Epinephelus fuscoguttatus (brown-marbled grouper): 125903653
Help
Entry
125903653 CDS
T08419
Symbol
sorcs3b
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125903653 (sorcs3b)
Membrane trafficking [BR:
efo04131
]
Endocytosis
Others
Others
125903653 (sorcs3b)
Endosome - Lysosome transport
125903653 (sorcs3b)
Endosome - Golgi transport
125903653 (sorcs3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
125903653
NCBI-ProteinID:
XP_049456652
LinkDB
All DBs
Position
LG16:complement(17322632..17386710)
Genome browser
AA seq
1243 aa
AA seq
DB search
MGLWSFWSFSLLAFVLLYPFHPKFVAQAEISLPRANDRFYRLEVTPLEARITRKSTAVKV
DNITKVLRAFESEAAGALKPNNGNQEGNETKSGLGEEPLIGNKTAPNCHKIPGEKCANIS
EDNQRRPAANIMLENTFPDTRKRVKRSVGTAHTENVDRSISGEAQSKERFVEAVQGVANS
RPEYRRGGEDARGANPRQGEPHLDTSTFALSGDSAHNQAMVHWSGHNSSVILILTKLYDF
NLGAVTESSLWRSSDYGSTYTKLNDKVGSRTVLSYLYVCPTNKQKIMMLSDPEVESAVLI
SSDEGASFEKHPINFNILSLLFHPAQENWMLAYSHDSKLYSSMDFGRRWQLVHDNVMPGR
FYWAVMGLDRESDVVHIETRIAKGRAQYVKCRAQRCTEGSRLYLFPGHVDTNSLVVQDEY
VFTQVTKSGRASYFVSYMRESFKRMKLPKYCLPKDMHIISTDEKQVFAAVQEWNQNNTYS
LYISDSPGVYFTLSLENLRTSRGPAGNLLVDFYKVEGINGMYLANKLLDSHVKTFITYNK
GQTWALLPAPATDVAGNNLHCILPFCSLHLHLEMSENPYTSGPITSKKSVPGIIVATGNI
GTELSSTNLGMFITSDAGNSWRQIFDEEHNVWFLDNGGALLAVLHAATPIRHLWISLDEG
KKWDRHSFSLAPLYVDGVLMEPESDNHIITFFGHFSHRSEWQLIKIDYKGLFSRRCMDGD
YQTWHLHNKGELCVMGEKQIYMKRRPGNRCMLAQDYSRIYSSEPCLCTAYDFECDYGWER
QTDGKCSPAFWFNPNGVAKSCSTSQSFLNSTGYRKVLSNNCKEAGRNVYSPKRQLCRPRP
PRGLRLTTSQGELSATVGNNVTFMVYLEDGDSLRTSIQLDFGDGIKITYSNLSRTDDGIN
HIYRATGIYRVTASAENSQGSDSSTLFLHITSPVERIYLSTPIVAIRGKEVNLTALVWPS
HTRTLTFFWWFDNSSEPIITLEGSISYTFHREGKNKVTVQVASGSTIMQDSKVITVKEFF
RSLLLSFSPALDEHNPDIPEWREDIGRVVRTALSQVSGVPEDQLLVSLYPGLPSTAELFI
LPDEHTSSEHKRGSEDALETISDIFVTALNQGLIQFELKADVRIIVYMTQQTLAPLVDSN
SIHSGSAMLMLLTVVFVGLVAFFIYKFKRKIPWIHVQTEDSHEKEPEVISTVGQNDNMSK
VKLSEFPSQKELMEKELEARSRGGIGRNMERIVTREFPNCTNV
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgggactgtggtcattttggagtttttcccttttggctttcgtcttgctgtaccccttt
caccccaagtttgtggctcaagcggaaataagtttacccagagccaacgatagattttat
cgcctggaggtaacgccactggaggcacgtataacccgtaaatcaaccgcggtcaaagtg
gacaacatcacaaaagttttacgcgctttcgaatcggaggcagccggtgctttgaaaccg
aacaatggcaaccaagaggggaatgagacaaagagtggacttggagaggagccactgatc
ggcaacaaaacggcaccaaactgtcacaaaatacctggtgaaaagtgtgccaacatatcc
gaggacaaccagaggcgacctgcagcgaatataatgttagaaaacacatttcctgacaca
agaaagagggttaaaaggagtgtgggcacagcgcacaccgaaaatgtggataggagtata
agtggggaagcgcagtcaaaagagaggttcgtggaggctgtccaaggtgttgccaactcc
agacccgagtaccggcgcggcggggaagatgctagaggggctaacccgaggcagggtgag
ccgcacctggacacttctacttttgctctgtcgggagactccgcgcacaaccaggcgatg
gtgcactggtccggacacaacagcagcgtgatcctgatcttgactaagctgtatgacttc
aacctgggggctgttactgagagctcactctggagatcctctgattatggaagcacctac
accaaactcaacgacaaagtgggctcaaggacggttttaagttacctgtacgtctgcccg
accaacaaacagaagataatgatgcttagcgacccagaggtagagagcgctgttctcatc
agttcagatgaaggggcaagctttgagaagcatcccattaacttcaatatcctgagcctg
