Epinephelus fuscoguttatus (brown-marbled grouper): 125903225
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Entry
125903225 CDS
T08419
Name
(RefSeq) vinculin-like isoform X1
KO
K05700
vinculin
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04510
Focal adhesion
efo04520
Adherens junction
efo04810
Regulation of actin cytoskeleton
efo04820
Cytoskeleton in muscle cells
efo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125903225
04520 Adherens junction
125903225
09142 Cell motility
04820 Cytoskeleton in muscle cells
125903225
04810 Regulation of actin cytoskeleton
125903225
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125903225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
efo04812
]
125903225
04147 Exosome [BR:
efo04147
]
125903225
Cytoskeleton proteins [BR:
efo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125903225
Exosome [BR:
efo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125903225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
STX6_10_61_N
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
125903225
NCBI-ProteinID:
XP_049455960
LinkDB
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Position
LG16:22827226..22862822
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AA seq
1125 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTVPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENSSSKLVQASQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLINSMNTIKELLPVLISAIKIFVATKSSRGAGLEEAERNRRFTFEKMSAE
INEIIRVLQLTTWDEDAWANKDMEALKRCLALIESKMAQAKSWLKDPHGQPGDPGEVALR
VILDEAGKVGELCAGKERKDILATAKALGQMTDQIADLRARGQGPTPGCVQRAGQCSQGL
DLLFGKVDGAARRLEALINAKQAIARRLDAAQAWLADPNGGPEGEENIRALLAEAKRIAD
LCEDPKERDDILRSISEIAGLTARLVELRKQGKGDSPEARALAKQIGAALLTLQSKTNRA
VANMRPAKPAVTLEGKMEQALRWVNNPGVDDRGVGQAAIRGMVGEGKRLAGSLLGPYRQD
MIGRCDRTEALMASLADMAGRGEAEAPHARATAAQLQDSLKDLRQHMQEVMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNREEVFEERAGNFETHAGRLGATAEKAAAVGTANKSTVEG
IHAAVKHARELTPQVTCAARILLKNPGNKAAYEHFDTMKNQWIDNVERLTGLVDEAIDTK
SLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPRFR
DTVKHASDILSHTISPMVMDAKAVAGNIQDKALQKAYLDSCLRILASVGKVREAFQPQEP
DFPPPPPDLDQLHVSDEQAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVLSEPMMV
AARQLHDEARKWSSKPEDEEAVEEREVDDEDEFTDGEDDYEPELLMMPSNQPVNQPILAA
AQSLHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDEV
TRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQATE
MLVHNAQNLMQSVKETVREAEAASIKIRTDAGCTLRWVRKTPWYQ
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacaccaagaccatcgagagtatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggagggggaggtggacggtaaagccatcccagatctg
acggtaccggtggccgcggtgcaggcggcagtcagcaaccttgtgcgggtggggaaggag
actgttcaaaccaccgaggaccaggtgatgaagagagacatgcctcctgcgttcattaag
gtggagaactcgagctccaagctcgtccaggcgtctcagatgctaaaggcagatccatac
tctgttcctgcacgagactacctgatcgatggatccagagggatactgtctggaacgtcc
gacctgctccttacttttgatgaggcagaggtgcgtaagataattcgtgtgtgcaaaggc
atcctagagtatctgacagtggctgaggtggtggagaccatggaggacctcatcacttac
