Epinephelus fuscoguttatus (brown-marbled grouper): 125903694
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Entry
125903694 CDS
T08419
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125903694 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efo03021
]
125903694 (polr1b)
Enzymes [BR:
efo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125903694 (polr1b)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
125903694 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
125903694
NCBI-ProteinID:
XP_049456734
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All DBs
Position
LG16:30472308..30479962
Genome browser
AA seq
1134 aa
AA seq
DB search
MDPSEKWSNLPKAPSLRNLTEGRFGLLKERQHAAVQDLTKAHIESFDQAVTDGLNRVVQA
IPPLEFTFKNDRISLSFVEATIYNPVVAKGNICRDMKVFPAECRGRKCTYKGKLVADVSW
SINGVPKGMIKQSMGHVPIMVKSKLCNLHGMSPKELVEHHEEAEEMGGYFIVNGNEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQYGISMRCVKEEHTAVNMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKSCASEMLRIVAEEGCITRSKV
LNYLGERFRVKMNLPEWYTNEQCANFLLDECICIHLKSDMEKFYLLCLMTRKLFTFAKEE
CMEENPDSIMCQEVLTPGQLYLMFMKERMSAWLTSVKLSFDKRGSRLSGGWTAENVMKIF
NMGTDLTKPFEYLLATGNLSSKSGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAICEIVAPTLSTTSLPALLCSLGVT
PVDGSPGQAFSDCYPVVLDGAVVGWVETELAPVVVDSLRRFKVLKEKKIPPWTEIVLVPK
TGKASLYPGLFLFTAPCRMMRPVRNLALGKQELIGTFEQLYINVGILENEIEPGVTTHQE
LFPHSMLSVVASFIPYSDHNQSPRNMYQCQMSKQTMGFPLHSFMNRSDNKLYRLQTPQSP
MVRPCMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LAEKVRGEDSVVFGTKPGDPKINERLDADGLPFIGSTLKYGDPFYSYINLNTGQSFVNFY
KSQEACVVDNIKICSNDNGSGRFKRVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMAPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEENSALEY
FGELLRAGGYNYYGTERLYSGVSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLL
EKPPPYWSAMRHRKTVCTLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacccttcagaaaagtggagtaatttgcccaaagctccgagtctgaggaatctgaca
gagggaaggtttggtctcctgaaggagcgtcaacatgctgctgtgcaggatctgaccaaa
gctcacatcgagtcctttgaccaggctgtcactgacggactcaaccgcgtcgtgcaggcc
atccctcccttggagttcacattcaaaaatgacaggatcagcctttccttcgtcgaagcc
accatctacaacccagtggtggccaaagggaacatctgcagggacatgaaagtgtttcca
gcagagtgcagaggaagaaagtgtacatacaaaggaaagctggtggcagatgtcagctgg
tcaatcaacggagttcccaaaggcatgatcaagcagtccatgggtcacgtgccaatcatg
gtgaagtccaagctgtgtaacctgcacggcatgtctcccaaagaactcgtagagcaccat
gaagaagcagaggaaatgggaggttatttcatagtgaatggaaatgagaaagttatccgc
atgctgattatgccacggaggaattatcccattgccatgtcaagacccaagtggaagagc
agaggccagggatacactcagtatggtatttccatgcgttgcgtgaaggaggaacacaca
gccgtcaacatgaacctgcattacctggaaaacgggacggtgatgctgaacttcatttac
cagaaagagctcttcttcctcccacttggctttgcactcaaggccctcgtagacttcaca
gactttcagatctaccaggagctgatcaaaggccgtgaggacaattccttctataagagc
