Epinephelus fuscoguttatus (brown-marbled grouper): 125903889
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Entry
125903889 CDS
T08419
Symbol
srfb
Name
(RefSeq) serum response factor b isoform X1
KO
K04378
serum response factor
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125903889 (srfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125903889 (srfb)
Transcription factors [BR:
efo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
125903889 (srfb)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
125903889
NCBI-ProteinID:
XP_049457029
LinkDB
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Position
LG16:28839957..28867664
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AA seq
598 aa
AA seq
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MLPSRVGSAPSGNGSASGRGTTGHGSGVVGIRPVLVRTGQALPGVSESAGAAGRQGERDA
VGMLGANGPGGPRGARPGNGTGVTPLQTAVQGNMVVGLNTGVVLPHGARFDPDREGAPLC
SGSDNDSDSGDDDDPVGSLGDSRRGVKRERGEMEAAVTGQEVGIPPGGYGMVPGGVAGAK
PGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVY
TFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESES
MGDTKDTLKPTFTVASLPGSTSSTQCTVPTTSTTMQVSSGPSFPITNYLAPISASSNVSA
NGTVLKTTGASAGVMQLPGGFTFMPAGTPLPPGTPTIPLSQLQQHSLALQGQHGQALAAA
PQQGQQAVFRFPAAVSLTGTGVPQQLQAIQVHPNTQSTSNSDSSPDISHTSTNSTATVSL
PATIVTSSVPTSVAGHMMYPSPHTVMYASTPGLADGGLAVLNAFSQGTSAMQVSHAQAQD
TGSVPQVFLTAPPGTVQIPVSAVQLHPMVIGQQSSGSSSNLTELQVVNLDAAQNSKGD
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccgggttggatcggcaccatctggaaacgggtcagcgtcaggcagaggt
accacaggacacggttcgggggttgtcgggatccgtcccgttttagtcagaacagggcaa
gctttaccgggggtcagcgagagtgccggtgctgccgggcgacagggggaaagagacgcc
gtcgggatgctgggggctaatggtccagggggtccgagaggcgcgagaccggggaacggg
actggtgtgacccctctacagaccgccgtccagggtaacatggtggtggggttgaacacg
ggagttgtgttgcctcatggagccaggttcgaccccgacagagagggtgcgcctctgtgc
agcggctcggataatgactcggactccggagatgatgatgacccagtgggttcactcggg
gacagcaggagaggggtgaagcgggagagaggggagatggaggctgcggtgacggggcag
gaggtggggattcctcccggaggttacggcatggtgcccggaggggtcgccggggcaaag
ccagggaagaaaacacgtgggcgcgtaaagataaagatggaatttattgacaacaagttg
agacggtacaccactttcagcaagaggaagactggtattatgaaaaaggcctatgaactc
tccaccctgacgggaacccaggttctgcttcttgtggccagtgaaacgggacatgtctac
acttttgccactcgcaaactccaacccatgatcacaagtgaaacgggcaaagccctgatc
caaacatgcctcaactcgccggactcgccaccacgctctgacccctctacggaccagcgc
atgagtgctacgggctttgaggagacagacctcacctaccaggtgtctgagtcggagagc
atgggcgacacaaaggatacacttaagccgacgtttacggtagccagcctaccaggcagt
accagcagcacccagtgcacagtgcccaccacctccaccaccatgcaggtgagcagtggg
ccttcgtttcccatcaccaactacctggcacccatctcggccagcagcaacgtcagcgcc
aacggtaccgtcctcaagaccaccggcgcctcagcgggggttatgcagctgcccggaggc
tttactttcatgcctgcaggcactcctctcccccccggcacccccaccattcctctgagc
cagttgcagcagcactccctggccctccaggggcagcatggtcaggccctggccgccgcc
ccacagcagggacagcaggctgtcttccgcttccctgctgctgtctccctcacaggcacg
ggggttccccagcagctccaggcgatccaggtccaccccaacacccagtccacctccaac
agtgacagcagcccggacatctcccacacctccacaaactccaccgcaacagtgagtctc
ccagcaaccatcgtcacctcgtcagtgccaacgtctgttgcgggtcacatgatgtacccc
agcccccacacagtgatgtacgcctccacgccggggctggctgacggggggctggccgtg
ctcaacgccttctcccagggcacctcagccatgcaggtttcccacgcacaggcccaagac
acaggttctgtccctcaggtgttcctcacagcacctccaggcacggtgcagatccccgtc
tcagcggtgcagctacacccaatggtgattggccagcagtcgagcggcagcagcagtaac
ctgacggagctccaggtggtcaacctggacgcagcacagaactcaaagggcgactga
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