ctcttccatcctgcacaggagaactggatgctggcttacagtcatgacagcaagctgtac
agttcgatggactttggaaggaggtggcagcttgtccatgacaacgtgatgccaggccgg
ttctactgggcggtaatggggctggacagagaatcagatgtggtccacatcgagacgcgc
atcgcgaaaggccgcgcccagtacgtgaagtgcagagcccaacgctgcacagaaggcagc
cgactgtacctcttccctggacatgtagacaccaactcgctggttgtgcaggatgaatat
gttttcacacaggtaaccaagtcaggacgagccagctacttcgtctcctacatgagagag
tccttcaagcggatgaaattgcctaaatattgtcttccgaaggacatgcatatcatcagt
acagatgagaagcaggtatttgctgcagtccaggagtggaatcagaacaacacttacagc
ctgtatatctcagactcccccggggtctactttaccctttcattagagaatctgagaacc
agcagaggacctgccggtaacctactggttgacttttataaggttgaggggataaatggc
atgtatctcgccaacaaactgctggacagccatgtcaagactttcatcacatacaacaag
ggacaaacatgggccctgctgccagcccctgccactgatgtggctggaaacaaccttcac
tgcattctgccattttgttcgctgcatcttcatctggagatgtcggaaaatccctacacg
tccggacccatcaccagcaagaagtccgtgccgggaatcatcgtggctacagggaatatc
ggaacagaactgtcctccactaaccttgggatgtttataacatctgatgcagggaatagc
tggagacagatttttgatgaagagcacaacgtttggtttcttgacaatggaggggctttg
ctggcggtgttgcacgcagcgacgcctattcgacacttatggatcagtctagacgaagga
aaaaaatgggaccgccacagcttctccttggcacctctgtatgtggacggagttttaatg
gagccagaatctgacaatcacattatcactttctttggacactttagtcatcgatcagag
tggcaactgatcaagatcgactacaagggcctctttagtaggagatgcatggatggagat
tatcagacatggcaccttcacaacaagggagagctgtgtgtgatgggcgagaagcagatc
tatatgaagcgcaggccaggcaaccgttgcatgctggcccaggactattcgaggatctat
tcctcagagccatgcctctgcacagcctatgattttgaatgtgattatggttgggaacgc
cagaccgacggcaagtgctcccctgctttttggtttaatccaaacggtgtggctaaaagc
tgcagcaccagccaaagctttcttaacagcacagggtatcgtaaagttttgtccaataac
tgtaaggaggctgggagaaatgtgtactcgcccaagaggcagttgtgtcgccccagacca
cccagaggcctccggctgaccaccagtcaaggggagctcagtgccactgttggaaacaac
gttaccttcatggtctacctcgaagatggagactcgctgaggaccagcatccagctcgac
ttcggggatggcatcaagatcacatactctaacctgagcaggaccgatgatggcatcaac
cacatctacagagcaactgggatttaccgagtgacagcatctgccgaaaacagccaggga
tctgacagcagcacgctgtttttacacatcaccagtccagtggagcgtatatacctctcc
actcctattgtagccatcagggggaaggaggttaatctgactgcgttggtatggccgagt
cacaccagaacattgaccttcttctggtggtttgacaacagctccgagcccattataacc
ttggagggaagcatctcatacacatttcacagagaaggaaaaaacaaggtcacggtccag
gttgcttctgggagcaccataatgcaggattcaaaagttataactgttaaagagttcttc
aggtcgctgctgttgtcgttctcaccagctcttgatgaacacaaccctgacatccccgag
tggagggaggacatagggcgtgtggtgcggacagctctgtcacaggtgtctggggttcct
gaagatcagctgctggtgtctttgtatcctggacttccatccacagcagagctcttcatc
ctgcctgacgagcatacgtcaagtgagcacaagagaggaagtgaggacgctttagagacg
atatcagatatttttgtcaccgccctgaaccaaggcctgatccagtttgagctgaaagcg
gatgttcgcattattgtgtacatgactcagcaaactttggcaccacttgtggattcaaac
tccatccacagtgggtcggccatgctgatgctgctcactgtggtgtttgttggtttagtg
gcattcttcatctacaagttcaaaaggaaaatcccttggatccatgttcagactgaagac
agtcatgagaaggaaccggaggtgatcagtacagtcggacagaacgacaacatgtccaag
gtcaagctcagtgaatttccctctcagaaagaactcatggaaaaggagttggaggccagg
agcagaggaggaattggaagaaatatggagagaattgtcacaagggaatttccaaactgt
actaatgtctga
DBGET
integrated database retrieval system
