactgaagctcagttcatcaacgtctacgacaacgacctg
cagatgaatttgatgcagtacgactacattcctccagtggacataaagactgaaccctac
atacctgagacagctcatggtccctacattcaaatcatcgaggagccaaaacagaggggc
tttcgtttccgttatgagtgtgagggtccgtcccatggcgggctcccaggggcctccagc
gagaagaacaggagaacctacccgaccgtgaagattaataactacatgggtcacgcccgg
gtggaggtccagctggtgacccacaccgaccctcctcgtgttcacgctcacagtctggtg
ggacgtcactgcaccgagaacggcacctgcacgctcgacgtcggccccaacgacctcacc
gcctcattcagtaacctggggatcctccatgtgaccaagaaaggtgtggtggatgttctg
agccgaagactgcgagaagagaggaagagacagaagggagctcactatcacctgacagag
gcggaggagcactccatccttaaggaggccaaggagctgggtaaggcgatggacctgaac
atcgtcaggttaaagttcaccgcctacctgcaggacagtaacggaggcttcaccagaggg
ctgaaacccgtcgtctctaactgcatctacgacagcaagtcaccaaacgcctccaacctg
aagatctctcggatggataagacatgtggctcagtgctcggaggagacgagatcttcctg
ctctgcgacaaagtccagaaagatgacattgagatccgtttttatgaggaggatgatgaa
ggaggctgggaggcattcggtgacttctcacctacagacgtccacaaacagtacgccatc
gtcttcaaaacaccgccctaccacagtgcagagatcgagcggcccgtcaccgtcttcctg
cagctgaagaggaaaaaggctggcgacagcagcgaccccaaacagttcacctacatacca
caggtccaagacaaagaggaggtgctgaggaagaaacagaagccgctgcctcactatgaa
gcctggagaggaggaggaggaggaggaggaggaagaggcggaggagctggaggatttgga
ggaggaggaggagctggaggagcaggaggagcaggaggaggaggaggattccagttcaac
cagcagatgaatggaggaggaggaggaggaggaaccggcggagtcttcttcccgggaggc
ttcacaggcttcggcggaggggctcagatgtcaggctccgcccctcagacaggggttacc
cagcaacagacagagggagagacaggaggacacacaggaggacacacaggaggacagaca
ggaggacagactggctcaccactacagcagcagctgtttcagctcgccgccgccctccac
agccgagcctctcagagcgccagacagacggctgccgccttgctgcagtactgcagcacc
ggggatgtccgcgtccttctggcaatccagagacacctctgtggcgtccaggacggcaac
ggagacactcctttgcacctggccatcatccatcagcagacaggtgtgatccagcagctg
atccacactctgctcagcagtcagcagcagaacatcctcaacacggccaaccacctccga
cagactcctctccacctggcggtgatcacccggcaggtgaaggtggtggaggtgctgcta
agggcgggggccgaccccagcctgctggacaaagatggccgcagtccgctccacctggca
gcgctggctggagacaacgccacgctccgccccctgctggctcacctgggagaacgtcac
gcccacctggtcaacactccggacttccacggtctccatcctctccacttggcggtgagg
cgggacggcgagcgctgcctccgcctcctggtggagggcggagccaaaatcaatgcacct
gagcagaagagcggaaacaccgccctccacctggctgtgagggaaaacctgttcaaggtg
gcctgcactctcatcacagagctgaaggccgacgttaacgccagcacgtttggaggaaac
acacctctgcacctggccgccagtctgggctcaccgaccctctgctccatgcttatcgct
gcaggtgctgataaaaacgtggagaacgacgagccgctcttcttcagctcctcctcggac
gaggagcaggacgaagacgaaccaatcagagagcaagaggccacctcacagccaatcaac
cctcgcaagagaccagcaggaggacacacacccctggacctcgccaaatgccaaaaggtg
aggaacctgttaaactccagacagagtccgaagtcaagtcgtcacagcagtaagaagatg
aaaccgagcagctctgaagaggcggaggcgtcggggctggacgaggacacgctgtcccgg
ctggtggaggtcctgagtgtcggagacgtcccctggaggaaactggcggagaagctgggg
atgatgacgctgactcacctgtacatggacagtccgacgccctgccaccacctgctgcag
cactaccagctgggtggaggtgcagtcgaaggtctggttgacgctcttcagtctctcggt
ctgacagaaggagtccgactgctgagacacgccgagctacgagacgacaaacacagcaca
gacgccacggttgacagcggcttcggcagccagccaatggaggaggaggaggagcctcct
gtggccaatcagtga
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