accaagaacctgggaccagggatgaccaaaatgtcaaagatgattgaggagaggcagcag
gagctgacgcaccaagaacacagacagatgctaataaactccatgaacactatcaaagag
ctgctgcctgttcttatatcagctataaagatttttgtggcaaccaagagcagtcgaggt
gccggccttgaggaggcagagaggaacagacggtttacctttgaaaagatgagcgctgaa
atcaacgagatcataagagtcttacagctcaccacgtgggatgaagacgcctgggccaat
aaggacatggaggctttgaagagatgtctggctttgattgagtcaaagatggcacaagct
aaaagctggctcaaagaccctcatggacaaccaggagaccctggtgaggtcgccctgcgt
gtgatactggatgaagccggtaaggtgggagagctgtgtgctgggaaggagaggaaagat
atactggcaaccgccaaggctctgggacaaatgaccgaccagattgcagatctacgagcc
agaggccagggcccgaccccagggtgtgtgcagcgtgcaggccagtgctcacagggctta
gacttgttatttggcaaagtggacggtgctgcccgcagactggaggctctaatcaatgcc
aagcaggccattgccaggaggctggatgctgcgcaggcctggctggccgatcctaacggt
ggtcctgagggggaggagaacatcagagcgctactagcagaggccaaacgcatcgccgat
ctatgtgaagaccccaaagagagggacgacatcctgcgctccatcagtgagatcgcaggc
ctcaccgccagactcgtggagctacgcaaacagggtaaaggtgacagcccggaggctcgt
gcattggcaaagcagatcggggcggcgctgctgaccctgcagtccaaaacaaaccgggct
gtggccaacatgagaccggccaaacctgccgtcactttggagggcaagatggagcaggcc
ctccgctgggtgaacaacccgggggtggacgacagaggagtaggtcaggcagcaatcaga
ggaatggtcggagaagggaagaggttggcaggaagcctgttaggcccgtatcggcaggat
atgattggacgctgtgaccgaacagaagctctaatggcatcgttggcagacatggccggc
aggggcgaggctgaggctcctcatgcacgagctacagctgcacagctacaggacagcctc
aaggacctgaggcagcacatgcaggaggtgatgacccaggaagtgtctgatgttttcagt
gacaccacgaccccaatcaaactgctggccgtggctgcaactgctcctcctgatgccccc
aacagagaggaggtttttgaagagcgtgcggggaactttgagacccacgcaggtcggctg
ggggcgaccgcagagaaggctgctgccgtgggaacagccaataagagcacagtggagggg
atacatgctgctgtgaaacatgccagggagctcacgccacaggtgacctgtgctgctcgg
atcttgctgaagaatcctggaaataaagcagcatacgagcactttgacaccatgaagaac
cagtggatcgacaatgtggagagactcactggtctggtggacgaggccatcgacaccaaa
tctctgctggatgcttctgaggaggccataaagaaagacatcgacaagtgccgagttgcc
atggcgaatgttcagccccaaatgcttgttgccggggcaacaagcatagcaagacgagct
aatcgggtcctgttggtggctaagagggaagtggagaactctgaagatccacggttcaga
gacacggtgaaacatgcgtcagacatcctctcccacaccatctcacccatggtgatggac
gccaaagcagtggctggaaacatacaagataaagctctgcaaaaggcctatttggactcg
tgtctgaggatcctggcttcagtcggaaaagtgagagaagccttccaacctcaggagcct
gacttccctcctccaccacccgacctagaccagctccatgttagtgatgagcaggcgcca
cccaagccccccttaccagagggcgaggtgcccccacctcggccccctcctccggaggag
aaggatgaagagttcccagagcagaaggctggagaggtgctcagcgagcccatgatggtg
gcggccaggcagctgcacgatgaggcgcgcaagtggtcgagcaagcctgaggatgaggag
gcagtagaggagagagaggtagatgatgaagatgagtttactgatggtgaggatgactat
gagccagagctgctgatgatgccctccaaccagcctgtcaatcaacccattctggcagcg
gcccagtctctccaccaggaggcgcgcaagtggtccagcaagggtaatgacattatagca
gcagccaagcggatggccctgctgatggcagaaatgtctcggctggtgcgtggcgggagc
gggaacaaacgagcgctgattcagtgtgccaaggacatcgccaaggcctcagatgaggtg
acgagactagctaaagaagtggccaagcagtgcaccgacagacgcatcagaactaacctg
ctgcaggtgtgtgaacggatccccaccatcagtactcagctgaagatcctctcgactgtc
aaagccactatgctgggacgaacaaacatcagtgaagaagagtcagagcaggccacagag
atgttggtccataacgcccagaatctaatgcagtcagtgaaggagaccgtcagggaagca
gaagcagcctccatcaagatccgcacagatgcaggatgcacccttcgctgggtgcgcaaa
accccctggtaccaataa
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