Epinephelus fuscoguttatus (brown-marbled grouper): 125903731
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Entry
125903731 CDS
T08419
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125903731
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
efo04812
]
125903731
Enzymes [BR:
efo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
125903731
Membrane trafficking [BR:
efo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
125903731
Cytoskeleton proteins [BR:
efo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
125903731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_22
TIP49
MIT
AAA_5
AAA_16
AAA_14
Mg_chelatase
IstB_IS21
AAA_24
DUF815
nSTAND3
NPHP3_N
AAA_2
AAA_33
DUF1771
AAA_19
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
125903731
NCBI-ProteinID:
XP_049456793
LinkDB
All DBs
Position
LG16:27422591..27427513
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AA seq
478 aa
AA seq
DB search
MSAKTMASKGKDSGEVIKNYHKQAFEYVSKALRIDEDDSAEKEEAVQWYKKGISELEKGI
AVEITGQGEHYDRAKRLQDKMVTNLTMAKDRLALLEATMAAKRRSDPQKTSNHVLPQPKP
VPKSQPAVRGVSTNIRPSSAVRPPSRSTDPKVTPRVGKAQNGKPTTVRQPPKRDMRNFKN
VDSKLANLILNEIVDNGATVSFEDIAGQDLAKQALQEIVILPALRPELFTGLRAPARGLL
LFGPPGNGKTMLAKAVAAESKATFFSISAASLTSKYVGEGEKLVRALFAVARELQPSVIF
IDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDEAVLRR
FAKRVYVALPDAETRFTLLKNLLGKHGNPLSKSELTHLAKATSGYSGSDLTSLAKDAALG
PIRELGPDQVRSMAASEMRNIKVKDFEDSLKRIKPSVSPATLNMYTKWNKDFGDTTAF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccaaaacaatggcaagtaaaggcaaagacagcggtgaagttatcaaaaactac
cataaacaggcgtttgagtatgtatcgaaggcattaaggatcgacgaagatgattcagca
gagaaagaggaggctgtgcagtggtacaaaaaggggatatctgagcttgaaaagggtatt
gcagtagagatcacgggacaaggagagcactatgacagagcaaagagactccaagataaa
atggtcaccaatctcaccatggctaaagataggcttgctttattagaagcaacaatggca
gctaaaaggagaagtgatccacagaagacctcaaaccatgttcttccacaaccaaagcct
gtgcctaaaagccagcctgcagtgcgaggtgtgtccactaacatcaggccctcctctgct
gtcagacccccatccagatccactgatccaaaggtgaccccacgggtgggaaaagctcaa
aacggaaaacctacaactgtgagacagcccccgaagagggatatgagaaacttcaagaat
gtggacagcaaactggccaacttgattctgaatgaaattgttgacaatggagcgactgta
tccttcgaagacattgcaggacaggacctggccaagcaagcactccaagagattgtcatc
ctccctgccttaagaccagagctctttactggcctgagagctccagcacgtggtttgctt
ttatttggccctcctggcaatggaaaaaccatgctggccaaagcagtcgcagcggagtca
aaagccacattcttcagcatcagtgccgccagtttgacctccaaatatgtgggagagggc
gagaagcttgtccgagcgctgtttgcggttgccagagaattgcagccctcggtcatcttc
atcgatgaagttgacagcttgctctgtgaaaggagggagggagaacatgatgcctctcgt
cgattaaaaaccgagttcctcattgagtttgacggggtgcagtcaggaggagatgacagg
gtgctcgtaatgggagcgaccaacaggcctcaggagctcgatgaagcagtactgaggcgc
tttgcaaaaagggtttatgtggctttgccggatgcggagacaagattcacgctgctcaag
aaccttttaggaaagcacgggaatccactcagcaaaagtgagctgacccatctcgcaaaa
gcgacttcgggatattcaggaagtgatctcacgtcattagccaaagatgctgcgcttggg
ccgatcagagagttgggaccagaccaagtccgaagtatggctgctagtgagatgcgtaac
atcaaggtgaaagactttgaggattccctgaagcgcattaaacccagtgtcagcccagca
actcttaatatgtataccaagtggaacaaagattttggtgacacaacagctttttga
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