tgtgcgtctgaaatgttgcgcattgtcgcagaggagggctgcatcacccgcagcaaggtg
ctaaattacctgggagagcgcttcagggttaagatgaaccttcctgagtggtacacaaac
gagcagtgcgccaacttcctgctagatgagtgcatctgtatccacctgaagtcagacatg
gagaagttctacctgctgtgtctcatgaccaggaagcttttcacgtttgccaaggaggag
tgcatggaggaaaaccctgacagcatcatgtgtcaggaagtgctcactcctggtcagctc
tacctcatgtttatgaaggagagaatgtctgcctggttgacatctgtgaagctgtccttt
gacaagagaggcagcagactgagtggaggatggacggctgagaacgtgatgaagatattc
aacatgggcactgacctgaccaaaccctttgaatatctgctggccactgggaacctcagc
tctaagtctggtcttggaatgctgcagaacacaggcctgtgtgtggtagctgacaagctc
aacttcatccgctacctgtcccacttccgctgtgtgcacagaggagcagcattcgccaag
atgaggaccacctctgttcgtaagctgctgcccgagtcctggggcttcctgtgtcccgtc
cacactccagacggagagccatgtggactcatgaaccacatgacagccatctgtgagatt
gtggcaccaaccttgtccaccacctccctgcctgctctgctctgttccctcggtgttact
ccagtggatggatctcctggccaggccttttcagactgctaccctgtggtcctggatggg
gccgtcgtaggctgggtggagactgaattagccccagttgtggtcgactcactgcggagg
tttaaggtgctgaaagagaagaagatccctccctggactgagattgttctggtgccaaaa
acaggcaaggccagcttgtacccaggcctgttcctcttcacagcaccctgccgtatgatg
cggcccgtacgcaacttagctcttggcaagcaagagttgatcggcacctttgaacaactt
tacatcaacgtgggcatcttagagaatgagatcgagccaggtgtgaccacacaccaggag
ctcttcccgcacagtatgctcagcgtggtggctagcttcattccttactcagaccacaac
cagagtcctaggaacatgtaccagtgtcagatgagtaagcagactatgggtttccccctg
cactcattcatgaatcgctcggataacaagctgtaccgactccagaccccacagagcccc
atggtcaggccctgcatgtatgaccattacaacctggacaactaccccagtggcacaaac
gccatagtggctgtcatatcctacacaggctacgacatggaggatgccatgattgtaaac
aagtcgtcatgggagaggggctttgcacacggaagtatctataagactgagctggtggac
ctggcagagaaagtgaggggagaagacagcgtggtgtttgggaccaagccaggtgaccct
aaaataaatgaaagactggacgctgatggactgccattcattgggtcgacactgaagtat
ggagacccattttacagctacatcaacctaaacactggccagtcctttgtcaacttctac
aagagccaagaggcctgtgtggtcgacaatataaagatctgcagcaatgacaatggctcg
ggccgttttaaacgtgtctgcatcacaatgcgagtgccacgaaaccccaccattggtgac
aagttcgctagtcgccacggtcagaagggtattctgagccgcctgtggccggccgaggac
atgcccttcacagagagcggcatggctcccgacatcctcttcaacccccacggcttcccc
tcccgtatgaccatcgggatgctgattgagagcatggccggcaagtccggcgccctacac
ggcctgagccacgacgccacacccttcaccttctcagaagagaactccgcactggagtat
tttggcgaattgctccgggcaggtggatacaattactacggcacagagcggctctacagc
ggagtgagcggtctggagctagaggccgacatcttcatcggagtcgtctactaccagcgg
ctacgtcacatggtctccgacaagttccaggtgaggaccacgggagcacgtgataaggtg
accaaccagccagtgggagggaggaacatccagggaggcatccgttttggggagatggag
cgagacgccctgctggcccatggctcttcattcctgcttcatgatcgcctcttcaactgc
tcagaccgatcagtggctcaggtgtgtgttgactgtggcagcctgctctcccctctgttg
gagaaaccgccaccctactggtcggccatgcgtcatcgcaagactgtctgcactctgtgt
ggtaaaagtgactctattgactcggtgtctgtcccgtacgtcttccgctactttgtagcc
gagctcgcagcaatgaacatcaaagtcaaattagatgttaagtga
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